Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M01
(1173 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 32 0.037
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.11
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 30 0.15
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 3.2
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 4.3
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 7.5
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 24 7.5
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 24 9.9
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.037
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +2
Query: 647 QQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAG---NQEKFQQLESAI 817
QQ E + +++ +A K DE L++M +L + ++ ++K++ N+++ QQL +
Sbjct: 715 QQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVV 774
Query: 818 QE------KLQQAXDRRLLIEAXXXEKLRNHNIKLAEVR 916
E L++ + I A + + KL +VR
Sbjct: 775 FEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Score = 28.3 bits (60), Expect = 0.46
Identities = 25/118 (21%), Positives = 53/118 (44%)
Frame = +2
Query: 533 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 712
L++ +E+ + +L R + H++ +++ LT EQQ ++ + + T R+
Sbjct: 728 LNSAYAKEDERLQEMTRKLHQR-QQHMKKLQQELLTNEQQLQQLAGVVFEGETEETTLRE 786
Query: 713 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAXDRRLLIEAXXXEKLR 886
E +E R +++K Q K Q+ +Q++ Q A ++ + A E R
Sbjct: 787 E-----LEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEAEIAR 839
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.11
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +2
Query: 548 ETHEEKREAYINELRSRLKDHLEGVEK---TRLTLEQQTAEVYKAIEDKMTTAADKRDE- 715
E + +K + IN + ++ + K R LE++ ++ + +E+ M A +K E
Sbjct: 927 ERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEE-MKLAIEKAHEG 985
Query: 716 --NLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAXD 844
++KK I L++ E + + R +F+Q+ I+ KLQ+ D
Sbjct: 986 SSSIKKEIVALQKREAEGKMKRL----EFEQILQTIETKLQETKD 1026
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.15
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +2
Query: 533 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 712
+D+ ++ + A +SRLK E K + +T E E+ + A
Sbjct: 126 IDSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVI--RTEEYIPTQEELLEEAEITER 183
Query: 713 ENLKKMIERLREHEEQVRKVRAGNQE 790
EN+K + ER R E + +K+R N++
Sbjct: 184 ENIKSL-ERFRRMELEKQKIRPTNKK 208
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 25.4 bits (53), Expect = 3.2
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 451 SEDGQDRGSVSHPQRADE*--LHRRYQGGARRQDGDPRGKTRGLHQR 585
++ G + V+ PQ++ + HR++Q +Q+G + + G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.0 bits (52), Expect = 4.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 479 SRIRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 655
S+ R + + + +E L DAK++ HE+ R E+ K + GV + + Q T
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPT 535
Query: 656 AEVYKAIEDKM 688
+ Y K+
Sbjct: 536 HKRYNVAVTKV 546
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 7.5
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Frame = +2
Query: 560 EKREAYINELRSRLKDHLE-GVEKTRLTLEQ--QTAEVYKAIEDKMTTAADKRDENLKKM 730
EK++A +NEL + +++ +E +EK R E + +V + IE R L K
Sbjct: 186 EKKDAKLNELYAVIREEIEPKLEKLRKEREHYIEFQKVCRDIEYLTRLYVSYRYLQLCKG 245
Query: 731 IERLREHEEQVRKVRAGNQEKFQQLES--AIQEKLQQ 835
+E E E + +++ E Q++ES A + L+Q
Sbjct: 246 VE---ESERTIANLQSVIGESEQKIESNCATAQTLEQ 279
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 24.2 bits (50), Expect = 7.5
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 562 KTRGLHQRAA-LPSQGSS*GC*EDQVDPGTADRGSVQ 669
+TR + +R LP +G+ G PGT DR S+Q
Sbjct: 2 ETRSMRKRTTRLPEEGAPTGA-----GPGTGDRASIQ 33
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.8 bits (49), Expect = 9.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 641 LEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 748
L+ + + K +E + T + D+N KK IER E
Sbjct: 36 LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEE 71
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,527
Number of Sequences: 2352
Number of extensions: 13462
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132434028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -