Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L16
         (1182 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.3  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   5.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   6.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 14/74 (18%), Positives = 30/74 (40%)
 Frame = +1

Query: 595  VKTHFVSILDCKAMQAVYTKDTVPNRITSPQRILNETLNSFQTSDDQVTLEATTKSLVIK 774
            VK H  + +DC      Y  +    +   P  +++ +  +   ++D+ T    T+S   +
Sbjct: 955  VKKHITTTIDCSTQSEYYELEVKDQKNGKPPSVVSRSTQT-SANNDKDTNAVVTQSKEAR 1013

Query: 775  NYIDSNMDLTKIIR 816
            + I +   L    R
Sbjct: 1014 DNITATKQLNNKAR 1027


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 571 CLKCKHGIVKTHFVSILDC 627
           C KCK+GI  +    I+ C
Sbjct: 43  CHKCKYGIAMSSACGIVQC 61


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 302 EXNYTWSHYPTVY 340
           E  Y WSH+P V+
Sbjct: 110 EIYYIWSHFPYVF 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,827
Number of Sequences: 438
Number of extensions: 4872
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40247334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)