Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L22
         (1123 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   5.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   5.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   9.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   9.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   9.8  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 360 GEGQQDSRTSLARQSSEE 413
           G G QDSRTS + Q  +E
Sbjct: 153 GSGHQDSRTSPSGQHLQE 170


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 360 GEGQQDSRTSLARQSSEE 413
           G G QDSRTS + Q  +E
Sbjct: 153 GSGHQDSRTSPSGQHLQE 170


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 166 LDDAYAAPANFLEIDVLNPVT 228
           +DDAY  P     +DV+N +T
Sbjct: 183 IDDAYDIPGMSENVDVINLMT 203


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 360 GEGQQDSRTSLARQSSEE 413
           G G QDSRTS + Q  +E
Sbjct: 153 GSGHQDSRTSPSGQHLQE 170


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +3

Query: 576 LRARQDQEHITVHAAPSPEPRLCSSPRAPPTSGS 677
           + A    + I     P+PEP+   +  + PT  S
Sbjct: 382 INAALKSDEIPPEPVPTPEPQPTQTTESEPTQAS 415


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +3

Query: 480 SGSVHQQDSRAPAGAERA-LPPHVPAGAHHRQELRA 584
           SGS  Q  S + + +  A + P+V A  HH Q   A
Sbjct: 41  SGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAA 76


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +3

Query: 480 SGSVHQQDSRAPAGAERA-LPPHVPAGAHHRQELRA 584
           SGS  Q  S + + +  A + P+V A  HH Q   A
Sbjct: 41  SGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAA 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,752
Number of Sequences: 336
Number of extensions: 4376
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 32475555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)