Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L08
(1191 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62318 Cluster: Small nuclear ribonucleoprotein Sm D3; ... 129 1e-28
UniRef50_Q17348 Cluster: Small nuclear ribonucleoprotein Sm D3; ... 92 2e-17
UniRef50_A7PSI3 Cluster: Chromosome chr6 scaffold_28, whole geno... 89 2e-16
UniRef50_Q5KLG7 Cluster: Pre-mRNA splicing factor, putative; n=1... 89 2e-16
UniRef50_Q5CSL0 Cluster: Small nucealr riboprotein SMD3, SM doma... 81 7e-14
UniRef50_Q9LMW6 Cluster: F5M15.9; n=4; Arabidopsis thaliana|Rep:... 69 4e-13
UniRef50_UPI0000D8A096 Cluster: small nuclear ribonucleoprotein ... 77 1e-12
UniRef50_A0CT01 Cluster: Chromosome undetermined scaffold_266, w... 75 3e-12
UniRef50_A0C2U8 Cluster: Chromosome undetermined scaffold_145, w... 75 3e-12
UniRef50_A1CHW9 Cluster: Small nuclear ribonucleoprotein SmD3, p... 73 1e-11
UniRef50_P43321 Cluster: Small nuclear ribonucleoprotein Sm D3; ... 73 1e-11
UniRef50_UPI0000498C5A Cluster: small nuclear ribonucleoprotein;... 69 3e-10
UniRef50_Q4Y7X8 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 63 2e-08
UniRef50_A2DK14 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 57 1e-06
UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 53 1e-05
UniRef50_Q8SW39 Cluster: Similarity to SMALL NUCLEAR RIBONUCLEOP... 50 9e-05
UniRef50_Q3LW05 Cluster: Spliceosomal snRNA-associated Sm core p... 48 5e-04
UniRef50_Q0UDD7 Cluster: Putative uncharacterized protein; n=1; ... 44 0.008
UniRef50_Q7RIW4 Cluster: Putative uncharacterized protein PY0350... 42 0.031
UniRef50_Q4Q2F6 Cluster: Small nuclear ribonucleoprotein, putati... 41 0.055
UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole gen... 40 0.13
UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3; ... 38 0.39
UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.6
UniRef50_Q254S4 Cluster: Adherence factor; n=2; Chlamydophila|Re... 34 6.3
>UniRef50_P62318 Cluster: Small nuclear ribonucleoprotein Sm D3;
n=40; Fungi/Metazoa group|Rep: Small nuclear
ribonucleoprotein Sm D3 - Homo sapiens (Human)
Length = 126
Score = 129 bits (312), Expect = 1e-28
Identities = 67/103 (65%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MS+GVP+ VLH A GH+V C TN G V G LIEAE CQM +TVTY GRVAQLE
Sbjct: 1 MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFKXQGNK---PTAGRGKSAIL 477
VYIRGSK FLILPDMLK APM K NK AGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAIL 103
>UniRef50_Q17348 Cluster: Small nuclear ribonucleoprotein Sm D3;
n=3; Eukaryota|Rep: Small nuclear ribonucleoprotein Sm
D3 - Caenorhabditis elegans
Length = 136
Score = 92.3 bits (219), Expect = 2e-17
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = +1
Query: 181 SLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHV 360
S+GVP+ +LH A GH+V T G V G L EAE CQ+ VT+ GR QL++V
Sbjct: 3 SVGVPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNV 62
Query: 361 YIRGSKXXFLILPDMLKXAPMFKXQG 438
+IRG+K F+ILPDMLK APMFK G
Sbjct: 63 FIRGNKIRFMILPDMLKNAPMFKNIG 88
>UniRef50_A7PSI3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=6; Eukaryota|Rep: Chromosome chr6
scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 199
Score = 89.0 bits (211), Expect = 2e-16
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +1
Query: 172 VNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQL 351
++ SLG+P+ +LH A GHVV G + G +IE + CQ+ +T T G+V+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVIVELKSGELYRGSMIECKDNWNCQLENITFTVKDGKVSQL 60
Query: 352 EHVYIRGSKXXFLILPDMLKXAPMFK 429
EHV+IRG K F+++PDM K APMFK
Sbjct: 61 EHVFIRGIKVRFMVIPDMRKNAPMFK 86
>UniRef50_Q5KLG7 Cluster: Pre-mRNA splicing factor, putative; n=12;
Eukaryota|Rep: Pre-mRNA splicing factor, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 124
Score = 89.0 bits (211), Expect = 2e-16
Identities = 44/97 (45%), Positives = 58/97 (59%)
Frame = +1
Query: 181 SLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHV 360
+LGVP+ +LH + GH++ G + G L+EAE + +TVT GRV+QLE V
Sbjct: 3 NLGVPVKLLHESLGHIITVELKTGEMYRGKLMEAEDTLNIALREITVTARDGRVSQLEQV 62
Query: 361 YIRGSKXXFLILPDMLKXAPMFKXQGNKPTAGRGKSA 471
YIRGS F+I+PD+L APMFK G GRG A
Sbjct: 63 YIRGSMIRFIIVPDLLAQAPMFKRIGPNAMRGRGIGA 99
>UniRef50_Q5CSL0 Cluster: Small nucealr riboprotein SMD3, SM domain;
n=5; Apicomplexa|Rep: Small nucealr riboprotein SMD3, SM
domain - Cryptosporidium parvum Iowa II
Length = 143
Score = 80.6 bits (190), Expect = 7e-14
Identities = 37/90 (41%), Positives = 49/90 (54%)
Frame = +1
Query: 172 VNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQL 351
+NM++G+PL +L+ GH+V G + G L E C + V T G+ L
Sbjct: 21 INMTIGIPLKLLYEGLGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDGKPVSL 80
Query: 352 EHVYIRGSKXXFLILPDMLKXAPMFKXQGN 441
E Y+RGS+ F ILPDMLK APMFK N
Sbjct: 81 EQCYLRGSQIRFCILPDMLKNAPMFKLAAN 110
>UniRef50_Q9LMW6 Cluster: F5M15.9; n=4; Arabidopsis thaliana|Rep:
F5M15.9 - Arabidopsis thaliana (Mouse-ear cress)
Length = 207
Score = 69.3 bits (162), Expect(2) = 4e-13
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +1
Query: 172 VNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQL 351
++ SLG+P+ +LH A GH+V G + G +IE E CQ+ +T T G+V+QL
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQL 60
Query: 352 EHVYIRGSK 378
EHV+IRGSK
Sbjct: 61 EHVFIRGSK 69
Score = 29.1 bits (62), Expect(2) = 4e-13
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 385 FLILPDMLKXAPMFK 429
F+++PD+LK APMFK
Sbjct: 103 FMVIPDILKHAPMFK 117
>UniRef50_UPI0000D8A096 Cluster: small nuclear ribonucleoprotein
(snrnp),putative; n=1; Eimeria tenella|Rep: small
nuclear ribonucleoprotein (snrnp),putative - Eimeria
tenella
Length = 125
Score = 76.6 bits (180), Expect = 1e-12
Identities = 37/83 (44%), Positives = 49/83 (59%)
Frame = +1
Query: 181 SLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHV 360
S+G+P+ +LH GH + T G + G L AE + VTVT+ G+V LE V
Sbjct: 6 SVGIPVKLLHEGLGHTITVETKTGSLYRGTLENAEDNMNMLIQGVTVTHKDGKVLSLEQV 65
Query: 361 YIRGSKXXFLILPDMLKXAPMFK 429
YIRGS+ +I PDML+ APMFK
Sbjct: 66 YIRGSQVQMVIFPDMLRHAPMFK 88
>UniRef50_A0CT01 Cluster: Chromosome undetermined scaffold_266,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_266,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 363
Score = 75.4 bits (177), Expect = 3e-12
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MSLGVPL ++H A H+V G + +G + EAE ++ V + GR LE
Sbjct: 1 MSLGVPLKIMHEAVHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDGRPMSLEQ 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFK 429
VY+RGS+ F+++PD+ K APMFK
Sbjct: 61 VYLRGSQIRFVVIPDVFKYAPMFK 84
>UniRef50_A0C2U8 Cluster: Chromosome undetermined scaffold_145,
whole genome shotgun sequence; n=5; Eukaryota|Rep:
Chromosome undetermined scaffold_145, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 75.4 bits (177), Expect = 3e-12
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MSLGVPL ++H A H+V G + +G + EAE ++ V + GR LE
Sbjct: 1 MSLGVPLKIMHEAVHHIVTVELKTGEMFTGYMAEAEDTMNVRLDEVQMVTRDGRPMSLEQ 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFK 429
VY+RGS+ F+++PD+ K APMFK
Sbjct: 61 VYLRGSQIRFVVIPDVFKYAPMFK 84
>UniRef50_A1CHW9 Cluster: Small nuclear ribonucleoprotein SmD3,
putative; n=12; Eukaryota|Rep: Small nuclear
ribonucleoprotein SmD3, putative - Aspergillus clavatus
Length = 136
Score = 72.9 bits (171), Expect = 1e-11
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +1
Query: 181 SLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHV 360
++G+P+ +L+ A GHVV G V G L+EAE Q+ +TVT GRV+ L+ V
Sbjct: 7 TIGIPIKLLNEAQGHVVTLEITSGVVYRGKLLEAEDNMNVQLKDITVTARDGRVSHLDQV 66
Query: 361 YIRGSKXXFLILPDMLK 411
YIRGS F I+PDML+
Sbjct: 67 YIRGSHVKFFIVPDMLR 83
>UniRef50_P43321 Cluster: Small nuclear ribonucleoprotein Sm D3;
n=11; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein Sm D3 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 101
Score = 72.9 bits (171), Expect = 1e-11
Identities = 30/87 (34%), Positives = 51/87 (58%)
Frame = +1
Query: 187 GVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHVYI 366
G+P+ +L+ A GH+V G G L+E+E Q+ V T G V ++ +++
Sbjct: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64
Query: 367 RGSKXXFLILPDMLKXAPMFKXQGNKP 447
RGS+ F+++PD+LK AP+FK ++P
Sbjct: 65 RGSQIKFIVVPDLLKNAPLFKKNSSRP 91
>UniRef50_UPI0000498C5A Cluster: small nuclear ribonucleoprotein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein - Entamoeba histolytica HM-1:IMSS
Length = 111
Score = 68.5 bits (160), Expect = 3e-10
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
M++G PL + H + G +V G G ++E E CQ+ VT+T G ++ E+
Sbjct: 1 MNIGAPLKIFHESKGTIVTIEVKTGETYRGRMVETEDNMNCQLRDVTITAKDGSQSRTEY 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFK 429
++IRG++ F++LP+M K +P K
Sbjct: 61 IFIRGNQVRFVVLPEMFKNSPCLK 84
>UniRef50_Q4Y7X8 Cluster: Small nuclear ribonucleoprotein (SnRNP),
putative; n=4; Plasmodium|Rep: Small nuclear
ribonucleoprotein (SnRNP), putative - Plasmodium
chabaudi
Length = 129
Score = 62.9 bits (146), Expect = 2e-08
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLI-------------EAEXXXXCQMXLVT 318
MS+G P+ ++H GH + T G + G L+ AE C + VT
Sbjct: 1 MSVGTPIKLIHEGIGHTISVETKSGILYRGTLVCSFMLILYFLKDLFAEDNMNCLLSNVT 60
Query: 319 VTYXXGRVAQLEHVYIRGSKXXFLILPDMLKXAPMFKXQGNK 444
V G+ LE VYIRG F+I PDML+ AP+FK +K
Sbjct: 61 VVKQDGKQVLLEQVYIRGGSVSFMIFPDMLRYAPIFKINKSK 102
>UniRef50_A2DK14 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 119
Score = 56.8 bits (131), Expect = 1e-06
Identities = 30/77 (38%), Positives = 39/77 (50%)
Frame = +1
Query: 196 LXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHVYIRGS 375
+ +LH A G VV T G + G L +E ++ VT T G + + VYIRGS
Sbjct: 12 IAILHEADGFVVTIETKQGEMYRGTLFGSEDTMNVELHDVTYTNSKGVDSHKDKVYIRGS 71
Query: 376 KXXFLILPDMLKXAPMF 426
F +LPDM APMF
Sbjct: 72 NIVFFVLPDMFANAPMF 88
>UniRef50_A2E8V8 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 112
Score = 53.2 bits (122), Expect = 1e-05
Identities = 29/84 (34%), Positives = 40/84 (47%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MS G+P+ +LH A VV N G G L E C + V T G+ + +
Sbjct: 1 MSNGIPIKLLHEATNFVVEIHLNTGDSYRGTLKYVEDNMNCWLTNVVHTQKDGQQIKFDK 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFK 429
Y+RGS + LP+ML A +FK
Sbjct: 61 TYVRGSNILYFDLPEMLLNARLFK 84
>UniRef50_Q8SW39 Cluster: Similarity to SMALL NUCLEAR
RIBONUCLEOPROTEIN D3; n=1; Encephalitozoon cuniculi|Rep:
Similarity to SMALL NUCLEAR RIBONUCLEOPROTEIN D3 -
Encephalitozoon cuniculi
Length = 87
Score = 50.4 bits (115), Expect = 9e-05
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
M++ VPL +LH + G +V T+ G + G + E + + V VT +++ E
Sbjct: 1 MAVTVPLKLLHESQGFIVTVETSSGDMYRGRVREVDDYMNLVLDDVVVTSNNSSLSRKE- 59
Query: 358 VYIRGSKXXFLILPDMLKXAPMF 426
V IRGS F +LP LK AP F
Sbjct: 60 VLIRGSSIRFFVLPPALKFAPFF 82
>UniRef50_Q3LW05 Cluster: Spliceosomal snRNA-associated Sm core
protein required for pre-mRNA splicing; n=1;
Bigelowiella natans|Rep: Spliceosomal snRNA-associated
Sm core protein required for pre-mRNA splicing -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 141
Score = 48.0 bits (109), Expect = 5e-04
Identities = 21/87 (24%), Positives = 46/87 (52%)
Frame = +1
Query: 166 SXVNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVA 345
S + ++G+PL ++H A H + G + G L+ +E + V + + +
Sbjct: 2 SSTSKNVGIPLKLIHQAEKHQISVKLKDGKLLIGELMNSEDNWNLCLKKVIIKEKENKSS 61
Query: 346 QLEHVYIRGSKXXFLILPDMLKXAPMF 426
+ ++RG++ F+I+P++LK +P+F
Sbjct: 62 KSMLYFVRGNQITFIIIPEILKYSPLF 88
>UniRef50_Q0UDD7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 80
Score = 44.0 bits (99), Expect = 0.008
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 301 QMXLVTVTYXXGRVAQLEHVYIRGSKXXFLILPDMLK 411
Q+ +TVT GRV+ LE VYIRGS + I+PDML+
Sbjct: 4 QLKDITVTARDGRVSHLEQVYIRGSHVRYFIVPDMLR 40
>UniRef50_Q7RIW4 Cluster: Putative uncharacterized protein PY03502;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03502 - Plasmodium yoelii yoelii
Length = 215
Score = 41.9 bits (94), Expect = 0.031
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLE 354
MS+G P+ ++H GH + T G + G L+ AE C + VTV G+ LE
Sbjct: 1 MSVGTPIKLIHEGIGHTISVETKSGILYRGILLFAEDNMNCLLSNVTVVKQDGKQILLE 59
Score = 40.7 bits (91), Expect = 0.073
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 349 LEHVYIRGSKXXFLILPDMLKXAPMFKXQGNK 444
L+ VYIRG F+I PDML+ AP+FK +K
Sbjct: 114 LQQVYIRGGSVSFMIFPDMLRYAPIFKVNKSK 145
>UniRef50_Q4Q2F6 Cluster: Small nuclear ribonucleoprotein, putative;
n=6; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 113
Score = 41.1 bits (92), Expect = 0.055
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
M+ +P+ VL A V G V G + E + + T T G+ +++
Sbjct: 1 MAESIPIKVLFDALHLKVSIEVATGEVYHGTVEELQNNMNVLLKDATKTARGGKETKMDS 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFKXQGN-----KPTAGRGK 465
V++RGS F LPD L+ +P G K T G GK
Sbjct: 61 VFVRGSNIVFFQLPDALQTSPALLRAGEVVSKAKDTRGDGK 101
>UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 281
Score = 39.9 bits (89), Expect = 0.13
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +1
Query: 145 SRPCFLHSXVNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVT 324
SR L S +N G+PL +L A GH + G +G L+ + + V T
Sbjct: 76 SRELLLDSGIN---GLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICT 132
Query: 325 YXXG-RVAQLEHVYIRGSKXXFLILPDML--KXAPMFKXQGNK--PTAGRGK 465
G R ++ YIRG+ +L +PD + K K + ++ P GRG+
Sbjct: 133 SKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKNRADRKPPGVGRGR 184
>UniRef50_A6S1F2 Cluster: Putative uncharacterized protein; n=3;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 690
Score = 38.3 bits (85), Expect = 0.39
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 190 VPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXG-RVAQLEHVYI 366
+PL +L AA GH + G +G L+ + + V T G + +L +Y+
Sbjct: 3 LPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEIYV 62
Query: 367 RGSKXXFLILPDMLKXAPMFKXQGNKPT-AGRG 462
+G+ +L +PD + + QG + GRG
Sbjct: 63 KGNNIKYLRMPDEIIDLVKDQQQGQQSNYRGRG 95
>UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 187
Score = 36.3 bits (80), Expect = 1.6
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1
Query: 202 VLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXG-RVAQLEHVYIRGSK 378
+L AA GH + G +G L+ + + V T G + +L +Y+RGS
Sbjct: 66 LLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKFMRLPEIYVRGST 125
Query: 379 XXFLILPDMLKXAPMFKXQGNKPTAGRG 462
+L +PD + + K Q K A RG
Sbjct: 126 IKYLRVPD--EIVDVVKDQQVKDQANRG 151
>UniRef50_Q254S4 Cluster: Adherence factor; n=2; Chlamydophila|Rep:
Adherence factor - Chlamydophila felis (strain Fe/C-56)
Length = 3298
Score = 34.3 bits (75), Expect = 6.3
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 434 KGINLLQDEGRVRYCEPKLLVEDEQVEEVGATVEAGK 544
KG++ + DE R+ Y E +L + +++V++ T+E K
Sbjct: 435 KGVDRISDENRIEYLEKELKLSEDEVKQYKETIETNK 471
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,951,168
Number of Sequences: 1657284
Number of extensions: 13806594
Number of successful extensions: 27726
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27714
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 119538648642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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