Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L23
(1192 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E47F16 Cluster: PREDICTED: similar to ribosomal ... 155 3e-36
UniRef50_P61513 Cluster: 60S ribosomal protein L37a; n=137; Euka... 152 2e-35
UniRef50_O96184 Cluster: 60S ribosomal protein L37a; n=37; Eukar... 140 5e-32
UniRef50_Q7RAQ3 Cluster: Ribosomal L37ae protein family, putativ... 131 4e-29
UniRef50_Q6C3I3 Cluster: Similarity; n=2; Dikarya|Rep: Similarit... 131 4e-29
UniRef50_Q00VK4 Cluster: 60S ribosomal protein L37; n=1; Ostreoc... 116 1e-24
UniRef50_A0E0Z9 Cluster: Chromosome undetermined scaffold_72, wh... 109 1e-22
UniRef50_Q7S1Z1 Cluster: Putative uncharacterized protein NCU075... 101 5e-20
UniRef50_Q8TYC3 Cluster: 50S ribosomal protein L37Ae; n=4; Eurya... 79 3e-13
UniRef50_Q6M0M1 Cluster: 50S ribosomal protein L37Ae; n=6; Metha... 76 2e-12
UniRef50_O74106 Cluster: 50S ribosomal protein L37Ae; n=7; Eurya... 75 5e-12
UniRef50_O30179 Cluster: 50S ribosomal protein L37Ae; n=3; cellu... 73 1e-11
UniRef50_Q9YC06 Cluster: 50S ribosomal protein L37Ae; n=9; Archa... 70 1e-10
UniRef50_Q8ZVN1 Cluster: 50S ribosomal protein L37Ae; n=7; Therm... 69 3e-10
UniRef50_Q6L225 Cluster: 50S ribosomal protein L37Ae; n=4; Therm... 69 3e-10
UniRef50_Q74N55 Cluster: 50S ribosomal protein L37Ae; n=1; Nanoa... 68 4e-10
UniRef50_P60619 Cluster: 50S ribosomal protein L37Ae; n=5; Halob... 64 5e-09
UniRef50_A7I9C5 Cluster: Ribosomal protein L37a; n=1; Candidatus... 63 1e-08
UniRef50_Q0W2Y6 Cluster: 50S ribosomal protein L37AE; n=6; Eurya... 59 2e-07
UniRef50_Q3LWL0 Cluster: Ribosomal protein L37ae; n=1; Bigelowie... 59 3e-07
UniRef50_A7DRS5 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 1e-05
UniRef50_A0RXT9 Cluster: Ribosomal protein L37AE/L43A; n=1; Cena... 48 4e-04
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 45 0.004
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 43 0.018
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 42 0.024
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.073
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 40 0.17
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.17
UniRef50_A2Q538 Cluster: Ribosomal L37ae protein; n=1; Medicago ... 39 0.22
UniRef50_UPI00015B4280 Cluster: PREDICTED: similar to ENSANGP000... 35 3.6
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 8.3
>UniRef50_UPI0000E47F16 Cluster: PREDICTED: similar to ribosomal
protein L37a; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ribosomal protein L37a -
Strongylocentrotus purpuratus
Length = 141
Score = 155 bits (375), Expect = 3e-36
Identities = 68/89 (76%), Positives = 80/89 (89%)
Frame = +3
Query: 87 AKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCK 266
AKRT+KVGITGKYGTRYGASLRKMVKK+E++QH K TC FCGKD+MKR VGIW CK C+
Sbjct: 51 AKRTRKVGITGKYGTRYGASLRKMVKKIEISQHGKCTCVFCGKDSMKRKVVGIWHCKICR 110
Query: 267 RTVAGGAWVFSTTAASSCRSAVRRLREVK 353
+TVAGGAWV+STTAA++ RS VRRLRE++
Sbjct: 111 KTVAGGAWVYSTTAAATVRSVVRRLREMQ 139
>UniRef50_P61513 Cluster: 60S ribosomal protein L37a; n=137;
Eukaryota|Rep: 60S ribosomal protein L37a - Homo sapiens
(Human)
Length = 92
Score = 152 bits (368), Expect = 2e-35
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 84 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 263
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 264 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 353
