Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L19
         (1208 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-22|CAE18019.1|  162|Caenorhabditis elegans Hypothetical p...    30   3.8  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    30   3.8  
U53335-6|AAA96171.2|  518|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    29   5.0  
AC006723-5|AAK68424.1|  575|Caenorhabditis elegans Hypothetical ...    29   8.7  

>Z98866-22|CAE18019.1|  162|Caenorhabditis elegans Hypothetical
           protein Y49E10.27 protein.
          Length = 162

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 823 VSH*SIYTFNKCCNYLCFSSS*ITSMSLLFYYIDCV 716
           + H S+ T N+CC   CFS   I       Y++DC+
Sbjct: 54  MDHASLCTNNRCCRGFCFSIKRILKHYGECYHLDCM 89


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
            F45E4.4 protein.
          Length = 2361

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/63 (22%), Positives = 34/63 (53%)
 Frame = +2

Query: 251  FDEVLSQFDIPETIPQKKAQMNVEEQAENCILNKNFKSPPKKRLCKLTESDNTKSISQQH 430
            +D V++  + P ++ Q++  ++ E   ++  + +    PP   + K+T  + TKS S + 
Sbjct: 1864 YDNVIAT-EAPSSVSQRRQPVDSETSVKSRTIQRGPTKPPP--MIKITVEEETKSDSDEE 1920

Query: 431  TCN 439
            +C+
Sbjct: 1921 SCS 1923


>U53335-6|AAA96171.2|  518|Caenorhabditis elegans Hypothetical
           protein C55C3.5 protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +2

Query: 179 LLKPRKIHCTI*VIKIVIMFESDDFDEVLSQFDIPETIPQKKAQMNVEEQAENCILNKN 355
           +LKP  I C+I ++ I+   ES +F   L    I + I    +Q   E +  + +L  N
Sbjct: 1   MLKPFIIKCSIFLLLILCSVESSEFGVTLGDAAISQLIRHTASQFLEETRVADILLKSN 59


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 320 EEQAENCILNKNFKSPPKKRLCKLTESDNTKSISQQHTCNASTVS 454
           EE A+    +KN K+P K ++ K  ++  T   S   T  ASTVS
Sbjct: 128 EEDAKTPKNSKNSKTPKKAKMPKNAKTPRTPKSSASKTPKASTVS 172


>AC006723-5|AAK68424.1|  575|Caenorhabditis elegans Hypothetical
           protein Y19D10B.5 protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -3

Query: 930 TNMXYSETIYGENV-DHASLCNVHFIDPVLSLRIINGSVTDLSTPSINAATTCAFPLLKL 754
           + + Y E I+G  V ++ +L N+ F+  +  +  ++GS   +S  +    +  +FP LKL
Sbjct: 439 SQLKYVEMIFGRLVVNNTNLTNIDFLQSLKYIYSLDGSTPAISVENNPFLSNFSFPNLKL 498


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,159,576
Number of Sequences: 27780
Number of extensions: 394394
Number of successful extensions: 1066
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)