Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L14
(1248 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.004
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.004
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.015
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.015
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.015
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 37 0.026
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 35 0.14
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 35 0.14
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.24
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.32
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.32
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.32
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.42
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 33 0.42
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.56
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.56
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.74
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.74
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.74
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.97
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 31 1.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 1.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 2.2
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 3.0
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 3.0
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 3.0
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 3.0
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 3.9
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 3.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 3.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 3.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.9
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 5.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 5.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 5.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.2
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 25 5.5
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.9
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 6.9
U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical p... 29 6.9
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 6.9
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 6.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 9.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 9.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 9.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 9.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 9.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/89 (31%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
PA P PP PP G P G PPP+ PP PP P G+
Sbjct: 233 PAGSP--PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSP 289
Query: 932 PP----XXPXPXXXXXXPPTRPXPXXXXG 1006
PP P P PPT P G
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
Score = 37.1 bits (82), Expect = 0.026
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPP-XXPNRPXXXPXPI 932
PP P P GS P P G PPP G P P P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 933 PXPPQXRXXXXXXPPP 980
P PP+ PPP
Sbjct: 300 PPPPRGSPPTGSLPPP 315
Score = 35.9 bits (79), Expect = 0.060
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXP--G 925
P G PP P G P G PPP G + PP PP P P G
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPRAGSPPPPPPPRG 305
Query: 926 TXPPXXPXPXXXXXXPP 976
+ P P PP
Sbjct: 306 SPPTGSLPPPQAGGSPP 322
Score = 31.1 bits (67), Expect = 1.7
Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Frame = +2
Query: 713 SPXKLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPP 892
SP P A S P T G PP PP G P GG PPP+ + PP
Sbjct: 254 SPPPPPAAGSPPPPRT--GSPPP-PPTGS--------PPPPPAGGSPPPPRAGSPPPPPP 302
Query: 893 XXXEPPXPXPGTXPP----XXPXPXXXXXXPP 976
PP G+ PP P P PP
Sbjct: 303 PRGSPP---TGSLPPPQAGGSPPPAGTGSPPP 331
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = -2
Query: 512 PPLGXXIPXAAXGRP-----SAPXQXPXXXGGRPIXKPPXPAAXGRXXHXGXTSHPSP 354
