Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L09
         (1235 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   2.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   2.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   2.4  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   7.2  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 383 ISMPPARSYNDWVRGKEP 436
           IS PP   +NDW    EP
Sbjct: 167 ISSPPLAGWNDWPEELEP 184


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 383 ISMPPARSYNDWVRGKEP 436
           IS PP   +NDW    EP
Sbjct: 167 ISSPPLAGWNDWPEELEP 184


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 383 ISMPPARSYNDWVRGKEP 436
           IS PP   +NDW    EP
Sbjct: 167 ISSPPLAGWNDWPEELEP 184


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +2

Query: 314 YMTVMKRMRNMLVI*SLQHLLVLISMPPARSYNDWVRG 427
           Y  +  RM+  +   +   + + I  PP + Y+ W+ G
Sbjct: 81  YPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGG 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,609
Number of Sequences: 438
Number of extensions: 5135
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42142113
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)