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>UniRef50_O96184 Cluster: 60S ribosomal protein L37a; n=37;
Eukaryota|Rep: 60S ribosomal protein L37a - Plasmodium
falciparum (isolate 3D7)
Length = 96
Score = 140 bits (340), Expect = 5e-32
Identities = 59/90 (65%), Positives = 74/90 (82%)
Frame = +3
Query: 84 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 263
M++RTKKVG+TGKYGTRYG+SLRK +KK+E+ QHAKY C+FCGK A KR+CVGIW CK+C
Sbjct: 1 MSRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKC 60
Query: 264 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 353
KR V GGAW +T AA + +S + RLR+ K
Sbjct: 61 KRKVCGGAWSLTTPAAVAAKSTIIRLRKQK 90
>UniRef50_Q7RAQ3 Cluster: Ribosomal L37ae protein family, putative;
n=1; Plasmodium yoelii yoelii|Rep: Ribosomal L37ae
protein family, putative - Plasmodium yoelii yoelii
Length = 116
Score = 131 bits (316), Expect = 4e-29
Identities = 55/84 (65%), Positives = 67/84 (79%)
Frame = +3
Query: 102 KVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAG 281
KVG+TGKYGTRYG+SLRK +KK+E+ QHAKY CSFCGK A KR+CVGIW CK+CKR G
Sbjct: 27 KVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCSFCGKTATKRTCVGIWECKKCKRKTCG 86
Query: 282 GAWVFSTTAASSCRSAVRRLREVK 353
GAW +T AA + +S + RLR+ K
Sbjct: 87 GAWSLTTPAAVAAKSTIIRLRKQK 110
>UniRef50_Q6C3I3 Cluster: Similarity; n=2; Dikarya|Rep: Similarity -
Yarrowia lipolytica (Candida lipolytica)
Length = 121
Score = 131 bits (316), Expect = 4e-29
Identities = 54/87 (62%), Positives = 70/87 (80%)
Frame = +3
Query: 90 KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKR 269
KRTKKVGITGKYG RYG+SLR+ KK+E+ QH++Y C+FCGK ++R VGIW+C CK+
Sbjct: 32 KRTKKVGITGKYGVRYGSSLRRQCKKLEIQQHSRYDCTFCGKTTVRRGAVGIWTCSACKK 91
Query: 270 TVAGGAWVFSTTAASSCRSAVRRLREV 350
TVAGGA+ ST A++ RS +RRLRE+
Sbjct: 92 TVAGGAYTVSTATANTVRSTIRRLREL 118
>UniRef50_Q00VK4 Cluster: 60S ribosomal protein L37; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L37 -
Ostreococcus tauri
Length = 133
Score = 116 bits (279), Expect = 1e-24
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = +3
Query: 108 GITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGA 287
GI GKYGTRYGASLRK+VKK EV+QH+K+ C FCGK MKR VGIW CK C +T AGGA
Sbjct: 50 GIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCNKTKAGGA 109
Query: 288 WVFSTTAASSCRSAVRRLRE 347
+ +T + + RS +RRLRE
Sbjct: 110 YSLNTGGSVTVRSTIRRLRE 129
>UniRef50_A0E0Z9 Cluster: Chromosome undetermined scaffold_72, whole
genome shotgun sequence; n=10; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_72,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 145
Score = 109 bits (262), Expect = 1e-22
Identities = 46/90 (51%), Positives = 65/90 (72%)
Frame = +3
Query: 84 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 263
M K+TKKVGITGKYGTRYGASLRK++KK E++QH +Y +F G ++KR +GIW C +
Sbjct: 1 MTKKTKKVGITGKYGTRYGASLRKIIKKFEISQHQRYFNTFTGAHSLKRQAIGIWRCTQT 60
Query: 264 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 353
+AGGAW +T A S + + R++++K
Sbjct: 61 GLQIAGGAWEVNTPAGLSAKQGMLRIKKLK 90
>UniRef50_Q7S1Z1 Cluster: Putative uncharacterized protein
NCU07562.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU07562.1 - Neurospora crassa
Length = 137
Score = 101 bits (241), Expect = 5e-20
Identities = 45/73 (61%), Positives = 60/73 (82%)
Frame = +3
Query: 132 RYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAA 311
