Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K23
(1168 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0042 - 20443686-20443793,20444083-20444172,20444463-204445... 49 8e-06
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680... 33 0.43
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 31 1.3
04_04_0764 - 27889257-27889394,27889472-27890128,27904516-279045... 30 3.1
03_06_0528 - 34526038-34526164,34526250-34526500,34526584-345268... 30 3.1
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 30 4.0
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 30 4.0
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 5.3
04_04_1517 + 34125549-34125634,34125725-34125789,34125878-341260... 29 9.3
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 9.3
>09_06_0042 -
20443686-20443793,20444083-20444172,20444463-20444570,
20445144-20445206,20445685-20445795,20445886-20445955,
20447517-20447539
Length = 190
Score = 48.8 bits (111), Expect = 8e-06
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = +3
Query: 537 EELRTRLIASRGRAKKHQDITNEDLLAAVKKL------RIFGNGFTVVPISKGKWLVQSV 698
E+L T A+KH+ IT E ++ +L + G+GF V+ + K K LV+SV
Sbjct: 51 EQLATFRTQLEEFARKHKVITIELKWHSIFQLLSNFVYMVLGSGFEVISVGKKK-LVRSV 109
Query: 699 PGELNMDQTLVLQKASGLGTAWVSVSVLTXDLGWTETXAXNAXNHMVREGLXXVD 863
P ELN D +L+ A G +V+V + W+ A + +++EGL +D
Sbjct: 110 PTELNKDHNGILELAQAEG--FVTVEQVERKFSWSTGRAIDVLETLLKEGLAMID 162
Score = 45.2 bits (102), Expect = 1e-04
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 180 MRRRAGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHK---SEI 350
MRRR G+ +Q +++++ G + + + M +QL FR LE+FA KHK E+
Sbjct: 15 MRRRPGIAGLQNAAATRDQFRLVGENVAKVRTDVMKEQLATFRTQLEEFARKHKVITIEL 74
Query: 351 KKNAQFR--RQFQEMCAAIGVDPLASGK 428
K ++ F+ F M G + ++ GK
Sbjct: 75 KWHSIFQLLSNFVYMVLGSGFEVISVGK 102
>09_06_0205 - 21567467-21567655,21567791-21567876,21567965-21568037,
21568267-21568326,21568887-21568935,21569328-21569431,
21569587-21569640,21569719-21569763,21569817-21569879,
21570415-21570615,21570620-21570797,21570900-21570993,
21571075-21572478,21572560-21572604,21572710-21572788,
21573424-21573589,21573679-21573771,21573872-21573929,
21574063-21574120,21574210-21574367,21575130-21575177,
21575269-21575320,21575404-21575529
Length = 1160
Score = 33.1 bits (72), Expect = 0.43
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 459 FYYELGVQIVEVCLATNYKNGGLITLEELRTRLIASRGRAKKHQDITNEDLLAAVKKLRI 638
FY + ++V V + T + I LEELR ++++ GR + D + EDL+ ++
Sbjct: 925 FYVHILYEVVSVYMVTKHAADERIRLEELRRKVLSDDGRGITYLD-SEEDLVLPETGFQL 983
Query: 639 FGNGFTVVPISKGKWLVQS 695
F + I W++ S
Sbjct: 984 FQK--YMQQIQSWGWIINS 1000
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Frame = +3
Query: 216 HRLEQEKY--KEKGTEIQENQFQQMSKQLEVFR--ENLEDFASK-----HKSEIKKNAQF 368
H++ QEK+ ++K E Q+ QFQ SK+ E R + L + K + + K+NAQ
Sbjct: 762 HQMSQEKHHWQQKHREEQQQQFQNQSKEQEQERRMQKLRELRKKKNKRTQRRKRKQNAQV 821
Query: 369 RRQFQ 383
+Q Q
Sbjct: 822 MKQHQ 826
>04_04_0764 -
27889257-27889394,27889472-27890128,27904516-27904572,
27904935-27905032,27905047-27905113
Length = 338
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 687 VQSVPGELNMDQTLVLQKASGLGTAWVSVSVLTXDLGWTETXAXNAXNHMVRE 845
V +VP ++ +L+KA G GTAW+S + T T N +H++ E
Sbjct: 218 VVAVPMTAGIESQKLLKKAVGGGTAWMSNIDDRGSVAITTTPGSNIKSHVMSE 270
>03_06_0528 -
34526038-34526164,34526250-34526500,34526584-34526804,
34526963-34527017
Length = 217
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -2
Query: 495 TPLLFALLAHSKNHQYQEQTRILSPKPVDPHRWQHTFPEIAF*TEH 358
+PL ++ + +H YQ + P P PH H +F +H
Sbjct: 116 SPLARTVMTRADDHPYQSYSHSEPPSPAAPHAGDHRHQRSSFAADH 161
>07_03_1147 + 24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 510 YKNGGLITLEELRTRLIASRGRAKKHQDITNEDLLAAVKKL 632
YK GG TLE LRT +A Q +DL K+L
Sbjct: 1051 YKGGGECTLENLRTLCVACHSEVTCAQQKERKDLTKKAKEL 1091
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.9 bits (64), Expect = 4.0
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +3
Query: 171 QPKMRRRAG---VGAIQK-HRLEQEKYKE-KGTEIQENQFQQMSKQLEVFRENLEDFASK 335
+ K RR+A + A++K H LE + E K E E F + ++++ + L S+
Sbjct: 1510 ETKRRRKAESEMLSALKKVHDLEHQYLNELKRREAVEETFARQKEEIQETKRELNKIRSR 1569
Query: 336 HKSEIKKNAQ 365
H +EIK + +
Sbjct: 1570 HMTEIKAHEE 1579
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -3
Query: 386 FLKLPSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLD 207
F ++ EL +L TLV+ ++ + + + + + L F+YF L+F F +V L
Sbjct: 1245 FGQVAIELPYILVQTLVYGVLVYSMIGFEWTVAKFIWYLFFMYFTLLYFTFFGMMAVGLT 1304
Query: 206 CTYTCAA 186
+ AA
Sbjct: 1305 PNESIAA 1311
>04_04_1517 +
34125549-34125634,34125725-34125789,34125878-34126085,
34126819-34126911,34127302-34127389,34127788-34128060
Length = 270
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 519 GGLITLEELRTRLIASRGRAKKHQDITNEDLLAAVKKLRIFGNGFTVVPISKGKWLVQSV 698
G T+ +LR +L RAKK D + ++A K + +G+ S+ +WL S
Sbjct: 119 GRAFTVSDLRKKL-----RAKKFPDNAVDSVIADFKSRGLLNDGYYAESFSRSRWL-SST 172
Query: 699 PGELNMDQTL 728
G + Q L
Sbjct: 173 WGPKRIKQAL 182
>01_05_0662 - 24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = -3
Query: 386 FLKLPSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLD 207
F ++ EL ++ TL++ ++ + + + + L L F+YF L+F F +V L
Sbjct: 1270 FGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLT 1329
Query: 206 CTYTCAA 186
+ AA
Sbjct: 1330 PNESIAA 1336
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,213,511
Number of Sequences: 37544
Number of extensions: 511267
Number of successful extensions: 1493
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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