Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L17
(1252 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 43 4e-04
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 34 0.27
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 34 0.27
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 32 0.82
12_02_1174 - 26696869-26698191 31 2.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 2.5
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 31 2.5
02_04_0400 - 22608519-22608844,22609044-22609122 31 2.5
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 3.3
11_06_0610 - 25449085-25453284 30 4.4
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 30 4.4
07_03_0560 + 19479597-19480667 30 4.4
03_03_0193 - 15312568-15312753,15312811-15312933,15313112-153131... 30 4.4
01_01_0482 + 3535083-3535194,3535301-3535467 30 4.4
01_03_0005 + 11568545-11569119,11569179-11569191 29 5.8
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 29 7.7
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 7.7
07_03_0559 + 19475893-19476783 29 7.7
07_01_0862 - 7172083-7172931 29 7.7
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 7.7
04_03_0803 - 19835284-19836050,19836337-19836418 29 7.7
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 7.7
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 7.7
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 7.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 43.2 bits (97), Expect = 4e-04
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKXKKKXXXXKXPPXXXXXXXPPXPPG 1016
PPP P K PPPPP K PP PP PPG
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPP-----PPPKGPSPPPPPPPG 371
Query: 1017 XKKTXXXXPXXXGGGGXPP 1073
KK P GG PP
Sbjct: 372 GKKGGPPPPPPKGGASRPP 390
Score = 39.5 bits (88), Expect = 0.005
Identities = 29/85 (34%), Positives = 29/85 (34%), Gaps = 2/85 (2%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKXKKKXXXXKXPPXXXXXXXPPXPPG 1016
PPPPP K PPPPP K K PP PP PP
Sbjct: 313 PPPPPPP------KPAAAAPPPPPPP--------KAAPPPPPPKGPPPPPPAKGPPPPPP 358
Query: 1017 XKKTXXXXPXXXGG--GGXPPPXKK 1085
K P GG GG PPP K
Sbjct: 359 PKGPSPPPPPPPGGKKGGPPPPPPK 383
Score = 35.5 bits (78), Expect = 0.088
Identities = 21/84 (25%), Positives = 22/84 (26%)
Frame = +3
Query: 765 PXXXXPPXXRGXGXKXXXXKXXKXPPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKX 944
P PP + K PPPP K PPPPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 945 KKKXXXXKXPPXXXXXXXPPXPPG 1016
K PP PP PG
Sbjct: 371 GGKKGGPPPPPPKGGASRPPAAPG 394
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +2
Query: 1028 PXXXPXXXXGGGXPPPXKKKXPPXXKXXXXXXXXKKKKXXXXXKKPPXXGXXGGXXKXXP 1207
P P PPP PP K K K PP G P
Sbjct: 313 PPPPPPPKPAAAAPPP-----PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Query: 1208 PPPXXKKXXXXXPPP 1252
PPP KK PPP
Sbjct: 368 PPPGGKKGGPPPPPP 382
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +1
Query: 838 PPPPPXXXPXXPQXXXXXXXXXXXXXXXXXPXXKKXKKKXXXXKXPXXXXKXXXPPXPXE 1017
PPPPP P P K P PP P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAK---GPPPPPPPKGPSPPPPPPPG 371
Query: 1018 XKKPXXPPPXXXGGGGXPP 1074
KK PPP GG PP
Sbjct: 372 GKKGGPPPPPPKGGASRPP 390
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 973 PXXXXKXXXPPXPXEXKKPXXPPPXXXGGGGXPPXXKK 1086
P K PP P + P PPP GG PP K
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +1
Query: 1000 PPXPXEXKKPXXPPPXXXGGGGXPPXXKKXXPXXKXXXXXPXKXKKKXXXXXKKTXXXXX 1179
PP P PPP PP K P P K
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK----GPSPPPPPP 369
Query: 1180 XGGXXKXXPPPPPK 1221
GG PPPPPK
Sbjct: 370 PGGKKGGPPPPPPK 383
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 PXXXPPXXXXXXPPXP--XXKKKKKKKXXXPPPPXGXXXXXXXXXXKKKGGXXXPXXXNP 412
P PP PP P K PPPP G KKGG P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Query: 413 KXGPP 427
PP
Sbjct: 386 ASRPP 390
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.9 bits (74), Expect = 0.27