RYGASL++ EV+QHA+YTC+FCGK+ ++RS VGIWSCK CK+T+AGGA+ ST AA
Sbjct: 67 RYGASLQQ-----EVSQHARYTCTFCGKNTVRRSSVGIWSCKACKKTLAGGAYTVSTPAA 121
Query: 312 SSCRSAVRRLREV 350
++ RS +RRLRE+
Sbjct: 122 AAMRSTLRRLREI 134
>UniRef50_Q8TYC3 Cluster: 50S ribosomal protein L37Ae; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L37Ae -
Methanopyrus kandleri
Length = 89
Score = 78.6 bits (185), Expect = 3e-13
Identities = 37/87 (42%), Positives = 49/87 (56%)
Frame = +3
Query: 93 RTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRT 272
RTKKVG G++G RYG +R+ V ++E Q K+ C C K A+KR GIW C +C
Sbjct: 3 RTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAE 62
Query: 273 VAGGAWVFSTTAASSCRSAVRRLREVK 353
GGA+ T A R A+R+ E K
Sbjct: 63 FTGGAYYPETEAQRIVRRAIRKALEEK 89
>UniRef50_Q6M0M1 Cluster: 50S ribosomal protein L37Ae; n=6;
Methanococcales|Rep: 50S ribosomal protein L37Ae -
Methanococcus maripaludis
Length = 96
Score = 76.2 bits (179), Expect = 2e-12
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +3
Query: 96 TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTV 275
TKK+G G++G+RYG +R ++ +E+ Q+ Y C C +KR+ IW C++C +
Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQNKDYKCPVCAFPKLKRAGTSIWVCEKCGAKI 66
Query: 276 AGGAWVFSTTAASSCRSAVRRLREVK 353
AGGA+ T A A+RR+ E K
Sbjct: 67 AGGAYTPETGAGKVVTKAIRRVIESK 92
>UniRef50_O74106 Cluster: 50S ribosomal protein L37Ae; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L37Ae -
Pyrococcus horikoshii
Length = 83
Score = 74.5 bits (175), Expect = 5e-12
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = +3
Query: 96 TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTV 275
TKKVG G++G RYG +R+ V +E K+ C CG+ A+KR GIW C +C
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTGIWQCTKCGAIF 63
Query: 276 AGGAWVFSTTAASSCR 323
AGGA++ T A R
Sbjct: 64 AGGAYLPVTPAGKVAR 79
>UniRef50_O30179 Cluster: 50S ribosomal protein L37Ae; n=3; cellular
organisms|Rep: 50S ribosomal protein L37Ae -
Archaeoglobus fulgidus
Length = 83
Score = 72.9 bits (171), Expect = 1e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +3
Query: 93 RTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRT 272
RTKKV G++G RYG +R+ ++E Q KY C CGK A+KRS GIW C+ C
Sbjct: 3 RTKKVRSAGRFGPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCGYK 62
Query: 273 VAGGAW 290
AGG +
Sbjct: 63 FAGGCY 68
>UniRef50_Q9YC06 Cluster: 50S ribosomal protein L37Ae; n=9;
Archaea|Rep: 50S ribosomal protein L37Ae - Aeropyrum
pernix
Length = 86
Score = 70.1 bits (164), Expect = 1e-10
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 93 RTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGK-DAMKRSCVGIWSCKRCKR 269
RTK VG G+YG RYG S+RK V+ + ++ + C FCG ++R VG+WSC++C
Sbjct: 3 RTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKCGN 62
Query: 270 TVAGGAW 290
T AG A+
Sbjct: 63 TWAGAAY 69
>UniRef50_Q8ZVN1 Cluster: 50S ribosomal protein L37Ae; n=7;
Thermoproteales|Rep: 50S ribosomal protein L37Ae -
Pyrobaculum aerophilum
Length = 101
Score = 68.5 bits (160), Expect = 3e-10
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 96 TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFC-GKDAMKRSCVGIWSCKRCKRT 272
TK VG G+YG RYG LR+ V +EV Q K+ C C ++R GIW C +C T
Sbjct: 6 TKIVGPAGRYGARYGMGLRRKVTAIEVKQRGKHRCPSCRSLVRLERIAFGIWRCPKCGFT 65
Query: 273 VAGGAWVFSTTAASSCRSAVRRLREVK 353
AGGAW T + A L+EV+
Sbjct: 66 FAGGAWTPQTIMGKAL--APEELKEVE 90
