Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L24
         (1122 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.     30   6.6  
AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA...    30   6.6  

>AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.
          Length = 1133

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 142 AGRRTGPTRPQPHVGAVXMHRGXPWHSP 59
           AG  TGP +  P +G   MH    WH P
Sbjct: 703 AGFNTGPPQTSPQLGGGGMHSLAKWHIP 730


>AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA
           protein.
          Length = 1133

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 142 AGRRTGPTRPQPHVGAVXMHRGXPWHSP 59
           AG  TGP +  P +G   MH    WH P
Sbjct: 703 AGFNTGPPQTSPQLGGGGMHSLAKWHIP 730


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,760,395
Number of Sequences: 53049
Number of extensions: 539812
Number of successful extensions: 906
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5862306198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)