Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_L08
(1191 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p pro... 127 3e-29
AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclea... 127 3e-29
AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA... 127 3e-29
BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p pro... 32 1.3
AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-P... 32 1.3
BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p pro... 30 5.4
AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE... 29 9.5
AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB... 29 9.5
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD... 29 9.5
>AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p
protein.
Length = 151
Score = 127 bits (306), Expect = 3e-29
Identities = 65/103 (63%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MS+GVP+ VLH A GH++ C T G V G LIEAE CQM +TVTY GR A LE+
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLEN 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFKXQGNK---PTAGRGKSAIL 477
VYIRGSK FLILPDMLK APMFK Q K TAGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAIL 103
>AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclear
ribonucleoproteinSm D3 protein.
Length = 151
Score = 127 bits (306), Expect = 3e-29
Identities = 65/103 (63%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MS+GVP+ VLH A GH++ C T G V G LIEAE CQM +TVTY GR A LE+
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLEN 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFKXQGNK---PTAGRGKSAIL 477
VYIRGSK FLILPDMLK APMFK Q K TAGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAIL 103
>AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA
protein.
Length = 151
Score = 127 bits (306), Expect = 3e-29
Identities = 65/103 (63%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +1
Query: 178 MSLGVPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXGRVAQLEH 357
MS+GVP+ VLH A GH++ C T G V G LIEAE CQM +TVTY GR A LE+
Sbjct: 1 MSIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLEN 60
Query: 358 VYIRGSKXXFLILPDMLKXAPMFKXQGNK---PTAGRGKSAIL 477
VYIRGSK FLILPDMLK APMFK Q K TAGRGK+AIL
Sbjct: 61 VYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAGRGKAAIL 103
>BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p
protein.
Length = 154
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 190 VPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXG-RVAQLEHVYI 366
+PL +L A H + G +G L+ + + V T G R ++ YI
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYI 61
Query: 367 RGSKXXFLILPD 402
RGS +L +PD
Sbjct: 62 RGSTIKYLRIPD 73
>AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-PA,
isoform A protein.
Length = 154
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 190 VPLXVLHAAXGHVVPCATNPGXVXSGXLIEAEXXXXCQMXLVTVTYXXG-RVAQLEHVYI 366
+PL +L A H + G +G L+ + + V T G R ++ YI
Sbjct: 2 LPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYI 61
Query: 367 RGSKXXFLILPD 402
RGS +L +PD
Sbjct: 62 RGSTIKYLRIPD 73
>BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p
protein.
Length = 124
Score = 30.3 bits (65), Expect = 5.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 486 SCWSRTSRWKRWGPPWRLARWVR 554
S W R RW+RW WR +RW R
Sbjct: 26 SWWIRRIRWRRW---WRWSRWRR 45
>AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE,
isoform E protein.
Length = 2832
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 244 LLHKALHDLPPREGLXEAHRETC*RLSEENTDEKGQECR 128
LLHK + LP E + ++ T LSEE D G CR
Sbjct: 1816 LLHKLIALLPLAEQMSSGNQHTQFLLSEEGKDPYGPACR 1854
>AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB,
isoform B protein.
Length = 3703
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 244 LLHKALHDLPPREGLXEAHRETC*RLSEENTDEKGQECR 128
LLHK + LP E + ++ T LSEE D G CR
Sbjct: 1607 LLHKLIALLPLAEQMSSGNQHTQFLLSEEGKDPYGPACR 1645
>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
isoform D protein.
Length = 3912
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 244 LLHKALHDLPPREGLXEAHRETC*RLSEENTDEKGQECR 128
LLHK + LP E + ++ T LSEE D G CR
Sbjct: 1816 LLHKLIALLPLAEQMSSGNQHTQFLLSEEGKDPYGPACR 1854
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,861,819
Number of Sequences: 53049
Number of extensions: 650595
Number of successful extensions: 1092
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6332107740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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