Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L20
(1218 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 146 4e-35
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 146 4e-35
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 140 2e-33
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 140 2e-33
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 109 3e-24
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 109 3e-24
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 109 3e-24
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 95 9e-20
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 95 9e-20
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 77 3e-14
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 77 3e-14
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 77 3e-14
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 66 5e-11
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 66 5e-11
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 59 7e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 59 7e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 59 7e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 59 7e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 59 7e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 59 7e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 58 2e-08
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 58 2e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 55 9e-08
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 55 1e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 54 2e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 54 2e-07
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 54 3e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 53 5e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 53 5e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 53 5e-07
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 53 5e-07
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 53 5e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 53 5e-07
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 53 5e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 52 6e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 8e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 52 1e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 52 1e-06
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 51 2e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 51 2e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 51 2e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 50 4e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 4e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 49 8e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 2e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 2e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 3e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 5e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 46 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 42 9e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 42 9e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 0.001
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 42 0.001
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 0.001
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 42 0.001
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.003
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 40 0.004
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 39 0.006
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.008
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.008
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.011
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.011
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 37 0.025
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 37 0.025
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.025
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.033
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.033
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.044
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.044
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 36 0.044
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 36 0.044
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.058
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.058
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.058
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.058
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.058
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 35 0.13
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 35 0.13
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 35 0.13
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 34 0.18
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.41
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.41
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.41
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.41
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.54
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.54
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.54
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 32 0.71
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.94
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 1.2
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 1.2
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 2.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 2.2
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 2.9
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 2.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.8
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 3.8
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 8.8
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 146 bits (353), Expect = 4e-35
Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 441 GEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 617
E TI K V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 618 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 734
R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 146 bits (353), Expect = 4e-35
Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 441 GEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 617
E TI K V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 618 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 734
R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 140 bits (339), Expect = 2e-33
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Frame = +3
Query: 243 GRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESI 422
G K+F+GGLSW+ T + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 423 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 575
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 576 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 734
+ + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +3
Query: 444 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 623
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 624 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 734
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 140 bits (339), Expect = 2e-33
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Frame = +3
Query: 243 GRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESI 422
G K+F+GGLSW+ T + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 423 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 575
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 576 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 734
+ + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +3
Query: 444 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 623
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 624 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 734
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 109 bits (263), Expect = 3e-24
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL+ TD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 441 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEV 587
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 109 bits (263), Expect = 3e-24
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL+ TD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 441 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEV 587
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 109 bits (263), Expect = 3e-24
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
K+FVGGL+ TD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 441 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEV 587
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 588 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 95.1 bits (226), Expect = 9e-20
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Frame = +3
Query: 306 LRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 485
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 486 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 632
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 633 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
F+TF+ V+ + + G DV++ K +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 137 KSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 95.1 bits (226), Expect = 9e-20
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Frame = +3
Query: 306 LRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 485
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 486 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 632
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 633 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
F+TF+ V+ + + G DV++ K +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 441 GEHTINNKKVDPKKAKAR 494
H +N + D +K ++
Sbjct: 137 KSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 77.0 bits (181), Expect = 3e-14
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
KLF+GGLS + TD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 441 GEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFS 563
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 564 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPKP 737
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+ T P
Sbjct: 170 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 224
Query: 738 DG 743
+G
Sbjct: 225 NG 226
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 77.0 bits (181), Expect = 3e-14
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
KLF+GGLS + TD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 441 GEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFS 563
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 564 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPKP 737
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+ T P
Sbjct: 190 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 244
Query: 738 DG 743
+G
Sbjct: 245 NG 246
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 77.0 bits (181), Expect = 3e-14
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
KLF+GGLS + TD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 441 GEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFS 563
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 564 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPKP 737
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+ T P
Sbjct: 191 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 245
Query: 738 DG 743
+G
Sbjct: 246 NG 247
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 66.1 bits (154), Expect = 5e-11
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Frame = +3
Query: 192 AAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNT 371
AA G A+ + L+VG L + + L + F A G + I V D T
Sbjct: 10 AAVAGAAAPQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNAT 69
Query: 372 GRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSS 527
S G+A++ F+ P ++ M ++ K + DP ++ G IF+ L
Sbjct: 70 RLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDK 129
Query: 528 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGK 704
I + I + FS FG IL ++ D+ KG+ F+ FE+E+ N + K + GK
Sbjct: 130 VIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGK 188
Query: 705 EVDVKRATPK 734
+V V + P+
Sbjct: 189 KVFVGKFQPR 198
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +3
Query: 225 NSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
+ AE + L+V L D L+ F +YG I V D N GRS+GF F+ F
Sbjct: 306 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 364
Query: 405 KAPE 416
+ PE
Sbjct: 365 EKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 66.1 bits (154), Expect = 5e-11
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Frame = +3
Query: 192 AAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNT 371
AA G A+ + L+VG L + + L + F A G + I V D T
Sbjct: 10 AAVAGAAAPQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNAT 69
Query: 372 GRSRGFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSS 527
S G+A++ F+ P ++ M ++ K + DP ++ G IF+ L
Sbjct: 70 RLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDK 129
Query: 528 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGK 704
I + I + FS FG IL ++ D+ KG+ F+ FE+E+ N + K + GK
Sbjct: 130 VIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGK 188
Query: 705 EVDVKRATPK 734
+V V + P+
Sbjct: 189 KVFVGKFQPR 198
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +3
Query: 225 NSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
+ AE + L+V L D L+ F +YG I V D N GRS+GF F+ F
Sbjct: 306 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 364
Query: 405 KAPE 416
+ PE
Sbjct: 365 EKPE 368
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 61.3 bits (142), Expect = 1e-09
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L V G+ ++ TD+ + +F G + +K + G S+GF F+ + +KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 444 EHTINNKKVDPKKAKARH-------GKIFVGGLSSEISDDEIRNFF-SEFGTILEVEMPF 599
+H I+ ++ D K R +IFVG L+ ++ + ++R F E + +E +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVT 293
Query: 600 DK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
D +GF F+T S + ++ T+ G V + A P+ +
Sbjct: 294 DVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQRKGFCFITF 644
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQRKGFCFITF 644
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQRKGFCFITF 644
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQRKGFCFITF 644
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQRKGFCFITF 644
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 58.8 bits (136), Expect = 7e-09
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQRKGFCFITF 644
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESID-KVMAA 440
++VGGL + ++ L + G + +N+ D T +GF F+ F E D +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 441 GEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPF 599
+ K + KA A IFVG L E+ + + + FS FG IL+V ++
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 600 DKTKNQRKGFCFITFESEQVVNDLLK 677
D KGF FI F S + + L+
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALE 160
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 SAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXI-NVKXDPNTGRSRGFAFIVF 404
SA +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 405 KAPESIDKVMAA 440
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 683
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 684 KR-TIGGKEVDVKRAT 728
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESID-KVMAA 440
++VGGL + ++ L + G + +N+ D T +GF F+ F E D +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 441 GEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPF 599
+ K + KA A IFVG L E+ + + + FS FG IL+V ++
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 600 DKTKNQRKGFCFITFESEQVVNDLLK 677
D KGF FI F S + + L+
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALE 170
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 228 SAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXI-NVKXDPNTGRSRGFAFIVF 404
SA +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 405 KAPESIDKVMAA 440
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 683
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 684 KR-TIGGKEVDVKRAT 728
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 57.2 bits (132), Expect = 2e-08
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM-AA 440
L++G L + ++ L + F G + I V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 441 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 600 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 704
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 246 RAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPE 416
R L+V + + D LRDHF ++G I V D N GRS+GF F+ F+ PE
Sbjct: 339 RYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 45.2 bits (102), Expect = 9e-05
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Frame = +3
Query: 237 APGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPE 416
A RA +F+ L +K + D F +G I V D + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 417 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 554
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 555 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
FS+FG I + D + + KGF F+ F + ++
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 45.2 bits (102), Expect = 9e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 680
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 681 PKRTIGGKEVDVKRATPKPD 740
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 57.2 bits (132), Expect = 2e-08
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM-AA 440
L++G L + ++ L + F G + I V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 441 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 599
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 600 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 704
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +3
Query: 246 RAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPE 416
R L+V + + D LRDHF ++G I V D N GRS+GF F+ F+ PE
Sbjct: 339 RYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 45.2 bits (102), Expect = 9e-05
Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Frame = +3
Query: 237 APGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPE 416
A RA +F+ L +K + D F +G I V D + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 417 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 554
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 555 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
FS+FG I + D + + KGF F+ F + ++
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 45.2 bits (102), Expect = 9e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 680
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 681 PKRTIGGKEVDVKRATPKPD 740
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 55.2 bits (127), Expect = 9e-08
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +3
Query: 189 NAAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPN 368
N + +SQ+ + E A A ++VG + + T +E+ HF G + + ++ D
Sbjct: 55 NTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRF 114
Query: 369 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 482
+G +GFA++ F E + +A + + + KVDPK+
Sbjct: 115 SGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 477 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 657 VVNDLLKTPKRTIGGKEVDV-KRATPKP 737
+ + L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 54.8 bits (126), Expect = 1e-07
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = +3
Query: 228 SAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 407
+AE + A ++VG + W+ T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 408 APESIDKVMAAGEHTINNKKV 470
ES+ + N+K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.4 bits (125), Expect = 2e-07
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 26/186 (13%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP-------ES 419
+++VG +S+E + LR F +G I IN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 420 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 545
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKR 722
+++ F FG I++ ++ T +GF ++ F + ++ + +GG+ + V +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 723 ATPKPD 740
PD
Sbjct: 283 CVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.4 bits (125), Expect = 2e-07
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 26/186 (13%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP-------ES 419
+++VG +S+E + LR F +G I IN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 420 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 545
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKR 722
+++ F FG I++ ++ T +GF ++ F + ++ + +GG+ + V +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 723 ATPKPD 740
PD
Sbjct: 283 CVTPPD 288
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 53.6 bits (123), Expect = 3e-07
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESID-- 425
A K+FVG + + + + R F YG + N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 426 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 588 EMPFDKTKNQR 620
+ D+ R
Sbjct: 172 SVLRDQDGKSR 182
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 456 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 635
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 636 ITF 644
+TF
Sbjct: 101 VTF 103
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 52.8 bits (121), Expect = 5e-07
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF---------- 404
A KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQ 87
Query: 405 ------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 566
K +++ M +++ PK K K+F+G LS + S+DE+R F+
Sbjct: 88 ATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 567 FGTILEVEMPFDKTKNQRKGFCFITFE 647
FG + EV + KG F+ ++
Sbjct: 147 FGELDEVTV-LRGADGASKGCAFVKYK 172
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 52.8 bits (121), Expect = 5e-07
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Frame = +3
Query: 237 APGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGR-SRGFAFIVFKAP 413
APG A +FV L + T+ E+R A + I N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 414 ESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNF 557
+ + + + + + DP+K K+FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRATP 731
FS+FGT+ V K + KG F+ F++E + + K + +E++V + P
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNP 760
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 52.8 bits (121), Expect = 5e-07
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF---------- 404
A KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQ 87
Query: 405 ------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 566
K +++ M +++ PK K K+F+G LS + S+DE+R F+
Sbjct: 88 ATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 567 FGTILEVEMPFDKTKNQRKGFCFITFE 647
FG + EV + KG F+ ++
Sbjct: 147 FGELDEVTV-LRGADGASKGCAFVKYK 172
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 52.8 bits (121), Expect = 5e-07
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +3
Query: 246 RAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXI-NVKXDPNT-GRS-----RGFAFIVF 404
R + K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 405 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 506
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 507 -FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 315 HFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 494
HFG++ + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 650
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 651 EQVVNDLLKTPKR 689
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 52.8 bits (121), Expect = 5e-07
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +3
Query: 246 RAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXI-NVKXDPNT-GRS-----RGFAFIVF 404
R + K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 405 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 506
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 507 -FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 315 HFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 494
HFG++ + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 650
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 651 EQVVNDLLKTPKR 689
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 52.8 bits (121), Expect = 5e-07
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +3
Query: 171 YNQLXGNAAHGGGASQAHNSAEAP--GRAXAX--KLFVGGLSWEPTDKELRDHFGAYGEI 338
Y Q+ H A+ A ++ P G K+FVGGL + +DK L ++F +G+I
Sbjct: 2 YGQVQDPLVHAAAAALAQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDI 61
Query: 339 XXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 473
V D NT +SRG+ F+ K S ++ I+ +K +
Sbjct: 62 EEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 681 PKRTIGGKEVDVKRA 725
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 52.8 bits (121), Expect = 5e-07
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +3
Query: 246 RAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXI-NVKXDPNT-GRS-----RGFAFIVF 404
R + K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 405 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 506
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 507 -FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 315 HFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 494
HFG++ + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 650
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 651 EQVVNDLLKTPKR 689
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 52.4 bits (120), Expect = 6e-07
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP-------ES 419
+++VG +S+E + LR F +G I IN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 420 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 545
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+++ F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.0 bits (119), Expect = 8e-07
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAPESI 422
L+VG L T+ + F G + V D G + +AF+ F +A +++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTM 104
Query: 423 DKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 587
+K + N V+P + ++ RH +FVG LSSE+ + ++R F FG + +
Sbjct: 105 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 164
Query: 588 EMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 737
++ D + KG+ F+++ + E+ + + + +G + + AT KP
Sbjct: 165 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA- 440
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 441 -----GEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 51.6 bits (118), Expect = 1e-06
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPESIDKVMAA 440
L + L T +E+R F + GEI + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 441 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 605
+ NK + P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 606 TKNQRKGFCFITFESEQVVNDLLKT 680
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 680
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 681 PKRTIGGKEVDV--KRATP 731
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 51.6 bits (118), Expect = 1e-06
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Frame = +3
Query: 186 GNAAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDP 365
G GG A P +++VG + + + L F G+I + + DP
Sbjct: 177 GQRKFGGPPPDWEGPATGPA-GQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDP 235
