Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L10
(1284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.33
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.33
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.58
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.76
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.76
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.76
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 1.0
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 1.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 2.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.1
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 7.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 7.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 7.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 9.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 9.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 9.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 9.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 9.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.33
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -3
Query: 598 PXXPPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXX 419
P PP G T PP PP P P P P P RF P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP--GMPPPPPPSRFGPPGMGG 332
Query: 418 XPPP 407
PPP
Sbjct: 333 MPPP 336
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = -1
Query: 570 PXXPPXXXKNPXPPPKXPXRGFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
P PP P PPP P G R P PP + P PP P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP----PPGRTPGPPGMP 314
Score = 29.1 bits (62), Expect = 7.1
Identities = 25/95 (26%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Frame = -1
Query: 675 PXKKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXK-----NPXPPPKXPXR 511
P +TP P PP P P P PP + P PPP+ P
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSR----FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 510 GFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPP 406
G P + P PP + P PPP
Sbjct: 359 G--PGMYPPPPPSRPPAPPSGHGMI----PPPPPP 387
Score = 28.7 bits (61), Expect = 9.4
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = -1
Query: 633 PPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXRXXXXXPKXKXPXPP 454
PP P P P PP PPP P G R P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG---RTPGPPGMPGMPPPP 320
Query: 453 XXAVFLXQKKXPXPPPXP 400
+ F PPP P
Sbjct: 321 PPSRFGPPGMGGMPPPPP 338
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.33
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -3
Query: 598 PXXPPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXX 419
P PP G T PP PP P P P P P RF P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP--GMPPPPPPSRFGPPGMGG 342
Query: 418 XPPP 407
PPP
Sbjct: 343 MPPP 346
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = -1
Query: 570 PXXPPXXXKNPXPPPKXPXRGFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
P PP P PPP P G R P PP + P PP P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP----PPGRTPGPPGMP 324
Score = 29.1 bits (62), Expect = 7.1
Identities = 25/95 (26%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Frame = -1
Query: 675 PXKKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXK-----NPXPPPKXPXR 511
P +TP P PP P P P PP + P PPP+ P
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSR----FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 510 GFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPP 406
G P + P PP + P PPP
Sbjct: 369 G--PGMYPPPPPSRPPAPPSGHGMI----PPPPPP 397
Score = 28.7 bits (61), Expect = 9.4
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = -1
Query: 633 PPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXRXXXXXPKXKXPXPP 454
PP P P P PP PPP P G R P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG---RTPGPPGMPGMPPPP 330
Query: 453 XXAVFLXQKKXPXPPPXP 400
+ F PPP P
Sbjct: 331 PPSRFGPPGMGGMPPPPP 348
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.58
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -3
Query: 589 PPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPP 410
PP PP P PPP P P A P P P F P PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKA-PTGVPLPVPPPPP----LFSPSMILPPP 1392
Query: 409 PXXL--KKKKN 383
P L ++KKN
Sbjct: 1393 PPPLPSEEKKN 1403
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -3
Query: 577 GKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPPP 407
GK PP P PPPK P P P P P PPP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 598 PXXPPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXX 419
P PP G PP P PPP P P+ P P R P
Sbjct: 255 PPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
Query: 418 XPP 410
PP
Sbjct: 313 PPP 315
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -3
Query: 589 PPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPP 410
PP K P P PPP P P P P P + PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 409 P 407
P
Sbjct: 299 P 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -3
Query: 577 GKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPPP 407
GK PP P PPPK P P P P P PPP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 598 PXXPPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXX 419
P PP G PP P PPP P P+ P P R P
Sbjct: 276 PPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 418 XPP 410
PP
Sbjct: 334 PPP 336
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -3
Query: 589 PPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPP 410
PP K P P PPP P P P P P + PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 409 P 407
P
Sbjct: 320 P 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.76
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -3
Query: 577 GKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPPP 407
GK PP P PPPK P P P P P PPP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 598 PXXPPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXX 419
P PP G PP P PPP P P+ P P R P
Sbjct: 261 PPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
Query: 418 XPP 410
PP
Sbjct: 319 PPP 321
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -3
Query: 589 PPXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPP 410
PP K P P PPP P P P P P + PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 409 P 407
P
Sbjct: 305 P 305
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 1.0
Identities = 24/92 (26%), Positives = 26/92 (28%)
Frame = -1
Query: 675 PXKKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXR 496
P T PP PP P K P + PP K PPP
Sbjct: 433 PKTPTRVAPP---PPPSAPPTIKFPISTGPSY--SSTTPPTTPKPAPPPPSRIPNPSPSP 487
Query: 495 XXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
K P PP + P PPP P
Sbjct: 488 QPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/60 (26%), Positives = 19/60 (31%)
Frame = -3
Query: 586 PXXGKTXXPPXXKXKPXPPPKXPXPXXXXAXKXXXPQKXXPXXPXXXRFFXPKKXXXPPP 407
P T P K P PP + P P + + K P P P PPP
Sbjct: 459 PSYSSTTPPTTPKPAPPPPSRIPNP--SPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 516
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 31.5 bits (68), Expect = 1.3
Identities = 30/130 (23%), Positives = 31/130 (23%)
Frame = -1
Query: 675 PXKKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXR 496
P K P P P K S P P P P P PK + F
Sbjct: 4 PKSKPTPKPKSEPFPKPMPKS-KPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKP 62
Query: 495 XXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP*XXXXXXXXXXXXFXPXKGXQKXPKXPX 316
P K P L K P P P P P K
Sbjct: 63 MLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKP 122
Query: 315 FPXKXXFXPP 286
FP F P
Sbjct: 123 FPKPMLFPKP 132
Score = 29.9 bits (64), Expect = 4.1
Identities = 28/120 (23%), Positives = 30/120 (25%)
Frame = -1
Query: 669 KKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXRXX 490
K P PF P K P KP P P P P F
Sbjct: 159 KSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMP 218
Query: 489 XXXPKXKXPXPPXXAVFLXQKKXPXPPPXP*XXXXXXXXXXXXFXPXKGXQKXPKXPXFP 310
PK K P +F P P P P P + PK FP
Sbjct: 219 KPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPMPFP 278
Score = 29.1 bits (62), Expect = 7.1
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = -1
Query: 675 PXKKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXR 496
P K P P P K P KP P P P PK F
Sbjct: 194 PFPKPMLFPKPMPIPKPMPFP-KPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMP--FPKP 250
Query: 495 XXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
PK K P + L K P P P P
Sbjct: 251 MPKPKPKPKPMPKPKPKLKLKPKPMPFPKPKP 282
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/90 (25%), Positives = 25/90 (27%)
Frame = -1
Query: 669 KKTPXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGFXXRXX 490
K P P P K P KP P NP P P+ +
Sbjct: 192 KPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKP 251
Query: 489 XXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
PK K P L K P P P P
Sbjct: 252 EPKPKTKLKSEPKPKPKLKPKPKPNPKPEP 281
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +1
Query: 445 GXXXGXGGFXFGAXXXXPLXKXXXXGFWGGGXVFXXXGGGXXFXXKXGGXXGKXFXXXGA 624
G G GG +G G WGG GGG GG G G
Sbjct: 54 GWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGG 113
Query: 625 XRGXXXKRGGXXG 663
G RGG G
Sbjct: 114 GGGGGGGRGGGGG 126
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 2.3
Identities = 28/99 (28%), Positives = 28/99 (28%)
Frame = +1
Query: 445 GXXXGXGGFXFGAXXXXPLXKXXXXGFWGGGXVFXXXGGGXXFXXKXGGXXGKXFXXXGA 624
G G GG G P G GGG GGG GG G G
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 98
Query: 625 XRGXXXKRGGXXGFFXXXPPPXKXXKXXXXSXGGGXPXG 741
G GG G PPP GGG G
Sbjct: 99 CGG-----GGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
Score = 28.7 bits (61), Expect = 9.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 1072 GXVXGGGGXXXFGGGGGXXXGXKKKK 1149
G GGGG GGGGG G +KK
Sbjct: 169 GCGGGGGGGCGGGGGGGCGGGCGRKK 194
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 24/97 (24%), Positives = 24/97 (24%)
Frame = +1
Query: 844 GXGGGFFXXXXGXXXXXGGGXXXXXXGXXXKXPXXXXXGGXXFXXXXXXXXXXXGKKXXF 1023
G GGG G GGG P G G
Sbjct: 84 GCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Query: 1024 FXXGGXXXXXXXXXXXGXVXGGGGXXXFGGGGGXXXG 1134
GG G GGGG GGGGG G
Sbjct: 144 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 180
Score = 22.6 bits (46), Expect(2) = 2.9
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 586 GGXXGKXFXXXGAXRGXXXKRGGXXGFFXXXPPPXKXXKXXXXSXGGGXPXG 741
GG G G G GG G PPP GGG G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 75
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = -1
Query: 540 PXPPPKXPXRGFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
P PPP P + F P PP + P PPP P
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = -1
Query: 540 PXPPPKXPXRGFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
P PPP P + F P PP + P PPP P
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical protein
T19A5.3a protein.
