Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L08
         (1191 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0318 + 7417361-7417519,7417638-7417690,7417770-7417836,741...    96   6e-20
02_01_0022 - 135655-135717,137426-137482,137559-137678,137762-13...    96   6e-20
04_04_0192 - 23471346-23471572,23473004-23473195,23474342-234744...    36   0.083
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856...    32   0.77 
02_04_0403 - 22622014-22622075,22622159-22622350,22624834-226249...    30   4.1  

>03_02_0318 +
           7417361-7417519,7417638-7417690,7417770-7417836,
           7417925-7417981,7420005-7420067
          Length = 132

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = +1

Query: 172 VNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQL 351
           ++ SLG+P+ +LH A GHVV      G V  G ++E E    CQ+  +T T   G+V+QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQL 60

Query: 352 EHVYIRGSKXXFLILPDMLKXAPMFK 429
           EHV+IRGS+  F+I+PDMLK APMFK
Sbjct: 61  EHVFIRGSRVRFMIIPDMLKNAPMFK 86


>02_01_0022 -
           135655-135717,137426-137482,137559-137678,137762-137920
          Length = 132

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = +1

Query: 172 VNMSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQL 351
           ++ SLG+P+ +LH A GHVV      G V  G ++E E    CQ+  +T T   G+V+QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLDNITFTAKDGKVSQL 60

Query: 352 EHVYIRGSKXXFLILPDMLKXAPMFK 429
           EHV+IRGS+  F+I+PDMLK APMFK
Sbjct: 61  EHVFIRGSRVRFMIIPDMLKNAPMFK 86


>04_04_0192 -
           23471346-23471572,23473004-23473195,23474342-23474418,
           23475810-23475850,23475928-23475974,23476108-23476194,
           23476807-23477011,23477747-23477866
          Length = 331

 Score = 35.5 bits (78), Expect = 0.083
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
 Frame = +1

Query: 250 GXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHVYIRGSKXXFLILPDMLKXAPMF- 426
           G V  G +   +      +  V +T        L+H+ +RG+   + ILPD L    +  
Sbjct: 184 GTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLV 243

Query: 427 ----KXQGNKPTAGRGKSAI 474
               + +  KPTAGR   A+
Sbjct: 244 EDTPRVKAKKPTAGRAAWAV 263


>01_01_1089 -
           8560008-8560220,8560456-8560977,8561095-8561283,
           8561377-8561642,8561967-8562111,8562411-8562530,
           8562611-8562930,8564161-8564341,8564434-8564580,
           8565186-8565497,8566303-8566450,8566592-8566765,
           8567385-8567446,8567499-8567571,8567628-8567683,
           8568370-8568645,8569541-8569588,8569870-8569991,
           8570258-8570413,8571037-8571079,8572624-8572701,
           8572972-8573070,8573168-8573209,8573302-8573304
          Length = 1264

 Score = 32.3 bits (70), Expect = 0.77
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 190 VPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXG-RVAQLEHVYI 366
           +PL +L  A GH +      G   +G L+  +      +  V  T   G +  ++   YI
Sbjct: 2   LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECYI 61

Query: 367 RGSKXXFLILPD 402
           RG+   +L +PD
Sbjct: 62  RGNTIKYLRVPD 73


>02_04_0403 -
           22622014-22622075,22622159-22622350,22624834-22624910,
           22625026-22625039
          Length = 114

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = +1

Query: 250 GXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEHVYIRGSKXXFLILPDMLKXAPMF- 426
           G    G +   +      +  V +T         +H+ +RG+   + ILPD L    +  
Sbjct: 22  GTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSVRGNNIRYYILPDSLNLETLLV 81

Query: 427 ----KXQGNKPTAGR 459
               + +  KPTAG+
Sbjct: 82  EDTPRVKAKKPTAGK 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,553,491
Number of Sequences: 37544
Number of extensions: 371005
Number of successful extensions: 764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)