Query: 366 NTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDD 542
+G SRG+AF+ + E + H I+ K + ++F+G + S D
Sbjct: 236 MSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKD 295
Query: 543 EI----RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 671
EI + ++ +P D K + +GFCF+ F + +D+
Sbjct: 296 EILEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 234 EAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 413
EA + +++ + W +L +F YG I +N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 414 ESIDKVMAAGEHTINNKKVD 473
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
Score = 43.2 bits (97), Expect = 4e-04
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +3
Query: 450 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 629
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 630 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 731
ITF+S+ N ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.2 bits (117), Expect = 1e-06
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +3
Query: 393 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 554
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 555 FFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 665
FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAY-GEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+FVG L +E T+ L F A G + + + D +TG+ +GFAF+ FK S+ +A
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LAL 305
Query: 441 GEHTINNKKVDPKKAK 488
TI +K D + K
Sbjct: 306 SMETIKMEKRDLRITK 321
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 593
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 668
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 669 LLKTPKRTIGGKEVDVKRATPKP 737
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 668
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 669 LLKTPKRTIGGKEVDVKRATPKP 737
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 50.8 bits (116), Expect = 2e-06
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMA-- 437
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 438 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 545
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 546 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
IR F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 668
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 669 LLKTPKRTIGGKEVDVKRATPKP 737
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 31.9 bits (69), Expect = 0.94
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 611
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 50.4 bits (115), Expect = 3e-06
Identities = 28/101 (27%), Positives = 53/101 (52%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
+++GGLS+ ++ ++ F YGE+ IN+ D +TG+S+GFAF+ +K S ++A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV- 96
Query: 444 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 566
N + + + H + + E +DDE + + E
Sbjct: 97 -DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 43.2 bits (97), Expect = 4e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 49.6 bits (113), Expect = 4e-06
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 168 PYNQLXGNAAHGGGASQAHNSAEAPGRAXAXK-LFVGGLSWEPTDKELRDHFGAYGEIXX 344
P + G GGG + N K L V LS T+K+LRD FG +GEI
Sbjct: 45 PRARYGGGGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINK 104
Query: 345 INVKXDPNTGRSRGFAFIVFKAPE 416
++ D +G SRGF FI F E
Sbjct: 105 CDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.044
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 510 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 477 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESE 653
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 654 QVVNDLLKTPKRTIGGKEVDVKRATPKPD 740
+ + +G + + AT KPD
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 37.9 bits (84), Expect = 0.014
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 34.7 bits (76), Expect = 0.13
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 447 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 620
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 621 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 710
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 48.8 bits (111), Expect = 8e-06
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA- 440
+FVG LS + +++ L+ F +GE+ V D T +S+G+ F+ F ++ + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 441 -----GEHTI--------NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNF 557
G+ + N+++ K KA + ++VG +S + +D ++R+
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEV 710
FS +G I EV + K QR + F+ +E ++ +++ + + G +V
Sbjct: 257 FSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
Score = 46.4 bits (105), Expect = 4e-05
Identities = 18/70 (25%), Positives = 44/70 (62%)
Frame = +3
Query: 447 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 626
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 627 FCFITFESEQ 656
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 246 RAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESID 425
+A ++VG +S + TD +LRD F YG+I + + +++ +AF+ ++ E
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECAT 286
Query: 426 KVM 434
K +
Sbjct: 287 KAI 289
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
+FVG +S++ ++ +R F G + I + D TG+ +G+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 677
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 678 TPKR 689
TPK+
Sbjct: 126 TPKQ 129
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/97 (23%), Positives = 50/97 (51%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
++FVGG T+ ELR+HF + + + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 551
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 677
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 678 TPKR 689
TPK+
Sbjct: 127 TPKQ 130
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/97 (23%), Positives = 50/97 (51%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
++FVGG T+ ELR+HF + + + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 551
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 495 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 674
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 675 K 677
+
Sbjct: 164 E 164
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 4e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 471 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 651 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 734
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +3
Query: 225 NSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
+ AE + L+V L D L+ F +YG I V D N GRS+GF F+ F
Sbjct: 243 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 301
Query: 405 KAPE 416
+ PE
Sbjct: 302 EKPE 305
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 46.4 bits (105), Expect = 4e-05
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
LFVG + + ++E+R F +G++ +++K NT +AF++F+ + + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 226
Query: 444 EHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 590
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 227 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.13
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 677
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 678 TPKRTI--GGKEVDV 716
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 46.4 bits (105), Expect = 4e-05
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
LFVG + + ++E+R F +G++ +++K NT +AF++F+ + + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 226
Query: 444 EHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 590
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 227 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.13
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 677
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 678 TPKRTI--GGKEVDV 716
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 46.4 bits (105), Expect = 4e-05
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
LFVG + + ++E+R F +G++ +++K NT +AF++F+ + + A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKA 203
Query: 444 EHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 590
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 204 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 34.7 bits (76), Expect = 0.13
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 677
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 678 TPKRTI--GGKEVDV 716
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.0 bits (104), Expect = 5e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
++VG + ++ T++E+ ++F A G + + + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.7 bits (86), Expect = 0.008
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 45.6 bits (103), Expect = 7e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
++VG ++ T++EL + F + G+I + + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 510 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 270 VGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMA 437
V L E + ELRD FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 41.9 bits (94), Expect = 9e-04
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L + ++ + ++L + F A G + + + D TGRS+G ++ F ES+ +A
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 86
Query: 444 EHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNF 557
+ + ++ A + + V L +I + IR+
Sbjct: 87 GQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDI 146
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
F FG I ++++ D + R GF ITF +
Sbjct: 147 FESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 37.1 bits (82), Expect = 0.025
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 237 APGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPE 416
APG + V L + +K +RD F ++G I I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 417 SIDK 428
K
Sbjct: 179 DAQK 182
Score = 32.3 bits (70), Expect = 0.71
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 459 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 638
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 639 TFESEQVVNDLLKTPKRTIGGKEVDVKR 722
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 41.9 bits (94), Expect = 9e-04
Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L + ++ + ++L + F A G + + + D TGRS+G ++ F ES+ +A
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 231
Query: 444 EHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNF 557
+ + ++ A + + V L +I + IR+
Sbjct: 232 GQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDI 291
Query: 558 FSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
F FG I ++++ D + R GF ITF +
Sbjct: 292 FESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 37.1 bits (82), Expect = 0.025
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 237 APGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPE 416
APG + V L + +K +RD F ++G I I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 417 SIDK 428
K
Sbjct: 324 DAQK 327
Score = 32.3 bits (70), Expect = 0.71
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 459 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 638
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 639 TFESEQVVNDLLKTPKRTIGGKEVDVKR 722
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
++VG ++ T+ +L ++F G + + + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.5 bits (88), Expect = 0.005
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 653
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 683
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 684 KRT-IGGKEVDV 716
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
Score = 38.3 bits (85), Expect = 0.011
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
+FV + E T+ ++ D F YG+I I++ D TG +G+A + ++ + ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 444 EHTI---NNKKVD 473
T N KVD
Sbjct: 117 NDTDLLGQNVKVD 129
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +3
Query: 192 AAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNT 371
A H A+ + E A +F+G + + T +E+ +HF G+I + D T
Sbjct: 33 AKHLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFT 92
Query: 372 GRSRGFAFIVFKAPESIDKVM 434
+ + FA+I F SI+ +
Sbjct: 93 KKQKNFAYIEFDDSSSIENAL 113
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
LFVG +++E ++ +LR F AYG+I + + D G+ RG+AFI +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMA 437
L+VGG + + T+K L F +G++ I++ D +G+ RGF F+ F E D MA
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 492 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVND 668
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 669 LLKTPKRTIGGKEVDVKRATP 731
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 41.5 bits (93), Expect = 0.001
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +3
Query: 225 NSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 404
+ AE + L+V L D L+ F +YG I V D N GRS+GF F+ F
Sbjct: 246 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 304
Query: 405 KAPE 416
+ PE
Sbjct: 305 EKPE 308
Score = 35.9 bits (79), Expect = 0.058
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = +3
Query: 192 AAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNT 371
AA G A+ + L+VG L + + L + F A G + I V D T
Sbjct: 10 AAVAGAAAPQPGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNAT 69
Query: 372 GRSRGFAFIVFKAPESIDKVM 434
S G+A++ F+ P ++ M
Sbjct: 70 RLSLGYAYVNFQQPADAERAM 90
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/79 (21%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 677
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 678 TPKRTIGGKEVDVKRATPK 734
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPES 419
+LF+ L + + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 441 GEHTINNKK 467
T N K
Sbjct: 63 SNQTFFNSK 71
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
A +F+G + + T +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 60 AKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.008
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 201 GGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRS 380
GGG +A AP L + LS++ T +LR F YG+I +++ D + +S
Sbjct: 5 GGGDRRA-----APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQS 59
Query: 381 RGFAFIVF 404
+GF F+ F
Sbjct: 60 KGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.008
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 201 GGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRS 380
GGG +A AP L + LS++ T +LR F YG+I +++ D + +S
Sbjct: 5 GGGDRRA-----APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQS 59
Query: 381 RGFAFIVF 404
+GF F+ F
Sbjct: 60 KGFGFVRF 67
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 243 GRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK-APES 419
G + K++VG L + +KE+ D F YG I +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 420 IDKVMAAGEHTINNKKV 470
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.011
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 243 GRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK-APES 419
G + K++VG L + +KE+ D F YG I +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 420 IDKVMAAGEHTINNKKV 470
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 37.1 bits (82), Expect = 0.025
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 681 PK-RTIGGKEVDVKRATPKPDG 743
+ +GG+ V + + P+ G
Sbjct: 56 LNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 37.1 bits (82), Expect = 0.025
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 681 PK-RTIGGKEVDVKRATPKPDG 743
+ +GG+ V + + P+ G
Sbjct: 56 LNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 37.1 bits (82), Expect = 0.025
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 681 PK-RTIGGKEVDVKRATPKPDG 743
+ +GG+ V + + P+ G
Sbjct: 56 LNGKELGGERVILDYSKPRGGG 77
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.033
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 656
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAG 443
L+VG LS+ + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 444 EHTINNKKVDPKKAKARHGKIFVGG 518
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.033
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 674
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.044
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 2/186 (1%)
Frame = +3
Query: 186 GNAAHGGGASQAHNSAEAPGRAXAXK--LFVGGLSWEPTDKELRDHFGAYGEIXXINVKX 359
G + +G +++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 360 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 539
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 540 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 719
+ + + FS FG + D+ K + G + FE + N+ + + +V +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAMAAIR-----DKVFLL 256
Query: 720 RATPKP 737
A+PKP
Sbjct: 257 TASPKP 262
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.044
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 2/186 (1%)
Frame = +3
Query: 186 GNAAHGGGASQAHNSAEAPGRAXAXK--LFVGGLSWEPTDKELRDHFGAYGEIXXINVKX 359
G + +G +++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 360 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 539
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 540 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 719
+ + + FS FG + D+ K + G + FE + N+ + + +V +
Sbjct: 203 EMLYHAFSHFGDVERAVHIVDE-KGRPTGEGIVEFERKPNCNEAMAAIR-----DKVFLL 256
Query: 720 RATPKP 737
A+PKP
Sbjct: 257 TASPKP 262
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 36.3 bits (80), Expect = 0.044
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 276 GLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 455
GL WE T++ELRD FG G I + + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 456 NNKKVD 473
++ ++
Sbjct: 68 GSRYIE 73
Score = 34.7 bits (76), Expect = 0.13
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +3
Query: 516 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 695
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 696 GGKEVDVKRATPKP 737
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 36.3 bits (80), Expect = 0.044
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 276 GLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 455
GL WE T++ELRD FG G I + + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 456 NNKKVD 473
++ ++
Sbjct: 68 GSRYIE 73
Score = 34.7 bits (76), Expect = 0.13
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +3
Query: 516 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 695
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 696 GGKEVDVKRATPKP 737
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.058
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
A K+F+GGL T+ ++++ ++G + ++ D + G S+G+AF + P D+ +
Sbjct: 290 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAI 348
Query: 435 A 437
A
Sbjct: 349 A 349
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.058
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 596
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.058
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
A K+F+GGL T+ ++++ ++G + ++ D + G S+G+AF + P D+ +
Sbjct: 290 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAI 348
Query: 435 A 437
A
Sbjct: 349 A 349
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 35.9 bits (79), Expect = 0.058
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
A K+F+GGL T+ ++++ ++G + ++ D + G S+G+AF + P D+ +
Sbjct: 265 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAI 323
Query: 435 A 437
A
Sbjct: 324 A 324
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.058
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 255 AXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
A K+F+GGL T+ ++++ ++G + ++ D + G S+G+AF + P D+ +
Sbjct: 268 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAI 326
Query: 435 A 437
A
Sbjct: 327 A 327
Score = 34.7 bits (76), Expect = 0.13
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 644
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.13
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+++V + + +++L F AYG + ++V+ N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRV--LSVEIVTNDRGSKGFGFVTLDSIESCEKARAA 109
Query: 441 -GEHTINNKKVDPKKAKARHGKI 506
E + + ++ ++A K+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKL 132
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 34.7 bits (76), Expect = 0.13
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 210 ASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGF 389
A++ + A+ P L++ L ++ T +E+ + FG +G + I V NT +RG
Sbjct: 4 ANRQNRGAKLPPEVNRI-LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGT 59
Query: 390 AFIVFKAPESIDKVMAAGEH 449
AF+V+ E I A EH
Sbjct: 60 AFVVY---EDIFDAKTACEH 76
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.7 bits (76), Expect = 0.13
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+++V + + +++L F AYG + ++V+ N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRV--LSVEIVTNDRGSKGFGFVTLDSIESCEKARAA 109
Query: 441 -GEHTINNKKVDPKKAKARHGKI 506
E + + ++ ++A K+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKL 132
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 34.3 bits (75), Expect = 0.18
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 261 KLFVGGLSWEPTDKELRDHFGAYG 332
K+FVGG+ W+ T+ L+D FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 596
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 677
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.41
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 1012 PPPSPXXXAPXVPVIR--VFQSNXXPP*PP*PX*P*PPXP*LXYPPP*PP*P 863
PPP P P +P + PP P P P PP P + PPP PP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP-PPMP 82
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.54
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 617
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 618 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 719
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.54
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 441 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 617
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 618 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 719
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.54
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 474 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 584
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 32.3 bits (70), Expect = 0.71
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +3
Query: 240 PGRAXAXKLFVGGL----SWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 407
P L++G L + + T+K+L D F YG+I + V + +G AFI F
Sbjct: 229 PADTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFT 282
Query: 408 APESIDKVMAAGEHTINNKKVDPKKAKARHGK 503
E+ ++ A E + N + K+ R G+
Sbjct: 283 TREAAER---AAERSFNKTFIKGKRLTIRWGE 311
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.94
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = -3
Query: 1012 PPPSPXXXAPXVPVIRVFQSNXXPP*PP*PX*P*PPXP*LXYPPP*P 872
PPP+P VP +Q PP PP P P PP P PPP P
Sbjct: 112 PPPAPYPQHA-VPAPAPYQQQPPPPPPP-PHYP-PPPPHYPPPPPAP 155
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDK 428
LFV L+ TD++L F +G+I + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 662
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 663 NDLLK-TPKRTIGGKEVDVKRA 725
N + G + + V RA
Sbjct: 67 NTAISGLNGADFGNRVLKVNRA 88
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDK 428
LFV L+ TD++L F +G+I + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDK 428
LFV L+ TD++L F +G+I + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 650
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/48 (39%), Positives = 20/48 (41%)
Frame = -3
Query: 1012 PPPSPXXXAPXVPVIRVFQSNXXPP*PP*PX*P*PPXP*LXYPPP*PP 869
PPP P P P+ F PP P P PP P PPP PP
Sbjct: 76 PPPGPGGIPPPPPM---FAGGIPPPPPMMGGIP-PPPPMFGAPPPPPP 119
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +3
Query: 159 LXPPYNQLXGNAAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEI 338
L PP Q G + S + +L V + ++ + +L F G +
Sbjct: 67 LPPPTQQKQQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV 126
Query: 339 XXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 503
++V+ N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 127 --VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 264 LFVGGLSWEPTDKEL-RDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA 440
+F+GG+ ++L R G YG++ + + DP +G A + F ++ + ++
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISG 426
Query: 441 G----EHTINNKKVDPK 479
H NNK+V+ K
Sbjct: 427 RFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 429 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 581
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 156 SLXPPYNQLXGNAAHGGGASQAHNSAEAPGRAX---AXKLFVGGLSWEPTDKELRDHFGA 326
S P Y +L G+ G S S + P A + K+F+GGL + +++++ FGA
Sbjct: 209 SAPPEYKRLDGSLM-GVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGA 267
Query: 327 YGEI 338
+G++
Sbjct: 268 FGKV 271
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +3
Query: 159 LXPPYNQLXGNAAHGGGASQAHNSAEAPGRAXAXKLFVGGLSWEPTDKELRDHFGAYGEI 338
L PP Q G + S + +L V + ++ + +L F G +
Sbjct: 67 LPPPTQQKQQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV 126
Query: 339 XXINVKXDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 503
++V+ N S+GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 127 --VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 501 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 680
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 681 PKRTIGGKEV 710
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = -3
Query: 1012 PPPSPXXXAPXVPVIRVFQSNXXPP*PP*PX*P*PPXP*LXYPPP*P 872
PPP P P P+I + Q PP PP PP P L PPP P
Sbjct: 67 PPPPP----PPPPLISILQQAPPPP-PP------PPPPTLKAPPPPP 102
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -3
Query: 1021 VRXPPPSPXXXAPXVPVIRVFQSNXXPP*PP*PX*P*PPXP*LXYPPP*PP 869
V P SP P +P+ PP PP P PP P PPP PP
Sbjct: 66 VGRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIP--ASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -3
Query: 1021 VRXPPPSPXXXAPXVPVIRVFQSNXXPP*PP*PX*P*PPXP*LXYPPP*PP 869
V P SP P +P+ PP PP P PP P PPP PP
Sbjct: 288 VGRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIP--ASPPPRPP 336
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +3
Query: 264 LFVGGLSWEPTDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 413
+F+ LS++ ++ +++ +G+I + ++G S+G AF+ F P
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 537 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 659
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 2.9
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 504 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 605
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 934 PP*PX*P*PPXP*LXYPPP*PP*P 863
PP P P PP P + PPP PP P
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPPMP 89
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 688 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 575
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 294 TDKELRDHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPESIDKVM 434
T KEL+ +FGAYG+I + D + G F I F S+D ++
Sbjct: 44 TSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDVLL 88
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 486 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 656
K +H +++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,505,042
Number of Sequences: 27780
Number of extensions: 317161
Number of successful extensions: 1162
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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