Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K24
         (1143 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    84   2e-16
02_05_0420 + 28821717-28821854,28821944-28822210,28822299-288225...    76   6e-14
09_02_0030 + 3115502-3115750,3115835-3116104,3116193-3116633,311...    63   3e-10
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130...    52   6e-07
01_07_0350 + 42941976-42942401,42942510-42942737,42943201-429433...    51   1e-06
05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,536...    29   6.9  

>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 49/134 (36%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = +1

Query: 544  DRFIPSRSNSNYDLCHYMLSRDDDKSEETPQTAAGEAIGRALND---TEPGRLLQYTCKA 714
            DRFIP RS  + D+ HY+L+      E    + A EA  + L +       R+L +  K 
Sbjct: 2951 DRFIPDRSAMDMDMAHYLLTEPRKDKENAAASPAKEAYRKLLAEKILNNRTRILSFRNKP 3010

Query: 715  PAAPEGYQNRLRVVYSQTKVPSSVKCNTRYIPQAPDRILDAPEIXXDYXXNLVDXSASXX 894
            P  PE     LR       + +      RYIPQ+ +R LDAPE+  DY  NL+D  +S  
Sbjct: 3011 PE-PESILTELRA--DAASIQAKPAKQRRYIPQSAERTLDAPELVDDYYLNLLDWGSSNV 3067

Query: 895  LAXXXGNSXYLWNA 936
            L+   GNS YLW+A
Sbjct: 3068 LSIALGNSVYLWDA 3081


>02_05_0420 +
           28821717-28821854,28821944-28822210,28822299-28822568,
           28822656-28823246,28823336-28823479
          Length = 469

 Score = 75.8 bits (178), Expect = 6e-14
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
 Frame = +1

Query: 520 ASKTPNK---ADRFIPSRSNSNYDLCHYMLSRDDDKSEETPQTAAGEAIGRALND---TE 681
           AS+ P+     DRFIP RS  + D+ HY+L+      E    + + E   R L +     
Sbjct: 37  ASRNPSAKCYGDRFIPDRSAMDMDMAHYLLTEPKKDKENAAASPSKEVYRRLLAEKLLNN 96

Query: 682 PGRLLQYTCKAPAAPEGYQNRLRVVYSQTKVPSSVKCNTRYIPQAPDRILDAPEIXXDYX 861
             R+L +  K P  PE           Q K P+  +   RYIPQ+ +R LDAP++  DY 
Sbjct: 97  RTRILAFRNKPPE-PENVSAADTASTHQAK-PAKQR---RYIPQSAERTLDAPDLVDDYY 151

Query: 862 XNLVDXSASXXLAXXXGNSXYLWNAGXGT 948
            NL+D  +   L+   G++ YLW+A  G+
Sbjct: 152 LNLLDWGSKNVLSIALGDTVYLWDASSGS 180


>09_02_0030 +
           3115502-3115750,3115835-3116104,3116193-3116633,
           3116697-3116783,3116872-3116973,3117532-3117631,
           3117791-3117807
          Length = 421

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
 Frame = +1

Query: 580 DLCHYMLSRDDDKSEETPQTA-AGEAIGRALND---TEPGRLLQYTCKAPAAPEGYQNRL 747
           D+ +++L+    + E T   + A EA  R L +       R+L +  K P  PEG   +L
Sbjct: 4   DMAYFLLTEPKKEKENTDMLSPAEEAYKRLLAEKLLNNRSRILAFRNKPPE-PEGIVQQL 62

Query: 748 ---RVVYSQTKVPSSVKCNTRYIPQAPDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNS 918
               +  SQTK P+  KC  R+IPQ+ +R LDAP I  D+  N++D      ++   GN+
Sbjct: 63  LYETLTSSQTK-PAR-KC--RHIPQSSERTLDAPGIVDDFYLNILDWGCKNVMSIALGNT 118

Query: 919 XYLWNAGXGT 948
            YLWN+  G+
Sbjct: 119 LYLWNSADGS 128


>03_01_0161 +
           1307206-1307769,1307979-1308101,1308182-1308286,
           1308688-1308867,1308988-1309050,1309151-1309345,
           1309704-1309805,1309885-1309947,1310045-1310113,
           1310215-1310270,1310587-1310755
          Length = 562

 Score = 52.4 bits (120), Expect = 6e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +1

Query: 799 RYIPQAPDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNSXYLWNA 936
           R IP++P ++LDAP +  D+  NLVD S+   LA   GN  YLWNA
Sbjct: 180 RKIPRSPYKVLDAPALQDDFYLNLVDWSSHNILAVGLGNCVYLWNA 225


>01_07_0350 +
           42941976-42942401,42942510-42942737,42943201-42943380,
           42943515-42943730,42943854-42943955,42944377-42944439,
           42944526-42944594,42945662-42945730,42947003-42947069,
           42947449-42947514,42947600-42947697,42947820-42947857,
           42947929-42948016,42948101-42948373,42948470-42948535,
           42948624-42948779
          Length = 734

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +1

Query: 799 RYIPQAPDRILDAPEIXXDYXXNLVDXSASXXLAXXXGNSXYLWNA 936
           R +P+ P ++LDAP +  D+  NLVD S+   LA   GN  YLW+A
Sbjct: 134 RKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGNCVYLWSA 179


>05_01_0599 +
           5368091-5368123,5368212-5368383,5369237-5369335,
           5369636-5369748,5369824-5369916,5370081-5370244,
           5370328-5370564,5370739-5370883,5370982-5371160,
           5371997-5372142,5372239-5372366,5372441-5372614,
           5372706-5372735,5373219-5373380,5373460-5373705,
           5373733-5373870,5373974-5374174,5374304-5374448,
           5374575-5374681,5374830-5374970,5375274-5375539,
           5375621-5375745,5375843-5376109,5376250-5376263
          Length = 1174

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 175 EFRCIMSQFNYLNEINSLATMDGPITRGPLQRWAKKGCNENINPSLSN 318
           +++CI+S     N +  L  MDG      L+  AKK   E I P+  N
Sbjct: 504 DWKCIISMLLDENPLTELTDMDGTNLVRMLRASAKKAVGERIVPATDN 551


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,728,712
Number of Sequences: 37544
Number of extensions: 378096
Number of successful extensions: 912
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3468127212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)