Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L09
         (1235 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1430 - 37309737-37309946,37310049-37310100,37310348-373104...    73   5e-13
12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503...    32   1.1  
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486...    32   1.1  
07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534     29   10.0 
05_03_0608 + 16153992-16154960,16158959-16159168,16159252-161595...    29   10.0 
01_06_1824 - 40146757-40147648,40150119-40150441                       29   10.0 

>01_06_1430 -
           37309737-37309946,37310049-37310100,37310348-37310427,
           37310538-37310606,37310710-37310843,37311173-37311332,
           37311483-37311554,37312113-37312246,37312386-37312521,
           37313273-37313416
          Length = 396

 Score = 72.9 bits (171), Expect = 5e-13
 Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
 Frame = +1

Query: 223 VKFTVHTKTTLPEFQKSEFIVVRQHEEFVWLHDRYEENEEYAGYIIPPAPPRPDFDASRE 402
           + + V TKT LP+F+  E IV+R++ +F WLHDR    E+Y G  IPP P +   +  R 
Sbjct: 41  ISYRVITKTNLPDFEGQEKIVIRRYSDFEWLHDRLA--EKYKGIFIPPLPEKNAVEKFR- 97

Query: 403 KLQRLGEGEGALTREEFLKMKEELEDEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRV 582
                         +EF++++ +  D              +F+ R+A+HP  ++   L++
Sbjct: 98  ------------FSKEFIELRRQALD--------------LFVNRIASHPELKQSGDLKI 131

Query: 583 FLEYEQDLCAKPRG-------KMDLIGGLVRSMTTTTDEIYLG--ATVRDVNDFFEQETS 735
           FL+ +++   + R        K      + + + +   ++ LG    V + +  +E+  +
Sbjct: 132 FLQADEEKMDRERSYETGIFKKPSDFLQMFKDVQSKVSDVVLGKEKPVEESSPEYEKLKN 191

Query: 736 FLQEYYSHLKEAVAKVDRMTSKHKEVADAHIKLSSCITXLATREXXPMERFLTK 897
           ++ E  +HL EA  +  R+  +H+E+  +       I  L   E   +E+  ++
Sbjct: 192 YIFELENHLAEAQKQAFRLVKRHRELGQSLADFGKAIKLLGACEGDSLEKVFSE 245


>12_01_0611 -
           5034481-5034709,5034863-5035020,5035231-5035475,
           5036686-5036983,5037644-5038482,5039763-5039823
          Length = 609

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 19/78 (24%), Positives = 36/78 (46%)
 Frame = +1

Query: 319 DRYEENEEYAGYIIPPAPPRPDFDASREKLQRLGEGEGALTREEFLKMKEELEDEYLATF 498
           DR +  E+   +I        +F+A R+KL +L E +    ++E+L  + ELE E     
Sbjct: 530 DRRQRKEKIQNFIDCQVKDVEEFEAERDKLIKLHEEKKVKLKKEYLAKEFELEKELDTAL 589

Query: 499 KKTVAMHEVFLQRLAAHP 552
              +  H+  + + +  P
Sbjct: 590 TSLMDKHKPDIFKSSTSP 607


>04_01_0097 -
           998766-999383,999479-999861,1000021-1000398,
           1000486-1000711,1000799-1001323,1003032-1003164,
           1004353-1004435,1004645-1005349,1005483-1005556,
           1006290-1006392,1006485-1006727
          Length = 1156

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = +1

Query: 97  VADPAPATMDTKVEKKKPNENVSLADNSLLVDISDALSEKEKVKFTVHTKTTLPEFQKSE 276
           +A  A    + K + K+   +  LA+N++   I      + ++K   H   TL   ++ E
Sbjct: 129 IAALAAENYELKEKLKEVERHAELAENTVDHHIHSPRDLRAELKKLKHAYKTLSSEKEKE 188

Query: 277 FIVVRQHEEFVWLHDRYEENE 339
              +R   +FVW   R  EN+
Sbjct: 189 VSALRAENDFVWNQLRTMEND 209


>07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534
          Length = 889

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 509 WRCT-KYSSSAWLLIRSSAGTLISGYSWSTNRI 604
           WR   K    AWL   S AG +  G+SW+ N++
Sbjct: 106 WRVRHKNRDGAWLWTMSMAGDVWFGFSWALNQL 138


>05_03_0608 +
           16153992-16154960,16158959-16159168,16159252-16159512,
           16160153-16160197,16160324-16160410,16160679-16160774
          Length = 555

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +1

Query: 478 DEYLATFKKTVAMHEVFLQRLAAHPVFRRDSHLRVFLEYE 597
           DE++A  ++  A+ E +L RLA HP       LRVFL+ E
Sbjct: 189 DEFVA--QRRAAL-ERYLWRLAEHPAIGPSDELRVFLQAE 225


>01_06_1824 - 40146757-40147648,40150119-40150441
          Length = 404

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +2

Query: 509 WRCTKYSSSAWLLIRSSAGTLISGY--SWSTNRISVPSQEARWTSLVDWFGQ*QQPLMRY 682
           W+C  Y ++AW LI  SAG  + G   + ST   ++P      +SLV+  G  + P  + 
Sbjct: 257 WKCD-YVAAAWALINLSAGQFVIGADDNESTPISAIPVPPIS-SSLVEEIGPGRSPRAKK 314

Query: 683 TSGR 694
            S R
Sbjct: 315 FSSR 318


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,571,662
Number of Sequences: 37544
Number of extensions: 499740
Number of successful extensions: 1646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)