Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L22
(1123 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034364-3|CAA22253.1| 162|Caenorhabditis elegans Hypothetical ... 231 7e-61
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 36 0.069
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 36 0.069
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 36 0.069
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 34 0.16
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 34 0.16
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.64
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.64
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 0.64
AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical... 31 1.1
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 29 4.5
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 29 6.0
>AL034364-3|CAA22253.1| 162|Caenorhabditis elegans Hypothetical
protein W06D4.5 protein.
Length = 162
Score = 231 bits (565), Expect = 7e-61
Identities = 109/153 (71%), Positives = 126/153 (82%)
Frame = +1
Query: 139 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 318
+R+ K+QTLD+AYA PANFLEI+V+NP+T GVGK RYTDYE+RMR+NLPVFK K+SSV
Sbjct: 9 QRIPSKRQTLDEAYAPPANFLEIEVINPITH-GVGKMRYTDYEIRMRSNLPVFKQKESSV 67
Query: 319 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFRXXXXXXXXXXXXXXXKGLEVFIN 498
RRRYSDFEW+R ELERDSKIVVP LPGK+ KRQLPFR K LE+FIN
Sbjct: 68 RRRYSDFEWVRAELERDSKIVVPTLPGKSFKRQLPFRSDDGIFEEEFIENRRKALELFIN 127
Query: 499 KIAGHPLAQNERCLHMFLQEPTIDRSYVPGKIR 597
K+AGHPLAQNER LH+FLQEPTID++YVPGKIR
Sbjct: 128 KVAGHPLAQNERSLHIFLQEPTIDKNYVPGKIR 160
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 35.5 bits (78), Expect = 0.069
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 316 VRRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFRXXXXXXXXXXXXXXXKGLEVFI 495
V RRY F+WL +L +K V+ P+P LP + L++++
Sbjct: 260 VSRRYKHFDWLHEQL--SAKYVLIPIP------PLPEKQVAGRYEEDLIDHRKHILQLWV 311
Query: 496 NKIAGHP-LAQNERCLHMFLQEPTIDRSYVPGKIR 597
NKI HP L+Q+E LH T ++ + GK R
Sbjct: 312 NKICRHPVLSQSEVWLHFI--SCTDEKDWKNGKRR 344
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 35.5 bits (78), Expect = 0.069
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 316 VRRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFRXXXXXXXXXXXXXXXKGLEVFI 495
V RRY F+WL +L +K V+ P+P LP + L++++
Sbjct: 262 VSRRYKHFDWLHEQL--SAKYVLIPIP------PLPEKQVAGRYEEDLIDHRKHILQLWV 313
Query: 496 NKIAGHP-LAQNERCLHMFLQEPTIDRSYVPGKIR 597
NKI HP L+Q+E LH T ++ + GK R
Sbjct: 314 NKICRHPVLSQSEVWLHFI--SCTDEKDWKNGKRR 346
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 35.5 bits (78), Expect = 0.069
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 316 VRRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFRXXXXXXXXXXXXXXXKGLEVFI 495
V RRY F+WL +L +K V+ P+P LP + L++++
Sbjct: 288 VSRRYKHFDWLHEQL--SAKYVLIPIP------PLPEKQVAGRYEEDLIDHRKHILQLWV 339
Query: 496 NKIAGHP-LAQNERCLHMFLQEPTIDRSYVPGKIR 597
NKI HP L+Q+E LH T ++ + GK R
Sbjct: 340 NKICRHPVLSQSEVWLHFI--SCTDEKDWKNGKRR 372
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 34.3 bits (75), Expect = 0.16
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 468 PQKRSGSVHQQDSRAPAGAERALPPHVPAGAHHRQELRARQDQEHITVHAAPSPEPRLCS 647
P K++ + Q AP RA PP P R EL D +++ + P+ P+
Sbjct: 543 PSKQASELVQNGYAAPQEPRRATPPPEPL----RNELPKHSDLLNVSKPSEPAEPPKPSD 598
Query: 648 SPRAPPTSGSRTLV 689
+PR P + + ++
Sbjct: 599 APREPEVAAAEAVI 612
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 307 DSSVRRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 429
+SS+ YSDF+WL N + + ++P LP K LK+ R
Sbjct: 578 NSSIYLFYSDFDWLANPKDVEG-FLIPMLPSKTLKKATKLR 617
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.64
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +3
Query: 450 GGIYRGPQKRSGSVHQQDSRAPAGAERALPPHVPAGAHHRQE------LRARQDQEHITV 611
GG GPQ + Q + A AHH + +A Q Q+ T
Sbjct: 522 GGPPPGPQAMRAPMPQHMQEMDEHQRQWYAHQQAAAAHHHAQQQAAAQAQAAQAQQASTP 581
Query: 612 HAAPSPEPRLCSSPRAPPTSGSRT 683
+ +P P+ SS +A PTSG+ T
Sbjct: 582 APSTTPAPQAASSSQAAPTSGANT 605
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.64
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = +3
Query: 468 PQKRSGSVHQQDSRAPAGAERALPPHVPAGAHHRQELRARQDQEHITVHAAPSPEPRLCS 647
PQ S + + P A PP VP + + R + T+ AP P PR+ S
Sbjct: 217 PQATSATRLARPLAPPPARPAAPPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIAS 276
Query: 648 SPRAPPTSGSRTL 686
PTS L
Sbjct: 277 KTSVAPTSSRAPL 289
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.64
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = +3
Query: 468 PQKRSGSVHQQDSRAPAGAERALPPHVPAGAHHRQELRARQDQEHITVHAAPSPEPRLCS 647
PQ S + + P A PP VP + + R + T+ AP P PR+ S
Sbjct: 219 PQATSATRLARPLAPPPARPAAPPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIAS 278
Query: 648 SPRAPPTSGSRTL 686
PTS L
Sbjct: 279 KTSVAPTSSRAPL 291
>AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical
protein Y59A8B.22 protein.
Length = 552
Score = 31.5 bits (68), Expect = 1.1
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 23/129 (17%)
Frame = +1
Query: 238 VGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLP---- 396
+ ++ Y V RT L K +++V R + +F WL LE + ++PP P
Sbjct: 112 LSEREKVKYTVHTRTRLQEMK-PETAVVREHEEFLWLHGTLEDNENYAGFIIPPAPPKPN 170
Query: 397 -------------GKALKRQLPFRXXXXXXXXXXXXXXXKGL---EVFINKIAGHPLAQN 528
G+A + F K + EVF+ +IA HP+ +N
Sbjct: 171 FDSSREKLQKLGEGEATMTKEEFLKMKHDLEQDYLAQFKKTVAMHEVFLQRIAAHPVFKN 230
Query: 529 ERCLHMFLQ 555
++ +FLQ
Sbjct: 231 DQNFRIFLQ 239
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 512 TRWRRTSAASTCSCRSPPSTGATCPARSGTHNCTRRAVTRAEALQQSSRPT 664
T WRR+ AS+ + SP G P +S HN + + A +Q S+ PT
Sbjct: 676 TAWRRSHDASSYT-GSPVVGGVLVPIQSLKHNHSGSSSNGASVVQTSTYPT 725
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 527 TSAASTCSCRSPPSTGAT-CPARSGTHN 607
TS+++TC+ R P+TG + CPAR+ N
Sbjct: 185 TSSSTTCADRVNPTTGVSDCPARASLCN 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,101,706
Number of Sequences: 27780
Number of extensions: 408568
Number of successful extensions: 1267
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3025992820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -