Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L19
         (1208 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   2.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   3.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 398 FLLICIIFFSVGI*SFCLIYNFLLVLRHSFVLF 300
           F L+CI +F      F +   FLL + H F  F
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF 173



 Score = 24.6 bits (51), Expect = 1.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 449 LLMHCMYAAEILISCYRFLLICIIFFSVGI*SFCLIY 339
           L ++  Y A IL + +  LL+CI +F      FC  +
Sbjct: 236 LCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAF 272


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 504 CDFIIFLFECFENASLVDTVDALHVCC*DIDFVLSLSVNL 385
           C   IFLF  + N S++ TV        D+D   +L  NL
Sbjct: 77  CTEKIFLFAIYTNLSILTTVTIFKSAFWDVDKWRTLFTNL 116


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -1

Query: 476 VSRMPHWWTLLMHCMYAAEILISCYRFLLICIIFFSVGI*SFCLIYNFLLVLRHSFVLFF 297
           V+R    + L +  M+    L+      +IC+I  S  I    L+Y FL+ + ++  +F+
Sbjct: 589 VTRFNEIFGLGLLLMFGVSFLLITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYAADVFY 648


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 355 VFV*YTIFCLFFDIHLCFFLRNSFRNIKLR*YLIE 251
           +F+ + I   F  I LC  +R    N+++  Y IE
Sbjct: 250 IFILWHIVGTFSGIFLCDLIRREIANVQVLAYKIE 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,708
Number of Sequences: 336
Number of extensions: 4239
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35247023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)