Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_L04
         (1197 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    46   7e-05
AF101310-1|AAC69216.2|  765|Caenorhabditis elegans Hypothetical ...    44   2e-04
AC084156-2|AAK68490.2|  243|Caenorhabditis elegans Hypothetical ...    44   2e-04
Z81016-1|CAB02666.1|  219|Caenorhabditis elegans Hypothetical pr...    31   2.1  

>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
 Frame = +3

Query: 423 VLTNDLKQVTFHPF-YSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGTDILIGVGSNKVN 599
           +   D  + TFH    +  T  +RG       +H  W+I+      GT  ++GV +    
Sbjct: 125 IFVKDEDKFTFHRHPVAQSTDCIRGKMGYSRGFHV-WQIEWPERQRGTHAVVGVATKNAP 183

Query: 600 ISDPQFTFTSLIGQDEESYGLSYT-GAVRHNSKVTRD-SVGFCRG-TIIGVR------VD 752
           +    +T  +LIG  +ESYG   T     H+SK T      F     +  V       +D
Sbjct: 184 LHAAGYT--ALIGTTDESYGWDITRRECHHDSKHTMTWRYPFSNSRDVYNVPDKFYCILD 241

Query: 753 LWNGTLEFYVNREPQGIAFYNLRRHQVLFPMISSTAAQSSMKLIYAASWQASLL 914
           +  G + F  + E  G+AF NL + + L+P++++      + + Y  S +  L+
Sbjct: 242 MDEGYMAFATDDEFLGVAFRNL-KGKTLYPIVAAVWGHCEISMRYLGSLERELI 294


>AF101310-1|AAC69216.2|  765|Caenorhabditis elegans Hypothetical
           protein C39F7.2 protein.
          Length = 765

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
 Frame = +3

Query: 522 YYWEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGA----VRHN 689
           +YWE+ +      +DI+IGV    VN +        ++G+D   + +   G     + + 
Sbjct: 637 HYWEVTIDRHDGNSDIVIGVAQPAVNRN-------VMLGKDLHGWSMYVDGERSWYLHNE 689

Query: 690 SKVTRDSVGFCRGTIIGVRVDLWNGTLEFYVN-----REPQGIAFYNLRRHQVLFPMISS 854
           +   R   G  RGT+IGVR+D   GT+E+ VN      +   +AF N+ R  + +P  S 
Sbjct: 690 THHNRVLGGVTRGTVIGVRLDCDRGTMEYTVNDRKRIYQDDSMAFTNMPR-GLYYPAFSV 748

Query: 855 TAAQS 869
            A  S
Sbjct: 749 NANSS 753


>AC084156-2|AAK68490.2|  243|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.3 protein.
          Length = 243

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
 Frame = +3

Query: 423 VLTNDLKQVTF--HPFYSSGTAVVRGNCPMIHNYHYYWEIKMLTDTYGTDILIGVGSNKV 596
           ++  D  ++T   HP  +  T  +RG       +H  W+I+      GT  ++GV +   
Sbjct: 36  IIVKDQDKLTLYRHPVPNC-TDCIRGKMGYSRGFHV-WQIEWPERQRGTHAVVGVATKNA 93

Query: 597 NISDPQFTFTSLIGQDEESYGLS------YTGAVRHNSKVTRDSVGFCRGTIIGVRVDLW 758
            +   ++T  +L+G + ESYG +      + G+ +          GF     I   +D+ 
Sbjct: 94  PLQAAEYT--TLVGSNNESYGWNIATRECHYGSWKWKYPYGNGRDGFNVPEKIYCILDME 151

Query: 759 NGTLEFYVNREPQGIAFYNLRRHQVLFPMISSTAAQSSMKLIYAAS 896
            G L F  + E  G+ F NLR  + L+P +++      + + +  S
Sbjct: 152 QGNLSFATDNEYLGVVFQNLRGKR-LYPAVATLYGDCEITMTHLGS 196


>Z81016-1|CAB02666.1|  219|Caenorhabditis elegans Hypothetical
           protein F21G4.3 protein.
          Length = 219

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 25/81 (30%), Positives = 38/81 (46%)
 Frame = +3

Query: 546 TDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHNSKVTRDSVGFCR 725
           TDT  T + +G+G+   N+S  Q+ F   +  D E +G     A   NS++   S+G   
Sbjct: 74  TDTSATFVRVGIGA---NVSIEQY-FKKKLSADSEFFGAD--PAFMENSQI-YSSIGTFF 126

Query: 726 GTIIGVRVDLWNGTLEFYVNR 788
              +G    L   TL+F V R
Sbjct: 127 PFAVGNETGLKQATLKFSVER 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,936,629
Number of Sequences: 27780
Number of extensions: 441139
Number of successful extensions: 1177
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)