Length = 715
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 1072 GXVXGGGGXXXFGGGGGXXXG 1134
G GGGG FGGGGG G
Sbjct: 478 GSFGGGGGGGGFGGGGGGFGG 498
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 445 GXXXGXGGFXFGAXXXXPLXKXXXXGFWGGGXVFXXXGGGXXFXXKXGGXXGKXFXXXGA 624
G G GG+ G G+ GGG GGG GG G G
Sbjct: 139 GMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGG 198
Query: 625 XRGXXXKRGGXXG 663
G GG G
Sbjct: 199 GMGGGGYGGGGMG 211
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -1
Query: 561 PPXXXKNPXPPPKXPXRGFXXRXXXXXPKXKXPXPPXXAVFLXQKKXPXPPPXP 400
PP K PPP K P PP + P PPP P
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 589 PPXXGKTXXPPXXKXKPXPPPKXPXP 512
PP +T PP P PPP P P
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPP 150
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -1
Query: 660 PXXPPFXXXPPXXPXXXKXFSXXXPXFXXKPXXPPXXXKNPXPPPKXPXRGF 505
P P PP P + P P PP P PP P GF
Sbjct: 686 PGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGF 737
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 652 PPFXXXXPFXPXFXKXFFPXXPPXXGKTXXPPXXKXKPXPPP 527
PP P P P PP G PP P PPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 9.4
Identities = 25/121 (20%), Positives = 29/121 (23%), Gaps = 3/121 (2%)
Frame = -1
Query: 879 PXXXXKKPPPXPPXXXXXXFSXXXPXXXXKXXXGXFPGXKXXXXXXPXXXSPPPTXXXXF 700
P +PPP P P G PPP
Sbjct: 74 PYQHPHQPPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRA 133
Query: 699 XXFXRGXXPXKKTPXXPPFXXXPPXXPXXXKXFSXXXPXF---XXKPXXPPXXXKNPXPP 529
P + P PP PP P P +P PP +P PP
Sbjct: 134 GGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
Query: 528 P 526
P
Sbjct: 194 P 194
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -3
Query: 676 PXXKNPXXPPFXXXXPFX---PXFXKXFFPXXPPXXGKTXXPPXXKXKPXPPPKXPXP 512
P +P PP P+ P F FFP PP PP + PPP P P
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFG--FFPP-PPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -3
Query: 676 PXXKNPXXPPFXXXXPFX---PXFXKXFFPXXPPXXGKTXXPPXXKXKPXPPPKXPXP 512
P +P PP P+ P F FFP PP PP + PPP P P
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFG--FFPP-PPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 662 PXXPPLXXFXPLXAPFXKXFFPXXPPXFXXNXXPPPXXXKTXPPPQXP 519
P PP F P AP PP F PP PPP P
Sbjct: 121 PACPP-PCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPPPAP 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,547,797
Number of Sequences: 27780
Number of extensions: 206197
Number of successful extensions: 1840
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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