>UniRef50_Q6L225 Cluster: 50S ribosomal protein L37Ae; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L37Ae -
Picrophilus torridus
Length = 85
Score = 68.5 bits (160), Expect = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +3
Query: 84 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 263
MAK T KVG+ G++G RYG ++RK K V + A Y C C + ++R GIW C+ C
Sbjct: 1 MAKHTVKVGVAGRFGPRYGVTVRKEWSKYYVQKKAYYVCPKCKQKKVRRIANGIWECRHC 60
Query: 264 KRTVAGGAW 290
AGG++
Sbjct: 61 SYKFAGGSY 69
>UniRef50_Q74N55 Cluster: 50S ribosomal protein L37Ae; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L37Ae -
Nanoarchaeum equitans
Length = 86
Score = 68.1 bits (159), Expect = 4e-10
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = +3
Query: 96 TKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTV 275
TKKVG TG++G RYG +RK V +E+ Q K+ C FC A+ R GI+ CK+C +
Sbjct: 6 TKKVGPTGRFGPRYGLGIRKRVLTVEIKQRKKHVCPFCRSKAVIREAYGIYRCKKCGKQF 65
Query: 276 AGGAW 290
G A+
Sbjct: 66 TGLAY 70
>UniRef50_P60619 Cluster: 50S ribosomal protein L37Ae; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L37Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 92
Score = 64.5 bits (150), Expect = 5e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +3
Query: 84 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 263
MA ++ K G +G++G RYG R+ V ++E + + C CG+D + R GIW C C
Sbjct: 1 MASKSGKTGSSGRFGARYGRVSRRRVAEIESEMNEDHACPNCGEDRVDRQGTGIWQCSYC 60
Query: 264 KRTVAGGAWVFSTTAASSCRSAVR 335
GG++ T + R ++R
Sbjct: 61 DYKFTGGSYKPETPGGKTVRRSIR 84
>UniRef50_A7I9C5 Cluster: Ribosomal protein L37a; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L37a -
Methanoregula boonei (strain 6A8)
Length = 99
Score = 63.3 bits (147), Expect = 1e-08
Identities = 30/85 (35%), Positives = 43/85 (50%)
Frame = +3
Query: 99 KKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVA 278
K G G++G RYG +RK V +ME A + C C +++R GIW C++C A
Sbjct: 11 KVTGSAGRFGCRYGRFVRKRVAEMEKISRASHRCPKCDTQSVERKGTGIWLCRKCGYKFA 70
Query: 279 GGAWVFSTTAASSCRSAVRRLREVK 353
GGA+ T A+ R R V+
Sbjct: 71 GGAYQPETPTLRVALRAIDRTRAVE 95
>UniRef50_Q0W2Y6 Cluster: 50S ribosomal protein L37AE; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L37AE -
Uncultured methanogenic archaeon RC-I
Length = 96
Score = 59.3 bits (137), Expect = 2e-07
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +3
Query: 78 TKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCK 257
TK AK +K G++G RYG R +V +E + C CG+ ++ R GIWSC
Sbjct: 3 TKSAKG-RKTRSAGRWGCRYGRKARNLVADIEGNMRQAHKCPKCGRMSVWREGTGIWSCI 61
Query: 258 RCKRTVAGGAWVFSTTAASSCRSAVRRL 341
+CK + GG ++ T + + + +L
Sbjct: 62 KCKYSYTGGTYLPQTPSGKTALRTISKL 89
>UniRef50_Q3LWL0 Cluster: Ribosomal protein L37ae; n=1; Bigelowiella
natans|Rep: Ribosomal protein L37ae - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 76
Score = 58.8 bits (136), Expect = 3e-07
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +3
Query: 90 KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKR 269
K KK + K+G +YG+SLR K+E Y C FC K A+ + G+W CK+C +
Sbjct: 4 KNIKK--LCSKFGAKYGSSLRIRYMKIEKICKKTYKCIFCNKLAIIKVSTGLWKCKKCHQ 61
Query: 270 TVAGGAWVF 296
+ GGA+ F
Sbjct: 62 QMTGGAYGF 70
>UniRef50_A7DRS5 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 70
Score = 55.2 bits (127), Expect = 3e-06
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3
Query: 126 GTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAW 290
