Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K21
         (1168 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0133 + 1062365-1063057,1063210-1063318,1063914-1064005,106...    33   0.57 
01_01_0490 + 3620523-3623403,3623524-3623996                           31   1.7  
11_01_0535 + 4234282-4235082                                           30   3.1  
10_08_0445 + 17989438-17990895                                         30   4.0  
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521...    29   5.3  
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011...    29   5.3  
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319...    29   9.3  

>08_01_0133 +
           1062365-1063057,1063210-1063318,1063914-1064005,
           1064399-1064560,1064718-1064834,1065029-1065127
          Length = 423

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 163 PPQRKQEASWVLYETDAND-LPEDAPPHVPPSAEKRPWKIVWRNVILFFILHVGGVYGGY 339
           PP++K+       + + ++ +   A P  PP     PW+  W +V +  +L VGG+  G 
Sbjct: 154 PPKKKKVVVVESADLETHESVGTAASPPPPPPVALTPWEKFWISVAV--VLGVGGLVFGL 211

Query: 340 LFLFK 354
           +FL K
Sbjct: 212 IFLIK 216


>01_01_0490 + 3620523-3623403,3623524-3623996
          Length = 1117

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 124 KLIIISTLFQGKMPPQRKQEASWVLYETDANDLPEDAPPHV 246
           KL++I     G++PP+     S V +    N L  D PP V
Sbjct: 446 KLLLIDNTLSGEIPPEIGNCTSLVRFRASGNHLAGDIPPEV 486


>11_01_0535 + 4234282-4235082
          Length = 266

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 361 WRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLP 468
           W  + +A FLY C  LG  A   RLW    +  + P
Sbjct: 220 WTPAAWAFFLYTCVNLGPRARDQRLWYISKFGDKYP 255


>10_08_0445 + 17989438-17990895
          Length = 485

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +1

Query: 205 TDANDLPEDAPPHV--PPSAEKRPWK 276
           T  N  P  +PPHV  PP+  +RPW+
Sbjct: 408 TATNMTPPPSPPHVRAPPAPARRPWR 433


>04_01_0399 -
           5214183-5214206,5215437-5215502,5219537-5219635,
           5219746-5219817,5219918-5220491,5220575-5220687,
           5220842-5220941,5221059-5221181,5221268-5221335,
           5221461-5221610,5221715-5221858,5222097-5222288,
           5222710-5222794,5222892-5223043,5223138-5223296,
           5223552-5223605,5223698-5223836,5223955-5224088,
           5224200-5225117
          Length = 1121

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 303 LYSACRWCLWRIPVPFQSHVEDFYIRHIFVLVFGVGYHSW 422
           L S CRWCL     P Q+++ED +    F+ V   G  SW
Sbjct: 695 LTSHCRWCL--TGTPLQNNLEDLFSLLCFLHVEPWGDASW 732


>01_06_0430 + 29299970-29300031,29300162-29300294,29301057-29301160,
            29302201-29302372,29302488-29302628,29302707-29303055,
            29303133-29305477
          Length = 1101

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 366  PPHGFEKEQVSSINTTDMQNKEQNHVSPHNLP 271
            PP G  K Q + +NT  +  KE+N  SP   P
Sbjct: 1035 PPLGKGKSQEADLNTVSVTGKEENTESPAETP 1066


>05_01_0406 +
           3197189-3197389,3197491-3197628,3198463-3198544,
           3198658-3198734,3198829-3198935,3199367-3199505,
           3200602-3200718,3200850-3200941,3201096-3201162,
           3201249-3201355,3201468-3201546,3201751-3201894,
           3202095-3202235
          Length = 496

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = +1

Query: 580 HNATRGFFFSHIGWLLLRKHPEI----KAKGHTVDVNDLHNDPILRFQKKYYQILMPLAC 747
           HN T G    HI WL + +   I     A      VN++  D  + F KKY+   + +A 
Sbjct: 148 HNLTYGIDLDHIRWLGVLQRIAIGYFLAAISEIWLVNNISVDSAISFVKKYFMEWI-VAV 206

Query: 748 FIMPTYVPTLWGETVWN 798
            I   YV  L G  V N
Sbjct: 207 MISALYVGLLLGLYVSN 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,730,870
Number of Sequences: 37544
Number of extensions: 669796
Number of successful extensions: 1918
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)