PP G P A G P +P P G P P P A G G S P P
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 29.5 bits (63), Expect = 5.2
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIP 935
PP P P P R P G PP G +PP P P P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG----SPP-----PAGTGSPPP 331
Query: 936 XPPQXRXXXXXXPPPGXXP 992
P Q R PP G P
Sbjct: 332 PPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/89 (31%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
PA P PP PP G P G PPP+ PP PP P G+
Sbjct: 254 PAGSP--PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSP 310
Query: 932 PP----XXPXPXXXXXXPPTRPXPXXXXG 1006
PP P P PPT P G
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
Score = 37.1 bits (82), Expect = 0.026
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPP-XXPNRPXXXPXPI 932
PP P P GS P P G PPP G P P P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 933 PXPPQXRXXXXXXPPP 980
P PP+ PPP
Sbjct: 321 PPPPRGSPPTGSLPPP 336
Score = 35.9 bits (79), Expect = 0.060
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXP--G 925
P G PP P G P G PPP G + PP PP P P G
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPRAGSPPPPPPPRG 326
Query: 926 TXPPXXPXPXXXXXXPP 976
+ P P PP
Sbjct: 327 SPPTGSLPPPQAGGSPP 343
Score = 31.1 bits (67), Expect = 1.7
Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Frame = +2
Query: 713 SPXKLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPP 892
SP P A S P T G PP PP G P GG PPP+ + PP
Sbjct: 275 SPPPPPAAGSPPPPRT--GSPPP-PPTGS--------PPPPPAGGSPPPPRAGSPPPPPP 323
Query: 893 XXXEPPXPXPGTXPP----XXPXPXXXXXXPP 976
PP G+ PP P P PP
Sbjct: 324 PRGSPP---TGSLPPPQAGGSPPPAGTGSPPP 352
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = -2
Query: 512 PPLGXXIPXAAXGRP-----SAPXQXPXXXGGRPIXKPPXPAAXGRXXHXGXTSHPSP 354
PP G P A G P +P P G P P P A G G S P P
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 29.5 bits (63), Expect = 5.2
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIP 935
PP P P P R P G PP G +PP P P P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG----SPP-----PAGTGSPPP 352
Query: 936 XPPQXRXXXXXXPPPGXXP 992
P Q R PP G P
Sbjct: 353 PPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/89 (31%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
PA P PP PP G P G PPP+ PP PP P G+
Sbjct: 239 PAGSP--PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSP 295
Query: 932 PP----XXPXPXXXXXXPPTRPXPXXXXG 1006
PP P P PPT P G
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
Score = 37.1 bits (82), Expect = 0.026
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPP-XXPNRPXXXPXPI 932
PP P P GS P P G PPP G P P P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 933 PXPPQXRXXXXXXPPP 980
P PP+ PPP
Sbjct: 306 PPPPRGSPPTGSLPPP 321
Score = 35.9 bits (79), Expect = 0.060
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXP--G 925
P G PP P G P G PPP G + PP PP P P G
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPRAGSPPPPPPPRG 311
Query: 926 TXPPXXPXPXXXXXXPP 976
+ P P PP
Sbjct: 312 SPPTGSLPPPQAGGSPP 328
Score = 31.1 bits (67), Expect = 1.7
Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Frame = +2
Query: 713 SPXKLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPP 892
SP P A S P T G PP PP G P GG PPP+ + PP
Sbjct: 260 SPPPPPAAGSPPPPRT--GSPPP-PPTGS--------PPPPPAGGSPPPPRAGSPPPPPP 308
Query: 893 XXXEPPXPXPGTXPP----XXPXPXXXXXXPP 976
PP G+ PP P P PP
Sbjct: 309 PRGSPP---TGSLPPPQAGGSPPPAGTGSPPP 337
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = -2
Query: 512 PPLGXXIPXAAXGRP-----SAPXQXPXXXGGRPIXKPPXPAAXGRXXHXGXTSHPSP 354
PP G P A G P +P P G P P P A G G S P P
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 29.5 bits (63), Expect = 5.2
Identities = 23/79 (29%), Positives = 24/79 (30%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIP 935
PP P P P R P G PP G +PP P P P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG----SPP-----PAGTGSPPP 337
Query: 936 XPPQXRXXXXXXPPPGXXP 992
P Q R PP G P
Sbjct: 338 PPRQKRQAPERSPPTGSPP 356
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.015
Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIP 935
PP P P G P T P GG PP +G PP P P P P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--PPISG----GPPPPPPPPGGCPPPPP 773
Query: 936 XPPQX--RXXXXXXPPPG 983
PP + PPPG
Sbjct: 774 PPPPGGFKGGPPPPPPPG 791
Score = 35.9 bits (79), Expect = 0.060
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +2
Query: 752 PATXPGXPPXX---PPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXP 922
P PG PP PP G L P+ + G PPP G PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP---PI--TGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 923 GTXPPXXPXPXXXXXXPPTRPXP 991
PP P P PP P P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 34.7 bits (76), Expect = 0.14
Identities = 26/77 (33%), Positives = 27/77 (35%)
Frame = +3
Query: 750 TXPPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXP 929
T P P P LP P T P GG PP +G PP P P P P
Sbjct: 723 TGGPPPPPPPGGLP-----PITGGPPPPPPPGGL--PPISG----GPPPPPPPPGGCPPP 771
Query: 930 IPXPPQXRXXXXXXPPP 980
P PP PPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.24
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +2
Query: 767 GXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX----- 931
G PP PP G + P GG P G PP PP P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 932 PPXXPXPXXXXXXPPTRP 985
PP P P P P
Sbjct: 784 PPPPPPPGMFAPMAPVIP 801
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/99 (25%), Positives = 28/99 (28%), Gaps = 2/99 (2%)
Frame = +2
Query: 716 PXKLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPX 895
P P ++ P+T G PP P PPP G P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 896 XXEPPXPXP--GTXPPXXPXPXXXXXXPPTRPXPXXXXG 1006
PP P PP P P PP P P G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.015
Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIP 935
PP P P G P T P GG PP +G PP P P P P P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--PPISG----GPPPPPPPPGGCPPPPP 773
Query: 936 XPPQX--RXXXXXXPPPG 983
PP + PPPG
Sbjct: 774 PPPPGGFKGGPPPPPPPG 791
Score = 35.9 bits (79), Expect = 0.060
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +2
Query: 752 PATXPGXPPXX---PPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXP 922
P PG PP PP G L P+ + G PPP G PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLP---PI--TGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 923 GTXPPXXPXPXXXXXXPPTRPXP 991
PP P P PP P P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 34.7 bits (76), Expect = 0.14
Identities = 26/77 (33%), Positives = 27/77 (35%)
Frame = +3
Query: 750 TXPPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXP 929
T P P P LP P T P GG PP +G PP P P P P
Sbjct: 723 TGGPPPPPPPGGLP-----PITGGPPPPPPPGGL--PPISG----GPPPPPPPPGGCPPP 771
Query: 930 IPXPPQXRXXXXXXPPP 980
P PP PPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.24
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +2
Query: 767 GXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX----- 931
G PP PP G + P GG P G PP PP P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 932 PPXXPXPXXXXXXPPTRP 985
PP P P P P
Sbjct: 784 PPPPPPPGMFAPMAPVIP 801
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/99 (25%), Positives = 28/99 (28%), Gaps = 2/99 (2%)
Frame = +2
Query: 716 PXKLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPX 895
P P ++ P+T G PP P PPP G P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 896 XXEPPXPXP--GTXPPXXPXPXXXXXXPPTRPXPXXXXG 1006
PP P PP P P PP P P G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.015
Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIP 935
PP P P G P T P GG PP +G PP P P P P P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGL--PPISG----GPPPPPPPPGGCPPPPP 356
Query: 936 XPPQX--RXXXXXXPPPG 983
PP + PPPG
Sbjct: 357 PPPPGGFKGGPPPPPPPG 374
Score = 35.9 bits (79), Expect = 0.060
Identities = 26/83 (31%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +2
Query: 752 PATXPGXPPXX---PPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXP 922
P PG PP PP G L P+ + G PPP G PP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLP---PI--TGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 923 GTXPPXXPXPXXXXXXPPTRPXP 991
PP P P PP P P
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPP 373
Score = 34.7 bits (76), Expect = 0.14
Identities = 26/77 (33%), Positives = 27/77 (35%)
Frame = +3
Query: 750 TXPPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXP 929
T P P P LP P T P GG PP +G PP P P P P
Sbjct: 306 TGGPPPPPPPGGLP-----PITGGPPPPPPPGGL--PPISG----GPPPPPPPPGGCPPP 354
Query: 930 IPXPPQXRXXXXXXPPP 980
P PP PPP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 33.9 bits (74), Expect = 0.24
Identities = 23/78 (29%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Frame = +2
Query: 767 GXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX----- 931
G PP PP G + P GG P G PP PP P P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 932 PPXXPXPXXXXXXPPTRP 985
PP P P P P
Sbjct: 367 PPPPPPPGMFAPMAPVIP 384
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/99 (25%), Positives = 28/99 (28%), Gaps = 2/99 (2%)
Frame = +2
Query: 716 PXKLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPX 895
P P ++ P+T G PP P PPP G P
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Query: 896 XXEPPXPXP--GTXPPXXPXPXXXXXXPPTRPXPXXXXG 1006
PP P PP P P PP P P G
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 37.1 bits (82), Expect = 0.026
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +2
Query: 803 GXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXPXXXXXXP 973
G L H N G PPP+G + PP P P G PP P P P
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 845 GXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRPXPXXXXG 1006
G PPPQG PP +P P PG PP P P P P G
Sbjct: 679 GPPPPPQGQQYYGGPPPPGQPYGP-PGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 845 GXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRPXPXXXXG 1006
G PPPQG PP +P P PG PP P P P P G
Sbjct: 679 GPPPPPQGQQYYGGPPPPGQPYGP-PGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.24
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
Frame = +2
Query: 749 HPATXPGXPPXXPPXGKRGXLHXTHP-------VXNSXGGXXPPPQGWAXXXKPPXXXEP 907
+P P P PP L HP V G P PQ PP P
Sbjct: 69 YPPPYPYQHPHQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPP 128
Query: 908 PXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
G P P P PP R P
Sbjct: 129 RKSRAGGSSPPPPPPPRVPRTPPPRSPP 156
Score = 29.1 bits (62), Expect = 6.9
Identities = 28/103 (27%), Positives = 30/103 (29%), Gaps = 11/103 (10%)
Frame = +2
Query: 716 PXKLPXALSCXHPATXPGXP-PXXPPXGKRGXLHXTH---------PVXNSXGGXXPPPQ 865
P P L HP PG P P H H P + GG PPP
Sbjct: 82 PPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPP 141
Query: 866 GWAXXXK-PPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
+ PP PP P T P P P R P
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Score = 28.7 bits (61), Expect = 9.1
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNR-PXXXPXPI 932
PP P R GS P R PPP+ R PP R P P P
Sbjct: 123 PPPPPPRKSR-AGGSSPPPPPPPRVPRTPPPRSPPPR--RPPMTPPSPQRRPPRTPPSPE 179
Query: 933 PXPPQXRXXXXXXPPP 980
P P PPP
Sbjct: 180 PRNPPRTPPSPIPPPP 195
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -2
Query: 521 AGXPPLGXXIPXAAXGRPSAPXQXPXXXGGRPIXKPPXPAA 399
A PP+G P A G P P P G P PP P A
Sbjct: 217 APPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 257
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -2
Query: 521 AGXPPLGXXIPXAAXGRPSAPXQXPXXXGGRPIXKPPXPAA 399
A PP+G P A G P P P G P PP P A
Sbjct: 203 APPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -2
Query: 521 AGXPPLGXXIPXAAXGRPSAPXQXPXXXGGRPIXKPPXPAA 399
A PP+G P A G P P P G P PP P A
Sbjct: 203 APPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPPA 243
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 943 GGXGXGXGXXXGRFGXXGGFXXXRPALGGGXXPPXG 836
GG G G G GR G GGF R GG P G
Sbjct: 258 GGEGGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGG 293
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 943 GGXGXGXGXXXGRFGXXGGFXXXRPALGGGXXPPXG 836
GG G G G GR G GGF R GG P G
Sbjct: 258 GGEGGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGG 293
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.56
Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNR---PXXXPX 926
PP P P P P T +TP PPP +G PP P R P P
Sbjct: 261 PPVPPPPPSVTPMPPPMP---PTPGMTPR--PPPPPSSGMWPPPPPPPPGRTPGPPGMPG 315
Query: 927 PIPXPPQXRXXXXXXPPPGXXPLXXXD*XXXRXXGG 1034
P PP R PPG + R GG
Sbjct: 316 MPPPPPPSRFG-----PPGMGGMPPPPPPGMRYPGG 346
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = +3
Query: 765 PXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPP-----KAGRXXXNPPXXPNRPXXXPXP 929
P P P T G PPP ++G PP P P P P
Sbjct: 215 PLGVPANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMP 274
Query: 930 IPXPPQXRXXXXXXPPP 980
P PP PPP
Sbjct: 275 PPMPPTPGMTPRPPPPP 291
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNR---PXXXPX 926
PP P T P P P + P P G PP P+R P
Sbjct: 275 PPMPPT-PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 927 PIPXPPQXRXXXXXXPPP 980
P P PP R PPP
Sbjct: 334 PPPPPPGMRYPGGMPPPP 351
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 3/81 (3%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
P P P PP + P S G PPP PP P PG
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP------PPPPGRTPGPPGMPGMP 317
Query: 932 PPXXP---XPXXXXXXPPTRP 985
PP P P PP P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPP 338
Score = 29.9 bits (64), Expect = 3.9
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 12/77 (15%)
Frame = +2
Query: 752 PATXPGXPPXXPPX-----GKRGXLHXTHPVXNSXGGXXPP-----PQGWAXXXKPPXXX 901
P PG PP PP G G P GG PP P PP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 902 EPPXPXP--GTXPPXXP 946
PP P G PP P
Sbjct: 370 RPPAPPSGHGMIPPPPP 386
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 764 PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXX 943
PG P PP G P G P P G PP P G PP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPP---PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 944 PXPXXXXXXPPTRPXP 991
P P P P
Sbjct: 338 PPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.56
Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNR---PXXXPX 926
PP P P P P T +TP PPP +G PP P R P P
Sbjct: 271 PPVPPPPPSVTPMPPPMP---PTPGMTPR--PPPPPSSGMWPPPPPPPPGRTPGPPGMPG 325
Query: 927 PIPXPPQXRXXXXXXPPPGXXPLXXXD*XXXRXXGG 1034
P PP R PPG + R GG
Sbjct: 326 MPPPPPPSRFG-----PPGMGGMPPPPPPGMRYPGG 356
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = +3
Query: 765 PXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPP-----KAGRXXXNPPXXPNRPXXXPXP 929
P P P T G PPP ++G PP P P P P
Sbjct: 225 PLGVPANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMP 284
Query: 930 IPXPPQXRXXXXXXPPP 980
P PP PPP
Sbjct: 285 PPMPPTPGMTPRPPPPP 301
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNR---PXXXPX 926
PP P T P P P + P P G PP P+R P
Sbjct: 285 PPMPPT-PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 927 PIPXPPQXRXXXXXXPPP 980
P P PP R PPP
Sbjct: 344 PPPPPPGMRYPGGMPPPP 361
Score = 29.9 bits (64), Expect = 3.9
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 3/81 (3%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
P P P PP + P S G PPP PP P PG
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP------PPPPGRTPGPPGMPGMP 327
Query: 932 PPXXP---XPXXXXXXPPTRP 985
PP P P PP P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPP 348
Score = 29.9 bits (64), Expect = 3.9
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 12/77 (15%)
Frame = +2
Query: 752 PATXPGXPPXXPPX-----GKRGXLHXTHPVXNSXGGXXPP-----PQGWAXXXKPPXXX 901
P PG PP PP G G P GG PP P PP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 902 EPPXPXP--GTXPPXXP 946
PP P G PP P
Sbjct: 380 RPPAPPSGHGMIPPPPP 396
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 764 PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXX 943
PG P PP G P G P P G PP P G PP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPP---PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 944 PXPXXXXXXPPTRPXP 991
P P P P
Sbjct: 348 PPGMRYPGGMPPPPPP 363
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.74
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Frame = +3
Query: 756 PPXPXTRPXXL--PXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXP 929
PP P + P + P + ++ T TP PPP + +P P P P
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPA--PPPPSRIPNPSPSPQPAEVSKSPPP 491
Query: 930 IPXPPQXRXXXXXXPPPGXXP 992
P P PPP P
Sbjct: 492 PPPLPPIATPSSVPPPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.74
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Frame = +3
Query: 756 PPXPXTRPXXL--PXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXP 929
PP P + P + P + ++ T TP PPP + +P P P P
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPA--PPPPSRIPNPSPSPQPAEVSKSPPP 498
Query: 930 IPXPPQXRXXXXXXPPPGXXP 992
P P PPP P
Sbjct: 499 PPPLPPIATPSSVPPPPPPPP 519
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.74
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +2
Query: 764 PGXPPXX--PPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPP--XPXPG 925
PG P PP G G P GG PPP G PP PP P PG
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.97
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 824 PVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
P GG PQG+ PP P P P P P P P P P
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQP-EPQPEPQPEPQP 134
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 884 KPPXXXEPPXPXPGTXPPXXPXP 952
+PP PP P P T PP P P
Sbjct: 49 RPPRPNRPPRPPPATPPPTTPAP 71
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = +2
Query: 773 PPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTXPP---XX 943
P PP + + +S PP+ A PP PP P P PP
Sbjct: 371 PQQAPPVRQNPPMPAVQQAPSSQQATQAPPKP-APQQAPPVQQNPPKPTPSPAPPAQKAQ 429
Query: 944 PXPXXXXXXPPTRP 985
P PPT P
Sbjct: 430 PVTQQQASAPPTSP 443
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 2.2
Identities = 26/94 (27%), Positives = 29/94 (30%), Gaps = 3/94 (3%)
Frame = +2
Query: 713 SPXKLPXALSCXHPATXPGXP-PXXPPXGKRGXLHXTHPVXNSXGGXXP--PPQGWAXXX 883
+P P + P T P P PP G G P G P P G
Sbjct: 688 TPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGP-----PGPQQHPGPYPGYPGYGPPGAM 742
Query: 884 KPPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRP 985
+PP PP P PP P P P P
Sbjct: 743 RPPAGFAPPPGAPYGYPPGAPPPAGFHPSHPQHP 776
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 943 GGXGXGXGXXXGRFGXXGG-FXXXRPALGGGXXPPXG 836
GG G G G G FG GG F P G PP G
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSG 519
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 3.0
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPP-PQGWAXXXKPPXXXEPPXPXPGT 928
PA G P G+ G P N+ GG P P G A PP P G
Sbjct: 225 PAGDAGSPGQPGAPGQPG-----RPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGV 279
Query: 929 XPPXXPXPXXXXXXPPTRPXPXXXXG 1006
PP P P P +P P G
Sbjct: 280 GPPGPPGP-SGRPGAPGQPGPDGQPG 304
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +3
Query: 777 PXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIPXPPQXRX 956
P P G P + P G PPP G PP R P +P PP
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPF-MPPPPH--- 326
Query: 957 XXXXXPPPGXXP 992
PP G P
Sbjct: 327 -FGMGPPRGFMP 337
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 3.0
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +3
Query: 777 PXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIPXPPQXRX 956
P P G P + P G PPP G PP R P +P PP
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPF-MPPPPH--- 326
Query: 957 XXXXXPPPGXXP 992
PP G P
Sbjct: 327 -FGMGPPRGFMP 337
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Frame = +2
Query: 857 PPQGWAXXXKPPXXXEPPX----PXPGTXPPXXPXPXXXXXXPPTRPXP 991
PP W PP PP P P PP P PP P P
Sbjct: 40 PPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEP 88
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 855 PPPKAGRXXXNPPXXPNRP-XXXPXPIPXPPQXRXXXXXXPPPGXXP 992
PPP R PP P P P P PP R PPP P
Sbjct: 40 PPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPP 86
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 991 GXXPGGGXXXXXXRXWGGXGXGXGXXXGRFGXXGGFXXXRPALGGG 854
G GGG WGG G G G +G GG GGG
Sbjct: 218 GGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGG 263
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 905 PPXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
PP P P + PP P P P RP P
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 905 PPXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
PP P P + PP P P P RP P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPP 326
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -3
Query: 991 GXXPGGGXXXXXXRXWGGXGXGXGXXXGRFGXXGGFXXXRPALGGG 854
G GGG +GG G G G G G GG +GGG
Sbjct: 168 GGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGG 213
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 5.2
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +2
Query: 743 CXHPATX-PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPX 919
C +P PG P P GK G N G P + P PP P
Sbjct: 101 CCNPGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
Query: 920 PGTXPPXXPXPXXXXXXP--PTRPXPXXXXG 1006
PP P P P P+ P P G
Sbjct: 159 GPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG 189
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 5.2
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +2
Query: 743 CXHPATX-PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPX 919
C +P PG P P GK G N G P + P PP P
Sbjct: 101 CCNPGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
Query: 920 PGTXPPXXPXPXXXXXXP--PTRPXPXXXXG 1006
PP P P P P+ P P G
Sbjct: 159 GPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG 189
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 854 PPPQGWAXXXKPPXXXEPPXPXPGTXPPXXP 946
PPP A PP PP P P PP P
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 854 PPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
P P PP P P PP P P PP P P
Sbjct: 46 PMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 5.2
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +2
Query: 743 CXHPATX-PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPX 919
C +P PG P P GK G N G P + P PP P
Sbjct: 101 CCNPGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
Query: 920 PGTXPPXXPXPXXXXXXP--PTRPXPXXXXG 1006
PP P P P P+ P P G
Sbjct: 159 GPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG 189
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 5.2
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +2
Query: 743 CXHPATX-PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPX 919
C +P PG P P GK G N G P + P PP P
Sbjct: 101 CCNPGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPA 158
Query: 920 PGTXPPXXPXPXXXXXXP--PTRPXPXXXXG 1006
PP P P P P+ P P G
Sbjct: 159 GPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG 189
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.2
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
P G PP PP G+ L N+ PPP+G PP G
Sbjct: 67 PPKGTGTPPP-PPTGEPQDLSAEE--GNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNA 123
Query: 932 PPXXPXPXXXXXXPPTRP 985
P P PP P
Sbjct: 124 SRRPPPPPKGTGSPPPPP 141
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
P G PP PP G+ L N+ PPP+G PP G
Sbjct: 99 PPKGTGTPPP-PPTGEPQDLSGE---GNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNA 154
Query: 932 PPXXPXPXXXXXXPPTRP 985
P P PP P
Sbjct: 155 SRRPPPPPKGTGSPPPPP 172
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
P G PP PP G+ L N+ PPP+G PP G
Sbjct: 130 PPKGTGSPPP-PPTGEPQDLSGE---GNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNA 185
Query: 932 PPXXPXPXXXXXXPPTRP 985
P P PP P
Sbjct: 186 SRRPPPPPKGTGTPPPPP 203
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 951 GXGXXGGXVPGXGXGGSXXXGG 886
G G G PG G GG+ GG
Sbjct: 58 GSGPGAGQQPGQGQGGNGGMGG 79
Score = 23.4 bits (48), Expect(2) = 5.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 789 GGKXGGXPGXVAGWXQESAXGSXLGETPWDF 697
GG+ GG PG G G G P +F
Sbjct: 78 GGQQGGQPGQGNGGMGGGQQGGNQGNNPGNF 108
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/88 (22%), Positives = 26/88 (29%)
Frame = +2
Query: 722 KLPXALSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXX 901
+ P A + PAT P PP + +P P P + P
Sbjct: 319 RAPPATTRAPPATTRPAPASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYP 378
Query: 902 EPPXPXPGTXPPXXPXPXXXXXXPPTRP 985
P P P P P PP +P
Sbjct: 379 SPSYPSPSYPSPSYPAEPAYSVPPPAKP 406
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +2
Query: 824 PVXNSXGGXXPPPQGWAXXXKPP----XXXEPPXPXPGTXPPXXPXPXXXXXXPPTRP 985
PV N G PPP G PP PP P G PP P P PP P
Sbjct: 68 PVPN---GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP--PPPMFGAPPPPPPP 120
Score = 29.1 bits (62), Expect = 6.9
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +2
Query: 824 PVXNSXGGXXPPPQGWAXXXKPPXXX--EPPXPXPGTXPPXXPXPXXXXXXPPTRPXP 991
P GG PPP +A PP P P P P P P P P P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 29.1 bits (62), Expect = 6.9
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Frame = +3
Query: 756 PPXPXTRPXXLPXGSXXPFTXXTRXV--TPXGGXXPP-PKAGRXXXNPPXXPNRPXXXPX 926
P T P P G+ P V TP PP P + P P P P
Sbjct: 91 PTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPVPHPPQITQMAPILPTSPAPPP- 149
Query: 927 PIPXPPQXRXXXXXXPPPGXXPL 995
PIP PPQ P PL
Sbjct: 150 PIPHPPQRAQMNCLPLPQTFQPL 172
>U97002-11|AAY86259.1| 121|Caenorhabditis elegans Hypothetical
protein K09H11.11 protein.
Length = 121
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 884 KPPXXXEPPXPXPGTXPP 937
KPP +PP P PG PP
Sbjct: 6 KPPPGQQPPPPPPGQQPP 23
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 854 PPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXP 952
PPP P PP P P + PP P P
Sbjct: 265 PPPPNIPLPTIPQEVQSPPSPRPTSVPPPIPSP 297
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 854 PPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXP 952
PPP P PP P P + PP P P
Sbjct: 265 PPPPNIPLPTIPQEVQSPPSPRPTSVPPPIPSP 297
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Frame = +2
Query: 737 LSCXHPATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPP---QGWAXXXKPPXXXEP 907
L+ P PG PP PP G P PPP QG+ PP
Sbjct: 704 LNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRG 763
Query: 908 PXPXPGTXPP 937
P PP
Sbjct: 764 AGPMSSFPPP 773
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Frame = +2
Query: 890 PXXXEPPXPXP----GTXPPXXPXPXXXXXXPPTRPXPXXXXG 1006
P PP P P G PP P P PP P P G
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 774 RPXXLPXGSXXPFTXXTRXVTPXGGXXPPPKAGRXXXNPPXXPNRPXXXPXPIPXPPQXR 953
RP P S P + G P P PP N P P P PP
Sbjct: 532 RPAPPPVSSIPPPPPIAGLLAANGTNVPIPPP----PPPPLPQNLSGAPPPPPPPPPMLG 587
Query: 954 XXXXXXPPPG 983
PPPG
Sbjct: 588 GPPPPPPPPG 597
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 991 GXXPGGGXXXXXXRXWGGXGXGXGXXXGRFGXXGGFXXXRPALGGGXXPP 842
G GGG G G G G G G GG GGG PP
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPP 112
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
P G P P G G P N P P G A P EP P P
Sbjct: 173 PDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYP---EPAAPGP-AG 228
Query: 932 PPXXPXPXXXXXXPPT 979
PP P PT
Sbjct: 229 PPGPAGPPGPDGASPT 244
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -3
Query: 991 GXXPGGGXXXXXXRXWGGXGXGXGXXXGRFGXXGGFXXXRPALGGG 854
G GGG GG G G G G G GG R GGG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +2
Query: 845 GXXPPPQGWAXXXKPPXXXEPPXPXPGTXPPXXPXPXXXXXXPPTR-PXP 991
G P PQG + P PP P + PP P P PTR P P
Sbjct: 68 GQPPGPQGPSDLPGPSGA--PPGPPHPSGPPHRPHPHPSRRPRPTRLPRP 115
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 9.1
Identities = 21/83 (25%), Positives = 21/83 (25%), Gaps = 3/83 (3%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPP---PQGWAXXXKPPXXXEPPXPXP 922
PA PP PP K PP PQ PP P P
Sbjct: 19 PAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVP 78
Query: 923 GTXPPXXPXPXXXXXXPPTRPXP 991
PP P P P P
Sbjct: 79 APAPPLASYPQNAVPVPAPPPAP 101
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 854 PPPQGWAXXXKP---PXXXEPPXPXPGTXPPXXPXPXXXXXXPPTRP 985
PPP + P P +PP P P PP P P PP P
Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPPPPP---PPHYPPPPPHYPPPPPAP 155
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +2
Query: 752 PATXPGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQGWAXXXKPPXXXEPPXPXPGTX 931
PAT P P G+R + GG PP PP PP P P
Sbjct: 91 PAT-PNCCPKPCCRGRRPEYEEYEDEEGNPGGVPAPPNPPRTCCPPPTPAAPPPPPP--P 147
Query: 932 PPXXP 946
PP P
Sbjct: 148 PPPAP 152
Score = 25.4 bits (53), Expect(2) = 9.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 370 PPTPPPAPXXXNEC 329
PP PPPAP +C
Sbjct: 145 PPPPPPAPEAPTQC 158
Score = 21.4 bits (43), Expect(2) = 9.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 376 AXPPTPPPAP 347
A PP PPP P
Sbjct: 139 AAPPPPPPPP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,148,257
Number of Sequences: 27780
Number of extensions: 233365
Number of successful extensions: 1973
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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