Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L16
(1182 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061116-1|AAL28664.1| 456|Drosophila melanogaster LD10092p pro... 118 2e-26
AF124502-1|AAD31691.1| 456|Drosophila melanogaster DNA repair p... 118 2e-26
AF076846-1|AAC95528.1| 456|Drosophila melanogaster Rad9-like pr... 118 2e-26
AE014296-3070|AAF49221.1| 456|Drosophila melanogaster CG3945-PA... 118 2e-26
>AY061116-1|AAL28664.1| 456|Drosophila melanogaster LD10092p protein.
Length = 456
Score = 118 bits (283), Expect = 2e-26
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Frame = +1
Query: 238 MKCHVPGPNVK--AXTVHTLARFGXELYLESLPDCILLXTLNAAESAYAMIXXXXXXXXX 411
MK + G N + A V +L++ G E+++E + + +NA +SA I
Sbjct: 1 MKYTLEGSNARVIAKAVQSLSKVGKEMFIEIDQQSLQMRAINATQSAVGSISFKRSMFEV 60
Query: 412 XXXXXXXTEDNEGLKCKISMKSALNAFKSPAHIDKQVESLEMKLDPESCKLIFCLKCKHG 591
+ CKISMK L F++ +VE E+ L L L+CK
Sbjct: 61 YDMPP-----HSDFYCKISMKGCLAVFRNM----NEVEYCELNLLDNQTNLQVNLRCKLE 111
Query: 592 IVKTHFVSILDCKAMQAVYTKDTVPNRITSPQRILNETLNSFQTSDDQVTLEATTKSLVI 771
K +SI+D + + D +PN I ++L + N+F +S++++TLEA + S+V
Sbjct: 112 TTKEATISIIDDQNINTNINTDQMPNIIRGDHKLLTDISNNFNSSEEELTLEANSGSVVA 171
Query: 772 KNYIDSNMDLTKIIRTHVSLDPAEFDNYIIGEETTITFTLKEFRXXXXXXXXXXXPXQLH 951
KNYI+ K +RT + L P+EF+ Y + +ET ITF +KEFR L
Sbjct: 172 KNYIEGARVNDKFMRTQLKLKPSEFEQYQVTKETVITFCIKEFRAFLLFAECLNASLTLE 231
Query: 952 FETTGRXAVFIVXNGTTLEAHLGLATSKPD 1041
F+ G + + +E L ++T PD
Sbjct: 232 FDEAGMPFLLKIKKHGEIECLLIMSTLSPD 261
>AF124502-1|AAD31691.1| 456|Drosophila melanogaster DNA repair
protein Rad9 protein.
Length = 456
Score = 118 bits (283), Expect = 2e-26
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Frame = +1
Query: 238 MKCHVPGPNVK--AXTVHTLARFGXELYLESLPDCILLXTLNAAESAYAMIXXXXXXXXX 411
MK + G N + A V +L++ G E+++E + + +NA +SA I
Sbjct: 1 MKYTLEGSNARVIAKAVQSLSKVGKEMFIEIDQQSLQMRAINATQSAVGSISFKRSMFEV 60
Query: 412 XXXXXXXTEDNEGLKCKISMKSALNAFKSPAHIDKQVESLEMKLDPESCKLIFCLKCKHG 591
+ CKISMK L F++ +VE E+ L L L+CK
Sbjct: 61 YDMPP-----HSDFYCKISMKGCLAVFRNM----NEVEYCELNLLDNQTNLQVNLRCKLE 111
Query: 592 IVKTHFVSILDCKAMQAVYTKDTVPNRITSPQRILNETLNSFQTSDDQVTLEATTKSLVI 771
K +SI+D + + D +PN I ++L + N+F +S++++TLEA + S+V
Sbjct: 112 TTKEATISIIDDQNINTNINTDQMPNIIRGDHKLLTDISNNFNSSEEELTLEANSGSVVA 171
Query: 772 KNYIDSNMDLTKIIRTHVSLDPAEFDNYIIGEETTITFTLKEFRXXXXXXXXXXXPXQLH 951
KNYI+ K +RT + L P+EF+ Y + +ET ITF +KEFR L
Sbjct: 172 KNYIEGARVNDKFMRTQLKLKPSEFEQYQVTKETVITFCIKEFRAFLLFAECLNASLTLE 231
Query: 952 FETTGRXAVFIVXNGTTLEAHLGLATSKPD 1041
F+ G + + +E L ++T PD
Sbjct: 232 FDEAGMPFLLKIKKHGEIECLLIMSTLSPD 261
>AF076846-1|AAC95528.1| 456|Drosophila melanogaster Rad9-like protein
protein.
