Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K24
(1143 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 58 2e-09
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 46 7e-06
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 41 4e-04
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 37 0.005
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 31 0.30
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 27 3.7
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 4.9
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.5
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 26 8.5
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 26 8.5
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 58.4 bits (135), Expect = 2e-09
Identities = 45/142 (31%), Positives = 70/142 (49%)
Frame = +1
Query: 523 SKTPNKADRFIPSRSNSNYDLCHYMLSRDDDKSEETPQTAAGEAIGRALNDTEPGRLLQY 702
S+ +++DRFIPSR N+ ++ S D + ++ A EA G LN R+L +
Sbjct: 81 SRPASRSDRFIPSRPNTANA---FVNSISSDVPFDYSESVA-EACGFDLNT----RVLAF 132
Query: 703 TCKAPAAPEGYQNRLRVVYSQTKVPSSVKCNTRYIPQAPDRILDAPEIXXDYXXNLVDXS 882
AP A + LR +++ + P R+ P+R+LDAP I DY NL+D S
Sbjct: 133 KLDAPEAKKPVD--LRTQHNRPQRPVVTPAKRRF-NTTPERVLDAPGIIDDYYLNLLDWS 189
Query: 883 ASXXLAXXXGNSXYLWNAGXGT 948
+A + Y+WNA G+
Sbjct: 190 NLNVVAVALERNVYVWNADSGS 211
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 46.4 bits (105), Expect = 7e-06
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 799 RYIPQAPDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNSXYLWNAGXG 945
R P+ P +ILDAP + D+ NL+D S LA +S YLW+A G
Sbjct: 107 RAFPKTPYKILDAPYLKNDFYLNLLDWGQSNVLAVGLASSIYLWSAASG 155
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 745 LRVVYSQTK-VPSSVKCNTRYIPQAPDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNSX 921
L V S TK + S+ + R +P P R+LDAP + D+ NL+D LA +
Sbjct: 213 LSPVRSITKDLISASRLEGRELPSIPYRVLDAPGLAGDFYLNLLDWGQCNMLAVALASRV 272
Query: 922 YLWN 933
YLW+
Sbjct: 273 YLWS 276
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 817 PDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNSXYLWNAGXG 945
P RILDAPE+ D+ +L+ S LA + YLW+ G
Sbjct: 179 PFRILDAPELRDDFYTSLLSWSPKGDLAIGLAENIYLWSKELG 221
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 31.1 bits (67), Expect = 0.30
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 811 QAPDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNSXYLWN 933
+ P RILDAP + D+ + + S + LA + YLW+
Sbjct: 147 ETPLRILDAPGLLDDFYISPLAWSTNGELAVALAQNVYLWS 187
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +1
Query: 289 NENINPSLSNSFKNHSNINISSCNQSLQKLSISANQSCNNSAL 417
N+ L +S+K+H ++N + + +Q + NQ C ++
Sbjct: 78 NQTEFEQLRDSYKSHGDLNSAINDSRIQSIIFELNQQCEKESI 120
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 289 NENINPSLSNSFKNHSNINISSCNQSLQKLSISANQSCNNSALSNNKTPTRNEN 450
N N N + N N+S N QS L A+ N+S+ ++NK N N
Sbjct: 564 NNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNN 617
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 289 NENINPSLSNSFKNHSNINISSCNQSLQKLSISANQSCNNSALSNNKTPTRNEN 450
+ N N S +NS +++N N S+ + KLS + + + S N N N
Sbjct: 517 SNNSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMASSFLGSSGNNNNNNNSN 570
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 259 PLQRWAKKGCNENINPSLSNS-FKNHSNINISSCNQSLQKLS 381
PL R + N NI+ ++SN+ FK + C Q+L+ +S
Sbjct: 47 PLSRGLQSDVNSNISRNISNTFFKKSIFFFVYYCKQALEFIS 88
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 523 MLCLGLVLSNDLETSFSKESFFLSYFHFSLVFYYWTMHYCYNFD 392
MLC+ ++ N + + SK FL Y F+ YY + N+D
Sbjct: 123 MLCMVDIVVNHMGHAGSKPVNFLLYQPFNSGKYYHNWQFVQNYD 166
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = +1
Query: 745 LRVVYSQTKVPSSVKCNTRYIPQAPDRILDAPEIXXDYXXNLV 873
L + T +PS V+ +Y+ + I + P I Y ++
Sbjct: 703 LATTFQDTNLPSGVQLQQKYVMSGVNEIFEPPIIHVSYVTGVI 745
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,358,279
Number of Sequences: 5004
Number of extensions: 65148
Number of successful extensions: 209
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 609607692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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