Identities = 20/83 (24%), Positives = 21/83 (25%)
Frame = +3
Query: 765 PXXXXPPXXRGXGXKXXXXKXXKXPPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKX 944
P PP G K PPPPP + PPPPP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP 603
Query: 945 KKKXXXXKXPPXXXXXXXPPXPP 1013
P PP PP
Sbjct: 604 PPPPPPPILPNRSVPPPPPPPPP 626
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/86 (24%), Positives = 22/86 (25%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKXKKKXXXXKXPPXXXXXXXPPXPPG 1016
PPPPP PPPPP K P PP PP
Sbjct: 618 PPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFP-----APPPPPPPP 672
Query: 1017 XKKTXXXXPXXXGGGGXPPPXKKXXP 1094
+ G PPP P
Sbjct: 673 RSSSRTPTGAATSSKGPPPPPPPPLP 698
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 33.9 bits (74), Expect = 0.27
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +2
Query: 152 FFFFFXXXXFFFFFFFXXXXFXXF 223
FFFFF FFFFFFF F F
Sbjct: 62 FFFFFFFFFFFFFFFFFFFFFFFF 85
Score = 33.9 bits (74), Expect = 0.27
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +2
Query: 152 FFFFFXXXXFFFFFFFXXXXFXXF 223
FFFFF FFFFFFF F F
Sbjct: 63 FFFFFFFFFFFFFFFFFFFFFFFF 86
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 32.3 bits (70), Expect = 0.82
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 152 FFFFFXXXXFFFFFFFXXXXF 214
FFFFF FFFFFFF F
Sbjct: 87 FFFFFFFFFFFFFFFFFFFFF 107
Score = 32.3 bits (70), Expect = 0.82
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 152 FFFFFXXXXFFFFFFFXXXXF 214
FFFFF FFFFFFF F
Sbjct: 88 FFFFFFFFFFFFFFFFFFFFF 108
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 2.5
Identities = 30/146 (20%), Positives = 35/146 (23%), Gaps = 1/146 (0%)
Frame = +2
Query: 662 PPXPXXPKGXPPXPQ-KXXXXXXXXXXXXKEKXXXXXXXQXPPXKGXGXKXXXXXXXKTP 838
PP P P PP Q K PP + +P
Sbjct: 162 PPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSP 221
Query: 839 PPPPPXXXPXXXXXXXXXXXXXXQXXXXXXRPKKXXKKXXXXKXXPXXXXKXXXPPXPXK 1018
PPPPP P Q P+ K + P PP P
Sbjct: 222 PPPPPTVPPRTPGDTPAVVEPKPQPPPPP--PRAPVKMPRVLEPKPSPPPPSPLPPPPED 279
Query: 1019 XKNPXXXPXXXXGGGXPPPXKKKXPP 1096
+P PPP PP
Sbjct: 280 YWSPTAVTPPEPTKPKPPPPSPPPPP 305
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 2.5
Identities = 24/92 (26%), Positives = 24/92 (26%), Gaps = 6/92 (6%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKXKKKXXXXKX----PPXXXXXXXPP 1004
PPPP PPPPP PP P
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAP 361
Query: 1005 XPPGXKKTXXXXPXXXG--GGGXPPPXKKXXP 1094
PPG P G GGG PPP P
Sbjct: 362 RPPGPGPGPPPPPGAAGRGGGGPPPPALPGGP 393
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 908 GGGGGXXFFFFXGXXGXXXGGGGG 837
GGGGG F G G GGGGG
Sbjct: 32 GGGGGVGGVFIPGIIGGGGGGGGG 55
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 908 GGGGGXXFFFFXGXXGXXXGGGGGXFXXFXXXXFXPPXP 792
GGGGG G G GGGGG + + PP P
Sbjct: 68 GGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPGP 106
>01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = -3
Query: 1043 GGGXXGFFXSXGXGGXXXXXXXXGXFXXXXFFFXFFXXGXXXXXXGGGGGXXFFFFXGXX 864
GGG G G GG G + + G GGGGG + G
Sbjct: 46 GGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGGGGGGG 105
Query: 863 GXXXGGGGG 837
GGGGG
Sbjct: 106 RGGGGGGGG 114
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 941 FFXXGXXXXXXGGGGGXXFFFFXGXXGXXXGGGGGXF 831
F G GGGGG + G G GGGGG +
Sbjct: 42 FVGGGGGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGY 78
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/86 (22%), Positives = 21/86 (24%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPPXXXXXXXXXKKXKKKXXXXKXPPXXXXXXXPPXPPG 1016
PPPP ++KK PP K PP PP P
Sbjct: 511 PPPPSSGWLPKSPERKKAPPPQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPE 570
Query: 1017 XKKTXXXXPXXXGGGGXPPPXKKXXP 1094
G P P K P
Sbjct: 571 GHTPSPPKSGPPAGESPPTPESKASP 596
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 253 GGXXXXXXXXKXXKXXXXKKKKKKKXXXXKKKKK 152
GG K K KKKKKKK KKKKK
Sbjct: 21 GGLRGLPKKKKKKKKKKKKKKKKKKKKKKKKKKK 54
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.9 bits (64), Expect = 4.4
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = -3
Query: 1073 GGXPPPPXXXGGGXXGFFXSXGXGGXXXXXXXXGXFXXXXFFFXFFXXGXXXXXXGGGGG 894
GG GGG G F G GG G F G GGGGG
Sbjct: 157 GGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGKEGGFGAGGGVGG--GAGGGGGMGGGGGG 214
Query: 893 XXFFFFXGXXGXXXGGGGG 837
F G G G GGG
Sbjct: 215 G--FGGGGGKGGGFGAGGG 231
>03_03_0193 -
15312568-15312753,15312811-15312933,15313112-15313134,
15313196-15313349,15314443-15314754
Length = 265
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 905 GGGGXXFFFFXGXXGXXXGGGGG 837
GGGG FF G G GGGGG
Sbjct: 46 GGGGGHFFGGGGGRGRGGGGGGG 68
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3
Query: 908 GGGGGXXFFFFXGXXGXXXGGGGG 837
GGGGG FF G G GGGGG
Sbjct: 46 GGGGGH---FFGGGGGRGRGGGGG 66
>01_01_0482 + 3535083-3535194,3535301-3535467
Length = 92
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 780 PPXXRGXGXKXXXXKXXKXPPPPPXXXXXXXXKKKKXXPPPPP 908
PP G G + + PPPP PPPPP
Sbjct: 48 PPPQHGAGRRLLSTQNQVTPPPPAPVSSPPIGPAPTLLPPPPP 90
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 1252 GGGXXXXXFFXXGGGGXXFXXPPPPPXXXXFF 1157
GGG + GGGG + PPPP +F
Sbjct: 119 GGGGGGGGWQQGGGGGGAYPTPPPPNPFLPYF 150
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 29.1 bits (62), Expect = 7.7
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +3
Query: 765 PXXXXPPXXRGXGXKXXXXKXXKXPPPPPXXXXXXXXKKKKXXPPP--PP 908
P PP K K + PPPPP ++ PPP PP
Sbjct: 92 PPPSLPPPVNTGKKKWKKDKRKEIPPPPPLAETPPPMNERPPTPPPVQPP 141
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP K PPPPP
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPPP 354
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP K PPPPP
Sbjct: 332 PPPPPPPSRFNNTTPKPPPPPPPP 355
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.1 bits (62), Expect = 7.7
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
Frame = -3
Query: 1073 GGXPPPPXXXGGGXXGFFXSXGXGGXXXXXXXXGXFXXXXFFFXF------FXXGXXXXX 912
GG GGG G F G GG G F G
Sbjct: 152 GGGSGTGGGLGGGGGGGFGGGGGGGIGGGGGKGGGFGAGGGVGGAAGGGGGMGSGGGGGF 211
Query: 911 XGGGGGXXFFFFXGXXGXXXGGGGG 837
GGGG F G G GGGGG
Sbjct: 212 GGGGGKGGGFGAGGVMGGGAGGGGG 236
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPP-PPXXXXXXXXXKKXKKKXXXXKXP--PXXXXXXXPPX 1007
PPPPP KK PPP PP +K P P PP
Sbjct: 128 PPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPS 187
Query: 1008 PP 1013
PP
Sbjct: 188 PP 189
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP K PPPPP
Sbjct: 1932 PPPPPPPPVEGKPKPPPHAPPPPP 1955
>04_03_0803 - 19835284-19836050,19836337-19836418
Length = 282
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 782 PPXKGXGXKXXXXXXXKTPPPPPPXXXP 865
P G G K TPPPPPP P
Sbjct: 109 PKVDGAGNKGEKQPKTTTPPPPPPVPLP 136
>04_03_0660 + 18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 1000 PPXPXEXKKPXXPPPXXXGGGG 1065
PP P P PPP GGGG
Sbjct: 55 PPPPPTQPAPPPPPPARSGGGG 76
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP KK+ PPPP
Sbjct: 173 PPPPPAPEPEPEPPKKEEPQPPPP 196
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP K PPPPP
Sbjct: 356 PPPPPPPPPPKLNTAPKPPPPPPP 379
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP K PPPPP
Sbjct: 357 PPPPPPPPPKLNTAPKPPPPPPPP 380
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 837 PPPPPXXXXXXXXKKKKXXPPPPP 908
PPPPP K PPPPP
Sbjct: 358 PPPPPPPPKLNTAPKPPPPPPPPP 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.154 0.537
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,531,107
Number of Sequences: 37544
Number of extensions: 574809
Number of successful extensions: 6170
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4549
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3864364464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -