Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L16
         (1182 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0975 - 12836667-12836791,12838422-12838648,12838721-128387...    71   2e-12

>03_02_0975 -
           12836667-12836791,12838422-12838648,12838721-12838785,
           12839292-12839407,12839514-12839771,12839937-12840195,
           12840308-12840412
          Length = 384

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 28/263 (10%)
 Frame = +1

Query: 280 VHTLARFGXELYLESLPDCILLXTLNAAESAYAMIXXXXXXXXXXXXXXXXTED----NE 447
           V  LAR G +L L++ P  + L TLN++ SAYA I                  D    + 
Sbjct: 17  VTCLARVGSDLVLQAHPAKLELHTLNSSRSAYASISLARDFFDEFSLSAAAAADSAPSST 76

Query: 448 GLKCKISMKSALNAFKSP-AHIDKQVESLEMKLDPESCKLIFCLKCKHGIVKTHFVSILD 624
            L+C + +KS L+  ++P A +D+   SL    +P++ KL   L C +G+ KT++++   
Sbjct: 77  PLQCSVLLKSVLSVLRTPTAALDRIAASLP---NPDAPKLQLTLHCLNGVKKTYWIA--- 130

Query: 625 CKAMQAVYT----KDTVPNRITSPQRILNETLNSFQTSDDQVTLEATT------------ 756
           C A   V T    +    +R+    R L   L++FQ+S  ++T+ AT             
Sbjct: 131 CSAESEVQTLALDRSNFSSRLAIRPRDLARLLSNFQSSLQELTVIATDPAAGLSNVGVDG 190

Query: 757 ----KSLVIKNYID-SNMDLTKIIRTHVSLDPA-EFDNYI-IGEETTITFTLKEFRXXXX 915
               K++ +++YID +  D    + T + +DP  EF  Y+  G+   +TF +KE +    
Sbjct: 191 EIEGKAVELRSYIDPTKDDCDTRLHTQLWIDPTEEFVEYVHSGDSVDVTFGVKELKAFLT 250

Query: 916 XXXXXXXPXQLHFETTGRXAVFI 984
                     L F+  G   + +
Sbjct: 251 FCEGCEVDILLFFQKAGEPVLLV 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,437,702
Number of Sequences: 37544
Number of extensions: 371713
Number of successful extensions: 620
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3619930760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)