Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K19
(1212 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.008
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.014
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.076
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.076
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.076
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.41
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.54
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 2.2
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 2.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 2.2
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 2.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.9
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 5.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.6
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 6.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXXPPXXKKXX 1039
PPP PP G P GG PP GG PPP P G PP K
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGG--CPPPPPPPPPGGFKGG 783
Query: 1040 PP 1045
PP
Sbjct: 784 PP 785
Score = 34.7 bits (76), Expect = 0.13
Identities = 29/88 (32%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +2
Query: 836 PPXXXKXXPPPX-PPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXX 1012
PP PPP PP GG P GG PP GG PPP P G
Sbjct: 707 PPITGGPPPPPGLPPI-TGGPPPPPPP-----GGLPPITGG-PPPPPPPGGLPPISGGPP 759
Query: 1013 XPPXXKKXXPPGXXXXKXXKXGXXGXPP 1096
PP PP G G PP
Sbjct: 760 PPPPPPGGCPP--PPPPPPPGGFKGGPP 785
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKP 967
PP PPP PP G P GG PPP G P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.1 bits (72), Expect = 0.41
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +1
Query: 817 PXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPXGGGPPPXXGXXKTPPXXPXGXXX 996
P PP PP G PP P GG PP G PP P G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPGGCPP 770
Query: 997 XKXXXXPPXXKKXXPP 1044
P K PP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.71
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 906 PXGXXPXGGGXPPPX----GGXXNPPXXPXGXXXXKXXXXPPPG 1025
P G P GG PPP G PP P G PPPG
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.71
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 954 PPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGG 859
PP GG PPP PP P GG GG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 972 GGGFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGG 871
GG PP GG PPP PP P GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 734
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPX-----GG--XXKPPPXPXG 985
PPP PP G P GG PPP GG PPP P G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXXPPXXKKXX 1039
PPP PP G P GG PP GG PPP P G PP K
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGG--CPPPPPPPPPGGFKGG 783
Query: 1040 PP 1045
PP
Sbjct: 784 PP 785
Score = 34.7 bits (76), Expect = 0.13
Identities = 29/88 (32%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +2
Query: 836 PPXXXKXXPPPX-PPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXX 1012
PP PPP PP GG P GG PP GG PPP P G
Sbjct: 707 PPITGGPPPPPGLPPI-TGGPPPPPPP-----GGLPPITGG-PPPPPPPGGLPPISGGPP 759
Query: 1013 XPPXXKKXXPPGXXXXKXXKXGXXGXPP 1096
PP PP G G PP
Sbjct: 760 PPPPPPGGCPP--PPPPPPPGGFKGGPP 785
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKP 967
PP PPP PP G P GG PPP G P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 33.1 bits (72), Expect = 0.41
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +1
Query: 817 PXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPXGGGPPPXXGXXKTPPXXPXGXXX 996
P PP PP G PP P GG PP G PP P G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPGGCPP 770
Query: 997 XKXXXXPPXXKKXXPP 1044
P K PP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.71
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 906 PXGXXPXGGGXPPPX----GGXXNPPXXPXGXXXXKXXXXPPPG 1025
P G P GG PPP G PP P G PPPG
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.71
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 954 PPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGG 859
PP GG PPP PP P GG GG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 972 GGGFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGG 871
GG PP GG PPP PP P GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 734
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPX-----GG--XXKPPPXPXG 985
PPP PP G P GG PPP GG PPP P G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXXPPXXKKXX 1039
PPP PP G P GG PP GG PPP P G PP K
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGG-LPPISGGPPPPPPPPGG--CPPPPPPPPPGGFKGG 366
Query: 1040 PP 1045
PP
Sbjct: 367 PP 368
Score = 34.7 bits (76), Expect = 0.13
Identities = 29/88 (32%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +2
Query: 836 PPXXXKXXPPPX-PPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXX 1012
PP PPP PP GG P GG PP GG PPP P G
Sbjct: 290 PPITGGPPPPPGLPPI-TGGPPPPPPP-----GGLPPITGG-PPPPPPPGGLPPISGGPP 342
Query: 1013 XPPXXKKXXPPGXXXXKXXKXGXXGXPP 1096
PP PP G G PP
Sbjct: 343 PPPPPPGGCPP--PPPPPPPGGFKGGPP 368
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKP 967
PP PPP PP G P GG PPP G P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 33.1 bits (72), Expect = 0.41
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +1
Query: 817 PXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPXGGGPPPXXGXXKTPPXXPXGXXX 996
P PP PP G PP P GG PP G PP P G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPPPPPGGCPP 353
Query: 997 XKXXXXPPXXKKXXPP 1044
P K PP
Sbjct: 354 PPPPPPPGGFKGGPPP 369
Score = 32.3 bits (70), Expect = 0.71
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 906 PXGXXPXGGGXPPPX----GGXXNPPXXPXGXXXXKXXXXPPPG 1025
P G P GG PPP G PP P G PPPG
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 32.3 bits (70), Expect = 0.71
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 954 PPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGG 859
PP GG PPP PP P GG GG
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 972 GGGFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGG 871
GG PP GG PPP PP P GG
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGG 317
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPX-----GG--XXKPPPXPXG 985
PPP PP G P GG PPP GG PPP P G
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.9 bits (84), Expect = 0.014
Identities = 33/129 (25%), Positives = 34/129 (26%), Gaps = 1/129 (0%)
Frame = +1
Query: 571 GGXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXX 750
G G PPP P G P P PQ G G
Sbjct: 346 GSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAF-------- 397
Query: 751 XXGGGXXPPXXKKXXGXPPKXPPXAP-PXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPX 927
G P G PP P AP PP G G + PP G P
Sbjct: 398 ---GAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPV 454
Query: 928 GGGPPPXXG 954
G PP G
Sbjct: 455 GAPPPGAAG 463
Score = 33.1 bits (72), Expect = 0.41
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = -3
Query: 1024 PGGGXXXFFXXXXPXGXXGGFXXPPXGGG---XPPPXGXXPXG 905
P GG P G GGF PP GG PPP G P G
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Score = 32.3 bits (70), Expect = 0.71
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +1
Query: 760 GGXXPPXXKKXXGXPPKXPPXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPXGGGP 939
GG PP P P P G GG PP G G
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 940 PPXXGXXKTPPXXPXG 987
PP G P P G
Sbjct: 425 PPQGGPGGFGPPPPGG 440
Score = 31.5 bits (68), Expect = 1.2
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Frame = -1
Query: 1113 PPXXXXGGXPXXPXXXFXXXXXPGGXXFFXXG--GXXXXFXXXXXPXGXGGGFXXPPXGG 940
PP G P F PGG + G P G GGF PP GG
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Query: 939 GX---PPPXXXXXXGXXKXPPLPXGGXGG 862
PPP G PP G GG
Sbjct: 441 PGAYGPPPTGFPPVGAP--PPGAAGAPGG 467
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 866 PXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXG 985
P PP G G GG PPP GG P P G
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.076
Identities = 21/88 (23%), Positives = 22/88 (25%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXX 1015
PP PPP P G G PPP G PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 1016 PPXXKKXXPPGXXXXKXXKXGXXGXPPK 1099
PP P G PP+
Sbjct: 307 PPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXXPPXXKKXX 1039
PPP PP G G G PPP PPP G PP
Sbjct: 238 PPPPPPKGS---------PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 1040 PP 1045
PP
Sbjct: 289 PP 290
Score = 29.9 bits (64), Expect = 3.8
Identities = 29/122 (23%), Positives = 31/122 (25%)
Frame = +1
Query: 568 GGGXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXX 747
G G PPP G P G P P P G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPP------PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Query: 748 XXXGGGXXPPXXKKXXGXPPKXPPXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPX 927
G PP + G PP +PP PP K PP G P
Sbjct: 305 GSPPTGSLPP--PQAGGSPPPAGTGSPP-PPPRQKRQAPERSPPTGSPPTGSPPTGRPPR 361
Query: 928 GG 933
GG
Sbjct: 362 GG 363
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 921 PXGGGXPPPXGGXXNPPXXPXGXXXXKXXXXPPP 1022
P GG PPP G PP P G PPP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRG--SPPTGSLPPP 315
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/135 (20%), Positives = 31/135 (22%), Gaps = 2/135 (1%)
Frame = +1
Query: 574 GXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXX 753
G PPP GG P G P G P GG
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 337
Query: 754 XGGGXXPPXXKKXXGXPPK-XPPXAPPXXPPXXKXXXXXXXXXG-KGGXFXXPPXGXXPX 927
PP G PP PP P G +GG P
Sbjct: 338 QAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEES 397
Query: 928 GGGPPPXXGXXKTPP 972
G ++PP
Sbjct: 398 SESREEPRGPRRSPP 412
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.076
Identities = 21/88 (23%), Positives = 22/88 (25%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXX 1015
PP PPP P G G PPP G PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 1016 PPXXKKXXPPGXXXXKXXKXGXXGXPPK 1099
PP P G PP+
Sbjct: 328 PPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXXPPXXKKXX 1039
PPP PP G G G PPP PPP G PP
Sbjct: 259 PPPPPPKGS---------PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 1040 PP 1045
PP
Sbjct: 310 PP 311
Score = 29.9 bits (64), Expect = 3.8
Identities = 29/122 (23%), Positives = 31/122 (25%)
Frame = +1
Query: 568 GGGXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXX 747
G G PPP G P G P P P G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPP------PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Query: 748 XXXGGGXXPPXXKKXXGXPPKXPPXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPX 927
G PP + G PP +PP PP K PP G P
Sbjct: 326 GSPPTGSLPP--PQAGGSPPPAGTGSPP-PPPRQKRQAPERSPPTGSPPTGSPPTGRPPR 382
Query: 928 GG 933
GG
Sbjct: 383 GG 384
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 921 PXGGGXPPPXGGXXNPPXXPXGXXXXKXXXXPPP 1022
P GG PPP G PP P G PPP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRG--SPPTGSLPPP 336
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/135 (20%), Positives = 31/135 (22%), Gaps = 2/135 (1%)
Frame = +1
Query: 574 GXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXX 753
G PPP GG P G P G P GG
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 358
Query: 754 XGGGXXPPXXKKXXGXPPK-XPPXAPPXXPPXXKXXXXXXXXXG-KGGXFXXPPXGXXPX 927
PP G PP PP P G +GG P
Sbjct: 359 QAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEES 418
Query: 928 GGGPPPXXGXXKTPP 972
G ++PP
Sbjct: 419 SESREEPRGPRRSPP 433
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.076
Identities = 21/88 (23%), Positives = 22/88 (25%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXX 1015
PP PPP P G G PPP G PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 1016 PPXXKKXXPPGXXXXKXXKXGXXGXPPK 1099
PP P G PP+
Sbjct: 313 PPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXXXPPXXKKXX 1039
PPP PP G G G PPP PPP G PP
Sbjct: 244 PPPPPPKGS---------PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 1040 PP 1045
PP
Sbjct: 295 PP 296
Score = 29.9 bits (64), Expect = 3.8
Identities = 29/122 (23%), Positives = 31/122 (25%)
Frame = +1
Query: 568 GGGXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXX 747
G G PPP G P G P P P G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPP------PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Query: 748 XXXGGGXXPPXXKKXXGXPPKXPPXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPX 927
G PP + G PP +PP PP K PP G P
Sbjct: 311 GSPPTGSLPP--PQAGGSPPPAGTGSPP-PPPRQKRQAPERSPPTGSPPTGSPPTGRPPR 367
Query: 928 GG 933
GG
Sbjct: 368 GG 369
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 921 PXGGGXPPPXGGXXNPPXXPXGXXXXKXXXXPPP 1022
P GG PPP G PP P G PPP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRG--SPPTGSLPPP 321
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/135 (20%), Positives = 31/135 (22%), Gaps = 2/135 (1%)
Frame = +1
Query: 574 GXGXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXX 753
G PPP GG P G P G P GG
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKR 343
Query: 754 XGGGXXPPXXKKXXGXPPK-XPPXAPPXXPPXXKXXXXXXXXXG-KGGXFXXPPXGXXPX 927
PP G PP PP P G +GG P
Sbjct: 344 QAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEES 403
Query: 928 GGGPPPXXGXXKTPP 972
G ++PP
Sbjct: 404 SESREEPRGPRRSPP 418
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXG 985
PP PP PP GG P G PPP G PPP P G
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMG--GIPPPPPMFGAPPPPPPPSG 122
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -1
Query: 984 PXGXGGGFXXPPXG-GGXPPPXXXXXXGXXKXPPLPXG 874
P GF PP G GG PPP G PP+ G
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 329 PXFXGGXPPPXXXFFFXGXPXPPP-XGGXXXXPXFF 225
P GG PPP F G P PPP GG P F
Sbjct: 77 PPGPGGIPPP-PPMFAGGIPPPPPMMGGIPPPPPMF 111
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGXPPPX---GGXXKPPP 973
PP PPP P G P GG PPP GG PPP
Sbjct: 67 PPVPNGFIPPPPGPGG------IPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 329 PXFXGGXPPPXXXFFFXGXPXPPPXGGXXXXP 234
P GG PPP F P PPP G P
Sbjct: 98 PPMMGGIPPPPP--MFGAPPPPPPPSGLGVAP 127
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.41
Identities = 29/125 (23%), Positives = 31/125 (24%), Gaps = 1/125 (0%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPX-GRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXX 1012
PP PPP PP G P PPP G PP P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Query: 1013 XPPXXKKXXPPGXXXXKXXKXGXXGXPPKXXXGGAXXXXXXXXXXXXXPXXXXXXXKKXX 1192
PP PP + PP+ G P
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG---MIP 382
Query: 1193 PPPPP 1207
PPPPP
Sbjct: 383 PPPPP 387
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = -3
Query: 628 PXFXGXPXXPPXGGXNP---XPPPXPXXXXXXXXXXXXGPXXXPPXPXGG 488
P G P PP G P PPP P P PP P G
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -3
Query: 628 PXFXGXPXXPPXGGXNPXPPPXPXXXXXXXXXXXXGPXXXPPXPXG 491
P P PP G P PPP P P PP G
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.41
Identities = 29/125 (23%), Positives = 31/125 (24%), Gaps = 1/125 (0%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPX-GRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXKKXXX 1012
PP PPP PP G P PPP G PP P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Query: 1013 XPPXXKKXXPPGXXXXKXXKXGXXGXPPKXXXGGAXXXXXXXXXXXXXPXXXXXXXKKXX 1192
PP PP + PP+ G P
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG---MIP 392
Query: 1193 PPPPP 1207
PPPPP
Sbjct: 393 PPPPP 397
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = -3
Query: 628 PXFXGXPXXPPXGGXNP---XPPPXPXXXXXXXXXXXXGPXXXPPXPXGG 488
P G P PP G P PPP P P PP P G
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -3
Query: 628 PXFXGXPXXPPXGGXNPXPPPXPXXXXXXXXXXXXGPXXXPPXPXG 491
P P PP G P PPP P P PP G
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.54
Identities = 37/142 (26%), Positives = 37/142 (26%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP G P GG P GP G
Sbjct: 179 GGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPS 238
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P G PP P APP PP G G F P G
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD--PSGAP 296
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 297 PSGGPPGPFDPSGAQPSGGPPG 318
Score = 31.9 bits (69), Expect = 0.94
Identities = 37/142 (26%), Positives = 37/142 (26%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP P GG P GP G G
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPS 208
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P G PP P APP PP G G F P G
Sbjct: 209 GGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN--PSGAP 266
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 267 PSGGPPGPFDPSGAPPSGGPPG 288
Score = 30.7 bits (66), Expect = 2.2
Identities = 36/142 (25%), Positives = 37/142 (26%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP P GG P GP G
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 298
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P + G PP P APP PP G G F P G
Sbjct: 299 GGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN--PSGAP 356
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 357 PSGGPPGPFDPSGAPPSGGPPG 378
Score = 30.3 bits (65), Expect = 2.9
Identities = 36/142 (25%), Positives = 36/142 (25%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP P GG P GP G
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P G PP P APP PP G G F P G
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN--PSGAP 431
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 432 PSGGPPGPFNPSGAPPSGGPPG 453
Score = 29.9 bits (64), Expect = 3.8
Identities = 36/144 (25%), Positives = 36/144 (25%), Gaps = 8/144 (5%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXXG 759
G PP P GG P G P G
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 760 GGXXPPXXKKXXGXPPKX-------PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXG 915
GG PP G PP P APP PP G G F P G
Sbjct: 314 GG--PPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD--PSG 369
Query: 916 XXPXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 370 APPSGGPPGPFDPSGAPPSGGPPG 393
Score = 29.9 bits (64), Expect = 3.8
Identities = 36/142 (25%), Positives = 36/142 (25%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP P GG P GP G
Sbjct: 284 GGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 343
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P G PP P APP PP G G F P G
Sbjct: 344 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD--PSGAP 401
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPG 423
Score = 29.9 bits (64), Expect = 3.8
Identities = 36/142 (25%), Positives = 36/142 (25%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP P GG P GP G
Sbjct: 329 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 388
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P G PP P APP PP G G F P G
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN--PSGAP 446
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 447 PSGGPPGPFNPSGAPPSGGPPG 468
Score = 29.9 bits (64), Expect = 3.8
Identities = 36/144 (25%), Positives = 36/144 (25%), Gaps = 8/144 (5%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXXG 759
G PP P GG P G P G
Sbjct: 344 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 403
Query: 760 GGXXPPXXKKXXGXPPKX-------PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXG 915
GG PP G PP P APP PP G G F P G
Sbjct: 404 GG--PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN--PSG 459
Query: 916 XXPXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 460 APPSGGPPGPFNPSGAPPSGGPPG 483
Score = 29.9 bits (64), Expect = 3.8
Identities = 36/142 (25%), Positives = 36/142 (25%), Gaps = 6/142 (4%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXK-KXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXX 756
G PP P GG P GP G
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 433
Query: 757 GGGXXP--PXXKKXXGXPPKX--PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXGXX 921
GG P P G PP P APP PP G G F P G
Sbjct: 434 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD--PSGAP 491
Query: 922 PXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 492 PSGGPPGPFNPSGAPPSGGPPG 513
Score = 29.5 bits (63), Expect = 5.0
Identities = 36/144 (25%), Positives = 36/144 (25%), Gaps = 8/144 (5%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXXG 759
G PP P GG P G P G
Sbjct: 359 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 418
Query: 760 GGXXPPXXKKXXGXPPKX-------PPXAPPXX-PPXXKXXXXXXXXXGKGGXFXXPPXG 915
GG PP G PP P APP PP G G F P G
Sbjct: 419 GG--PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN--PSG 474
Query: 916 XXPXGGGPPPXXGXXKTPPXXPXG 987
P GG P P P P G
Sbjct: 475 APPSGGPPGPFDPSGAPPSGGPPG 498
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXP 979
PPP PP P GG PPP G PPP P
Sbjct: 770 PPPPPPPSA-----IPLPPRLQGGIPPPPPLGIIPPPPPP 804
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 978 GXGGGFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGG 859
G GGG P GGG G P P GG GG
Sbjct: 77 GCGGGVAPAPIGGGYAQAPQAPIGGGYAAPQAPIGGGYGG 116
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Frame = +2
Query: 863 PPXPPXGRGGXXXXPXXXXXXGGGX-------PPPXGGXXKPPPXPXG 985
PP PP G G P G PPP G PPP P G
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 174
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Frame = +2
Query: 863 PPXPPXGRGGXXXXPXXXXXXGGGX-------PPPXGGXXKPPPXPXG 985
PP PP G G P G PPP G PPP P G
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 267
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Frame = +2
Query: 863 PPXPPXGRGGXXXXPXXXXXXGGGX-------PPPXGGXXKPPPXPXG 985
PP PP G G P G PPP G PPP P G
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 143
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Frame = +2
Query: 863 PPXPPXGRGGXXXXPXXXXXXGGGX-------PPPXGGXXKPPPXPXG 985
PP PP G G P G PPP G PPP P G
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTG 80
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGX---PPPXGGXXKPPPXPXG 985
PP PP PP G P G PPP G PPP P G
Sbjct: 159 PPPPKGTGSPPPPPTGE------PQDLSTEGNASRRPPPPPKGTGTPPPPPTG 205
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXP 979
PPP PP P GG PPP G PPP P
Sbjct: 770 PPPPPPPSA-----IPLPPRLQGGIPPPPPLGIIPPPPPP 804
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGX---PPPXGGXXKPPPXPXG 985
PP P PP G GG G G PP GG PPP G
Sbjct: 155 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 207
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Frame = +1
Query: 796 GXPPKXPPXAPPXXPPXXKXXXXXXXXXGK---GGXFXXPPXGXXPXGGGPPPXXGXXKT 966
G P PP A P P G G F P G GPPP G
Sbjct: 104 GMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGD 163
Query: 967 PPXXPXG 987
P P G
Sbjct: 164 PRGPPGG 170
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 836 PPXXXKXXPPPXPPXGRGGXXXXPXXXXXXGGGX---PPPXGGXXKPPPXPXG 985
PP P PP G GG G G PP GG PPP G
Sbjct: 435 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGG 487
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Frame = +1
Query: 796 GXPPKXPPXAPPXXPPXXKXXXXXXXXXGK---GGXFXXPPXGXXPXGGGPPPXXGXXKT 966
G P PP A P P G G F P G GPPP G
Sbjct: 384 GMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGD 443
Query: 967 PPXXPXG 987
P P G
Sbjct: 444 PRGPPGG 450
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 875 PXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXK 1000
P G GG P GGG P KPP P G K
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRK 659
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 875 PXGRGGXXXXPXXXXXXGGGXPPPXGGXXKPPPXPXGXXXXK 1000
P G GG P GGG P KPP P G K
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRK 659
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.0
Identities = 33/137 (24%), Positives = 37/137 (27%), Gaps = 1/137 (0%)
Frame = +1
Query: 580 GXPPPXGGXXXXPXXGGXPXKKXXXKXXXXGPXPQKGXGGGXXXXXXXXXXXXXXXXXXG 759
G PPP G P GG P + P P G G G
Sbjct: 1480 GMPPPMRGGGP-PMRGGPPMRGGPPMFRGGPPGP----GRGMPSPMMRGSSMRGGFPQRG 1534
Query: 760 GGXXPPXXKKXXGXPP-KXPPXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPXGGG 936
GG + P + PP P +GG P P GG
Sbjct: 1535 GGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPP---PLMGG 1591
Query: 937 PPPXXGXXKTPPXXPXG 987
PPP G P P G
Sbjct: 1592 PPPRLGMPPPGPPPPNG 1608
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 5.0
Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 4/90 (4%)
Frame = +2
Query: 860 PPPXPPXGRGGXXXXPXXXXXXG-GGXPPPXGGXXKP-PPXPXGXXXXKKXXXXP--PXX 1027
P P P G G P G G PPP G P PP G P P
Sbjct: 183 PGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGT 242
Query: 1028 KKXXPPGXXXXKXXKXGXXGXPPKXXXGGA 1117
PG G G P + GGA
Sbjct: 243 NTVNSPG-GPGPAGPPGPPGPPGQDGSGGA 271
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 6.6
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 805 PKXPPXAPPXXPPXXKXXXXXXXXXGKGGXFXXPPXGXXPXGGGPPPXXGXXKTPPXXP 981
P+ PP PP P + G G PP P G PP PP P
Sbjct: 710 PQQPPQGPPGPPGPQQHPGPYPGYPGYG-----PPGAMRPPAGFAPPPGAPYGYPPGAP 763
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 966 GFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGGXXFXXXG 838
G+ PP G G PPP PP GG GGG + G
Sbjct: 54 GYPRPPIGYGAPPPPP---------PPPAFGGLGGGAAYPGAG 87
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 966 GFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGGXXFXXXG 838
G+ PP G G PPP PP GG GGG + G
Sbjct: 54 GYPRPPIGYGAPPPPP---------PPPAFGGLGGGAAYPGAG 87
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 966 GFXXPPXGGGXPPPXXXXXXGXXKXPPLPXGGXGGGXXFXXXG 838
G+ PP G G PPP PP GG GGG + G
Sbjct: 54 GYPRPPIGYGAPPPPP---------PPPAFGGLGGGAAYPGAG 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.306 0.150 0.503
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,620,419
Number of Sequences: 27780
Number of extensions: 439515
Number of successful extensions: 1872
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3339026560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
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