Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L11
         (1234 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001403-1|AAH01403.1|  227|Homo sapiens nudix (nucleoside dipho...   373   e-103
AJ001810-1|CAA05026.1|  227|Homo sapiens pre-mRNA cleavage facto...   373   e-103
BX537360-1|CAD97606.1|  227|Homo sapiens hypothetical protein pr...   371   e-102
CR456919-1|CAG33200.1|  227|Homo sapiens CPSF5 protein.               370   e-102
D29642-1|BAA06125.2|  666|Homo sapiens KIAA0053 protein.               31   6.5  
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ...    31   6.5  
AC097495-2|AAY15074.1|  558|Homo sapiens unknown protein.              31   6.5  

>BC001403-1|AAH01403.1|  227|Homo sapiens nudix (nucleoside
           diphosphate linked moiety X)-type motif 21 protein.
          Length = 227

 Score =  373 bits (917), Expect = e-103
 Identities = 169/196 (86%), Positives = 183/196 (93%)
 Frame = +1

Query: 244 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 423
           LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH 
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90

Query: 424 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 603
           LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91  LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150

Query: 604 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 783
           PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210

Query: 784 IISSLSQSLCRFNFIY 831
           IISSL Q L RFNFIY
Sbjct: 211 IISSLPQLLSRFNFIY 226


>AJ001810-1|CAA05026.1|  227|Homo sapiens pre-mRNA cleavage factor I
           25 kDa subunit protein.
          Length = 227

 Score =  373 bits (917), Expect = e-103
 Identities = 169/196 (86%), Positives = 183/196 (93%)
 Frame = +1

Query: 244 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 423
           LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH 
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90

Query: 424 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 603
           LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91  LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150

Query: 604 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 783
           PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210

Query: 784 IISSLSQSLCRFNFIY 831
           IISSL Q L RFNFIY
Sbjct: 211 IISSLPQLLSRFNFIY 226


>BX537360-1|CAD97606.1|  227|Homo sapiens hypothetical protein
           protein.
          Length = 227

 Score =  371 bits (913), Expect = e-102
 Identities = 168/196 (85%), Positives = 183/196 (93%)
 Frame = +1

Query: 244 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 423
           LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH 
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90

Query: 424 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 603
           LPHVLLLQLGT FFKLPGGEL+PGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91  LPHVLLLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150

Query: 604 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 783
           PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210

Query: 784 IISSLSQSLCRFNFIY 831
           IISSL Q L RFNFIY
Sbjct: 211 IISSLPQPLSRFNFIY 226


>CR456919-1|CAG33200.1|  227|Homo sapiens CPSF5 protein.
          Length = 227

 Score =  370 bits (910), Expect = e-102
 Identities = 168/196 (85%), Positives = 182/196 (92%)
 Frame = +1

Query: 244 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 423
           LTL R+INLYPLTNYTFGTKEPL+EK +SV ARFQRMREEF KIGMRR+VEGVL+VHEH 
Sbjct: 31  LTLERTINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90

Query: 424 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWR 603
           LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE LGRQDGV Q+W+I+D IGNWWR
Sbjct: 91  LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150

Query: 604 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGP 783
           PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPLFELYDNA GYGP
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP 210

Query: 784 IISSLSQSLCRFNFIY 831
           IISSL Q L RFNFIY
Sbjct: 211 IISSLPQLLSRFNFIY 226


>D29642-1|BAA06125.2|  666|Homo sapiens KIAA0053 protein.
          Length = 666

 Score = 31.5 bits (68), Expect = 6.5
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +1

Query: 478 GELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFE 615
           G+ N GE+EID L+R++ E   R++   Q+ + E+ I N  + N++
Sbjct: 562 GKKNSGEEEIDSLQRMVQEL--RKEIETQKQMYEEQIKNLEKENYD 605


>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
           protein.
          Length = 1362

 Score = 31.5 bits (68), Expect = 6.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 580 DTIGNWWRPNFEPPQYPYIPPHITKPKEH 666
           D IG++ +P    PQ P +PPH+ +P EH
Sbjct: 818 DPIGHFTQPILHLPQ-PELPPHLPQPPEH 845


>AC097495-2|AAY15074.1|  558|Homo sapiens unknown protein.
          Length = 558

 Score = 31.5 bits (68), Expect = 6.5
 Identities = 16/46 (34%), Positives = 29/46 (63%)
 Frame = +1

Query: 478 GELNPGEDEIDGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFE 615
           G+ N GE+EID L+R++ E   R++   Q+ + E+ I N  + N++
Sbjct: 454 GKKNSGEEEIDSLQRMVQEL--RKEIETQKQMYEEQIKNLEKENYD 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,957,100
Number of Sequences: 237096
Number of extensions: 3338940
Number of successful extensions: 6712
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6712
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17504701140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)