Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L13
         (1199 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.28 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   0.49 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   0.49 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   0.49 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   0.49 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 27.1 bits (57), Expect = 0.28
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = -2

Query: 301 LCISLMSLTLMNT--RCSFFSLNLLASIQ*LYFQSLSLNTRYYLYRVFISVNRNVNSLRP 128
           LC S   + +  T  R SFF   L + +  +Y++ L ++    L R F S  +++N    
Sbjct: 149 LCYSTYGIQVFGTMQRTSFFKTFLNSCLMDVYYEFLLISLINILIRSFKSRYKDLNQKLE 208

Query: 127 TNSDGVCERQKRSKTIM 77
           T     CE+ K  + +M
Sbjct: 209 T----ACEQSKSVEELM 221


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.49
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 222  CMEASKFKEKKEHLVFINVNDIKEMHNLHTDYIKSTI 332
            CM  +  K   E    IN+ D  EM N   D+I+ TI
Sbjct: 1119 CMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTI 1155


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.49
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 222  CMEASKFKEKKEHLVFINVNDIKEMHNLHTDYIKSTI 332
            CM  +  K   E    IN+ D  EM N   D+I+ TI
Sbjct: 1119 CMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTI 1155


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.49
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 222  CMEASKFKEKKEHLVFINVNDIKEMHNLHTDYIKSTI 332
            CM  +  K   E    IN+ D  EM N   D+I+ TI
Sbjct: 1119 CMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTI 1155


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.49
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 222  CMEASKFKEKKEHLVFINVNDIKEMHNLHTDYIKSTI 332
            CM  +  K   E    IN+ D  EM N   D+I+ TI
Sbjct: 1119 CMLCTHQKAGDEKASLINIADSLEMLNKRLDHIEKTI 1155


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 269 EHKMLLFFFKFTCFHTIIVL 210
           E K +LFFF F C    I L
Sbjct: 5   ELKRVLFFFSFCCILFFIYL 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,079
Number of Sequences: 336
Number of extensions: 3832
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34938740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)