G RYG +RK K+ + K C CG R VGIWSCK+C +AG A+
Sbjct: 12 GARYGIKIRKQYTKIHLQLKEKRACPECGSKTFGRDAVGIWSCKKCSFKIAGTAY 66
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 53.6 bits (123), Expect = 1e-05
Identities = 30/57 (52%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 658 CINESANARGEAVCVLGALPXPRSLTRCARSXGCGXRYXL-TQRR*YGYPXNQGITQ 825
CI + A AR EAV VL ALP RS TRC RS GCG + R YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A0RXT9 Cluster: Ribosomal protein L37AE/L43A; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L37AE/L43A
- Cenarchaeum symbiosum
Length = 69
Score = 48.4 bits (110), Expect = 4e-04
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 126 GTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAW 290
G RYG +RK K+ K C CG R VGIW C++C VAG A+
Sbjct: 11 GARYGIKIRKEYTKIHFQLKEKRPCPECGSAKFGRVAVGIWECRKCGFKVAGTAY 65
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 44.8 bits (101), Expect = 0.004
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = +1
Query: 682 RGEAVCVLGALPXPRSLTRCARSXGCGXRYXLT 780
R +C G +P PRSLTR ARS GCG RY LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 42.7 bits (96), Expect = 0.018
Identities = 19/28 (67%), Positives = 19/28 (67%)
Frame = -2
Query: 858 PXXGLLXTCXFLRYPLIXWITVLPPLSE 775
P L TC F YPLI WITVLPPLSE
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSE 46
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.3 bits (95), Expect = 0.024
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 461 DPDMIRYIDEXGQTTTRMQ 517
DPDMIRYIDE GQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.073
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 656 SALMNRPTRGERRFAYW 706
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 39.5 bits (88), Expect = 0.17
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3
Query: 777 HSKAVIRLSTXSGDNAGXNM 836
HSKAVIRLST SGDNAG NM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.5 bits (88), Expect = 0.17
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -3
Query: 710 APNTQTASPRALADSLMQ 657
APNTQTASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A2Q538 Cluster: Ribosomal L37ae protein; n=1; Medicago
truncatula|Rep: Ribosomal L37ae protein - Medicago
truncatula (Barrel medic)
Length = 36
Score = 39.1 bits (87), Expect = 0.22
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 126 GTRYGASLRKMVKKMEVTQHAK 191
GTRY ASL K +KKMEV+QH+K
Sbjct: 9 GTRYSASLHKQIKKMEVSQHSK 30
>UniRef50_UPI00015B4280 Cluster: PREDICTED: similar to
ENSANGP00000012345; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012345 - Nasonia
vitripennis
Length = 706
Score = 35.1 bits (77), Expect = 3.6
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = -1
Query: 334 LTADLHDEAAVVENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQV 194
+ A+ H ++ ++ N APP + +Q Q+P Q++++ +PQ++QV
Sbjct: 549 MQANQHPQS-LMSNPMAPPPHMTQQHMQPQVPQQQQYMQQVPQSQQV 594
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 8.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 539 EIXDAXALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 706
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,764,896
Number of Sequences: 1657284
Number of extensions: 12028431
Number of successful extensions: 28760
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28748
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 119538648642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -