Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L19
         (1208 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496...    33   0.45 
09_04_0176 + 15361766-15362836                                         30   3.2  
08_02_1592 + 28078055-28078966                                         29   7.3  
04_03_0187 + 12436934-12437108,12438020-12439044                       29   7.3  
08_01_0793 - 7685702-7686955                                           29   9.7  

>02_05_1147 -
           34447519-34448042,34448126-34449092,34449458-34449657,
           34449867-34450051,34450130-34450228,34450316-34450357,
           34450516-34450860,34450956-34451101,34451213-34451296,
           34451424-34451502,34451596-34451675,34451824-34451875,
           34451992-34452026
          Length = 945

 Score = 33.1 bits (72), Expect = 0.45
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +2

Query: 545 GLLSKTLEETKNESIC-HLELLSQDIDFTQNYLRRDLFDSPLWKRLND 685
           G+  K L+ T NE    H  LL++    TQNY    +  + +WKR+ND
Sbjct: 25  GIEQKILDATSNEPWGPHGSLLAEIAQATQNYHEYQMVMNVVWKRIND 72


>09_04_0176 + 15361766-15362836
          Length = 356

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 608 SQDIDFTQNYLRRDLFDSPLWKRLNDDQMKCNLNNI 715
           + D  FT  Y+ +DL D P W+R+ +   K   N I
Sbjct: 266 NNDKPFTLEYMWKDLKDQPKWRRVLEQSSKNKRNKI 301


>08_02_1592 + 28078055-28078966
          Length = 303

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 608 SQDIDFTQNYLRRDLFDSPLWKRLNDDQMK 697
           + D  FT  Y+ R+L D P W+R+ ++  K
Sbjct: 140 NNDKTFTLEYMWRELKDQPKWRRILEEDSK 169


>04_03_0187 + 12436934-12437108,12438020-12439044
          Length = 399

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 608 SQDIDFTQNYLRRDLFDSPLWKRLNDDQMK 697
           + D  FT  Y+ R+L D P W+R+ ++  K
Sbjct: 236 NNDKTFTLEYMWRELKDQPKWRRILEEDSK 265


>08_01_0793 - 7685702-7686955
          Length = 417

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 608 SQDIDFTQNYLRRDLFDSPLWKRLNDDQMK 697
           + D  FT  Y+ R+L D P W+R+ ++  K
Sbjct: 254 NNDKTFTLEYMWRELKDQPKWQRILEEDSK 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,410,057
Number of Sequences: 37544
Number of extensions: 370825
Number of successful extensions: 764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3701409336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)