Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K17
(1245 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 58 1e-08
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 36 0.060
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 36 0.060
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 36 0.060
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 34 0.18
AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 31 1.3
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 1.7
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 31 1.7
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 30 3.9
AL032631-13|CAA21577.2| 220|Caenorhabditis elegans Hypothetical... 30 3.9
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 58.4 bits (135), Expect = 1e-08
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 13/272 (4%)
Frame = +1
Query: 157 YAVAIYNFTSKSQS----HLPLEVGELIHLEGETEEWYCGQSL--RRDLKGAFPKSYVVK 318
YA+ Y F S L L +G+ I + G+ EW G+ + G FP +YV
Sbjct: 8 YAIVQYTFEDPLPSCDAPRLELFIGDRICVYGQHGEWGYGRKFDEKNGKCGIFPLAYVQ- 66
Query: 319 RDCVVDRCSEXXXXXXXXXXXXHDIAVTLRDWLEQWKNLYINNDERFKFMEV--SMRALL 492
+V + +I+ + +W + K L + F ++ S LL
Sbjct: 67 ---IVQK--SMFVSTSDGYLVVDEISRVINEWWTKIKELMVETTRIGSFEDLMDSFNELL 121
Query: 493 ELRAQAASGALPQDQLRRVARTSVFTIDRGNRTLDMELAVRNSNGQLVDPLKMSTYRLNA 672
++ + SG +P ++L ++ +DRGN L ++ +RN G +D +S R
Sbjct: 122 IIKTKIESGGIPIEELSKLRLRVSKLVDRGNTILGQDVVIRNEEGVPLDVESLSLLRTYE 181
Query: 673 LHDEANTRIDKNMETTPVTPNVTPAGVRTFTVCVRVHNFVCRVAXVAXLSLSLHDAAGNK 852
H + R+ M P NVT + + ++ C+ + +S+SL+D
Sbjct: 182 AHISSKGRVGSLMREKP--ENVTINDSFSLLLSIKSVELHCKYS--CEISISLYDLDKKM 237
Query: 853 L-TEHLLIRWXTPNFATTNV----VFTDFGSD 933
T+ W + + T++ +FTDF +
Sbjct: 238 FTTDSYTFLWNSGSGKHTDLNLKALFTDFAKE 269
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 58.4 bits (135), Expect = 1e-08
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 13/272 (4%)
Frame = +1
Query: 157 YAVAIYNFTSKSQS----HLPLEVGELIHLEGETEEWYCGQSL--RRDLKGAFPKSYVVK 318
YA+ Y F S L L +G+ I + G+ EW G+ + G FP +YV
Sbjct: 8 YAIVQYTFEDPLPSCDAPRLELFIGDRICVYGQHGEWGYGRKFDEKNGKCGIFPLAYVQ- 66
Query: 319 RDCVVDRCSEXXXXXXXXXXXXHDIAVTLRDWLEQWKNLYINNDERFKFMEV--SMRALL 492
+V + +I+ + +W + K L + F ++ S LL
Sbjct: 67 ---IVQK--SMFVSTSDGYLVVDEISRVINEWWTKIKELMVETTRIGSFEDLMDSFNELL 121
Query: 493 ELRAQAASGALPQDQLRRVARTSVFTIDRGNRTLDMELAVRNSNGQLVDPLKMSTYRLNA 672
++ + SG +P ++L ++ +DRGN L ++ +RN G +D +S R
Sbjct: 122 IIKTKIESGGIPIEELSKLRLRVSKLVDRGNTILGQDVVIRNEEGVPLDVESLSLLRTYE 181
Query: 673 LHDEANTRIDKNMETTPVTPNVTPAGVRTFTVCVRVHNFVCRVAXVAXLSLSLHDAAGNK 852
H + R+ M P NVT + + ++ C+ + +S+SL+D
Sbjct: 182 AHISSKGRVGSLMREKP--ENVTINDSFSLLLSIKSVELHCKYS--CEISISLYDLDKKM 237
Query: 853 L-TEHLLIRWXTPNFATTNV----VFTDFGSD 933
T+ W + + T++ +FTDF +
Sbjct: 238 FTTDSYTFLWNSGSGKHTDLNLKALFTDFAKE 269
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 58.4 bits (135), Expect = 1e-08
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 13/272 (4%)
Frame = +1
Query: 157 YAVAIYNFTSKSQS----HLPLEVGELIHLEGETEEWYCGQSL--RRDLKGAFPKSYVVK 318
YA+ Y F S L L +G+ I + G+ EW G+ + G FP +YV
Sbjct: 8 YAIVQYTFEDPLPSCDAPRLELFIGDRICVYGQHGEWGYGRKFDEKNGKCGIFPLAYVQ- 66
Query: 319 RDCVVDRCSEXXXXXXXXXXXXHDIAVTLRDWLEQWKNLYINNDERFKFMEV--SMRALL 492
+V + +I+ + +W + K L + F ++ S LL
Sbjct: 67 ---IVQK--SMFVSTSDGYLVVDEISRVINEWWTKIKELMVETTRIGSFEDLMDSFNELL 121
Query: 493 ELRAQAASGALPQDQLRRVARTSVFTIDRGNRTLDMELAVRNSNGQLVDPLKMSTYRLNA 672
++ + SG +P ++L ++ +DRGN L ++ +RN G +D +S R
Sbjct: 122 IIKTKIESGGIPIEELSKLRLRVSKLVDRGNTILGQDVVIRNEEGVPLDVESLSLLRTYE 181
Query: 673 LHDEANTRIDKNMETTPVTPNVTPAGVRTFTVCVRVHNFVCRVAXVAXLSLSLHDAAGNK 852