Length = 456
Score = 118 bits (283), Expect = 2e-26
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Frame = +1
Query: 238 MKCHVPGPNVK--AXTVHTLARFGXELYLESLPDCILLXTLNAAESAYAMIXXXXXXXXX 411
MK + G N + A V +L++ G E+++E + + +NA +SA I
Sbjct: 1 MKYTLEGSNARVIAKAVQSLSKVGKEMFIEIDQQSLQMRAINATQSAVGSISFKRSMFEV 60
Query: 412 XXXXXXXTEDNEGLKCKISMKSALNAFKSPAHIDKQVESLEMKLDPESCKLIFCLKCKHG 591
+ CKISMK L F++ +VE E+ L L L+CK
Sbjct: 61 YDMPP-----HSDFYCKISMKGCLAVFRNM----NEVEYCELNLLDNQTNLQVNLRCKLE 111
Query: 592 IVKTHFVSILDCKAMQAVYTKDTVPNRITSPQRILNETLNSFQTSDDQVTLEATTKSLVI 771
K +SI+D + + D +PN I ++L + N+F +S++++TLEA + S+V
Sbjct: 112 TTKEATISIIDDQNINTNINTDQMPNIIRGDHKLLTDISNNFNSSEEELTLEANSGSVVA 171
Query: 772 KNYIDSNMDLTKIIRTHVSLDPAEFDNYIIGEETTITFTLKEFRXXXXXXXXXXXPXQLH 951
KNYI+ K +RT + L P+EF+ Y + +ET ITF +KEFR L
Sbjct: 172 KNYIEGARVNDKFMRTQLKLKPSEFEQYQVTKETVITFCIKEFRAFLLFAECLNASLTLE 231
Query: 952 FETTGRXAVFIVXNGTTLEAHLGLATSKPD 1041
F+ G + + +E L ++T PD
Sbjct: 232 FDEAGMPFLLKIKKHGEIECLLIMSTLSPD 261
>AE014296-3070|AAF49221.1| 456|Drosophila melanogaster CG3945-PA
protein.
Length = 456
Score = 118 bits (283), Expect = 2e-26
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Frame = +1
Query: 238 MKCHVPGPNVK--AXTVHTLARFGXELYLESLPDCILLXTLNAAESAYAMIXXXXXXXXX 411
MK + G N + A V +L++ G E+++E + + +NA +SA I
Sbjct: 1 MKYTLEGSNARVIAKAVQSLSKVGKEMFIEIDQQSLQMRAINATQSAVGSISFKRSMFEV 60
Query: 412 XXXXXXXTEDNEGLKCKISMKSALNAFKSPAHIDKQVESLEMKLDPESCKLIFCLKCKHG 591
+ CKISMK L F++ +VE E+ L L L+CK
Sbjct: 61 YDMPP-----HSDFYCKISMKGCLAVFRNM----NEVEYCELNLLDNQTNLQVNLRCKLE 111
Query: 592 IVKTHFVSILDCKAMQAVYTKDTVPNRITSPQRILNETLNSFQTSDDQVTLEATTKSLVI 771
K +SI+D + + D +PN I ++L + N+F +S++++TLEA + S+V
Sbjct: 112 TTKEATISIIDDQNINTNINTDQMPNIIRGDHKLLTDISNNFNSSEEELTLEANSGSVVA 171
Query: 772 KNYIDSNMDLTKIIRTHVSLDPAEFDNYIIGEETTITFTLKEFRXXXXXXXXXXXPXQLH 951
KNYI+ K +RT + L P+EF+ Y + +ET ITF +KEFR L
Sbjct: 172 KNYIEGARVNDKFMRTQLKLKPSEFEQYQVTKETVITFCIKEFRAFLLFAECLNASLTLE 231
Query: 952 FETTGRXAVFIVXNGTTLEAHLGLATSKPD 1041
F+ G + + +E L ++T PD
Sbjct: 232 FDEAGMPFLLKIKKHGEIECLLIMSTLSPD 261
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,617,277
Number of Sequences: 53049
Number of extensions: 682652
Number of successful extensions: 1180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6270829278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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