Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K24
         (1143 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    24   2.2  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    24   2.2  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    24   2.2  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    24   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   6.7  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 92  YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 121


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 325 YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 354


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 187 YNETRSIVQINKHNYNSFIKNKSFQSHLNI 98
           YN   +    NKHNYN    N ++   + I
Sbjct: 325 YNYNNNYNNYNKHNYNKLYYNINYIEQIPI 354


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +1

Query: 346 ISSCNQSLQKLSISANQSCNNSALSNNKTPTRNEN 450
           + +C ++    +I+A  +  N++ +NN     N N
Sbjct: 216 LETCQRNSNNSTITAGNANTNASNNNNNNNNNNNN 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,802
Number of Sequences: 438
Number of extensions: 4570
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 38680821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)