H + R+ M P NVT + + ++ C+ + +S+SL+D
Sbjct: 182 AHISSKGRVGSLMREKP--ENVTINDSFSLLLSIKSVELHCKYS--CEISISLYDLDKKM 237
Query: 853 L-TEHLLIRWXTPNFATTNV----VFTDFGSD 933
T+ W + + T++ +FTDF +
Sbjct: 238 FTTDSYTFLWNSGSGKHTDLNLKALFTDFAKE 269
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 35.9 bits (79), Expect = 0.060
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 160 AVAIYNFTSKSQSHLPLEVGELIHLEGETEEWYCGQSLRRDLKGAFPKSYV 312
A A+Y F +S LPL G++I + E + ++ + R G FP SYV
Sbjct: 156 ATAVYKFEPRSARELPLNRGDIIRIIREVDGYWM-EGERNGRSGIFPTSYV 205
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 166 AIYNFTSKSQSHLPLEVGELIHLEGETEEWYCGQSLRRDLKGAFPKSYV 312
AIY FT++S + L L+ GE+I + + + S + + G FP SYV
Sbjct: 220 AIYPFTARSDTELSLKRGEIITRRRQIDSNWLEGSNQIGIVGIFPASYV 268
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 AIYNFTSKSQSHLPLEVGELIHLEGETEE-WYCGQSLRRDLKGAFPKSYV 312
A+Y + + + L L ++I + + ++ W+ G SLR G FP +YV
Sbjct: 421 AVYPYQPQKEDELQLYTNDIIFVVEKCDDGWFIGTSLRTGDFGIFPGNYV 470
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 35.9 bits (79), Expect = 0.060
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 142 ENEECYAVAIYNFTSKSQSHLPLEVGELIHL-EGETEEWYCGQSLRRDLKGAFPKSYVV 315
E EE + F +++ + +E G++++L E EW+ S R KG PKS+VV
Sbjct: 93 EPEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSRQFKGFVPKSHVV 151
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 35.9 bits (79), Expect = 0.060
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 142 ENEECYAVAIYNFTSKSQSHLPLEVGELIHL-EGETEEWYCGQSLRRDLKGAFPKSYVV 315
E EE + F +++ + +E G++++L E EW+ S R KG PKS+VV
Sbjct: 137 EPEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQSNREWWYVASKSRQFKGFVPKSHVV 195
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 148 EECYAVAIYNFTSKSQSHLPLEVGELIHLEGETEEWYCGQSLRRDLKGAFPKSYV 312
++ Y V IY+F + + L L VG+ I + + +EW+ G+ R+ G FP +YV
Sbjct: 896 QQLYTV-IYDFEAVETTDLALHVGDTILVLEKNDEWWKGRCNGRE--GIFPANYV 947
>AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical
protein W03F9.4 protein.
Length = 746
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 889 NFATTNVVFTDFGSDFMXNXKV 954
+F+ NVVFT++G DFM KV
Sbjct: 515 DFSNANVVFTEYGKDFMKKAKV 536
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 804 CHSTHEVVHSDANRERPHSGRSNVRCYR--RCFHVF 703
C S +H D +RPH RSN CY RC + F
Sbjct: 311 CPSGFGGIHCDLPLQRPHCSRSNGTCYNDGRCINGF 346
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 804 CHSTHEVVHSDANRERPHSGRSNVRCYR--RCFHVF 703
C S +H D +RPH RSN CY RC + F
Sbjct: 311 CPSGFGGIHCDLPLQRPHCSRSNGTCYNDGRCINGF 346
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 804 CHSTHEVVHSDANRERPHSGRSNVRCYR--RCFHVF 703
C S +H D +RPH RSN CY RC + F
Sbjct: 311 CPSGFGGIHCDLPLQRPHCSRSNGTCYNDGRCINGF 346
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/53 (20%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 157 YAVAIYNFTSKSQSHLPLEVGELIHLEGETE-EWYCGQSLRRDLKGAFPKSYV 312
Y +A +++ + L +G+ + + + + EW+ G++ + G P SY+
Sbjct: 195 YGIAKFDYAPTQSDEMGLRIGDTVLISKKVDAEWFYGENQNQRTFGIVPSSYL 247
>AL032631-13|CAA21577.2| 220|Caenorhabditis elegans Hypothetical
protein Y106G6H.14 protein.
Length = 220
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 166 AIYNFTSKSQSHLPLEVGELIHLEGE--TEEWYCGQSLRRDLKGAFPKSYVVKRD 324
A+Y+F ++S L G+L+++ E ++W+ Q+ KG P +YV+ +
Sbjct: 24 ALYDFQARSAQELTFSEGDLMYVSDEQPNKDWF--QASIGGKKGLVPANYVISEN 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,224,741
Number of Sequences: 27780
Number of extensions: 441778
Number of successful extensions: 1186
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -