Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L14
         (1248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    25   1.4  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    25   1.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   1.4  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    25   1.4  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   7.3  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 54  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPG 98



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAELEAEPG 154



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 210



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 194 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 238



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 222 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPG 266



 Score = 23.4 bits (48), Expect = 4.2
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
 Frame = +3

Query: 855 PP--PKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP  P   R    P   P  NRP   P P P  P+ R        PG
Sbjct: 24  PPTRPTRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 70


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 55  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 99



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 83  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 127



 Score = 23.4 bits (48), Expect = 4.2
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
 Frame = +3

Query: 855 PP--PKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP  P   R    P   P  NRP   P P P  P+ R        PG
Sbjct: 25  PPTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 71


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 55  PPHPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPG 99



 Score = 23.4 bits (48), Expect = 4.2
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
 Frame = +3

Query: 855 PP--PKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP  P   R    P   P  NRP   P P P  P+ R        PG
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPG 71


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 26  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 70



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 54  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 98



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 82  PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 126



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPG 154



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = +3

Query: 855 PPPKAGRXXXNPPXXP--NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           PP    R    P   P  NRP   P P P  P+ R        PG
Sbjct: 138 PPHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPG 182



 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +3

Query: 903 NRPXXXPXPIPXPPQXRXXXXXXPPPG 983
           NRP   P P P  P+ R        PG
Sbjct: 16  NRPVYIPQPRPPHPRLRREAEPEAEPG 42


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 764 PGXPPXXPPXGKRGXLHXTHPVXNSXGGXXPPPQG 868
           P  PP  P   +    +  HP  +  G   PP +G
Sbjct: 104 PTAPPIPPEIQRALEWNAAHPEEDDGGQPRPPGRG 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,265
Number of Sequences: 438
Number of extensions: 4379
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42622365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)