Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K17
         (1245 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   5.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   5.5  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   7.3  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   9.7  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   9.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   9.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   9.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   9.7  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   9.7  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 801 HSTHEVVHSDANRERPHSGRSNVRC 727
           H     VH+ +N   P S  SN RC
Sbjct: 308 HRGRGSVHNGSNNGSPRSPESNSRC 332


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 273 ETLTAIPLFRFTFEMNELAHFQ--REMRLGFACEIVYCNGIAF 151
           + +T   L R + ++ + A F   + +  GF   I+Y NG+ F
Sbjct: 267 QLMTRYFLERMSNDLGKTAEFDWNKPINSGFYSTIMYSNGVTF 309


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 273 ETLTAIPLFRFTFEMNELAHFQ--REMRLGFACEIVYCNGIAF 151
           + +T   L R + ++ + A F   + +  GF   I+Y NG+ F
Sbjct: 267 QLMTRYFLERMSNDLGKTAEFDWNKPINSGFYSTIMYSNGVTF 309


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 203 SLWKWASSFISKVKRK 250
           S+W + S++I KVK K
Sbjct: 317 SIWDYDSTYIPKVKNK 332


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 752 TPAGVTFGVTGVVSM--FLSIRVLASSCNAFKRYVDIFSGS 636
           TPA V  GVT V++M   +S    A    ++ + +D++ G+
Sbjct: 249 TPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGT 289


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 752 TPAGVTFGVTGVVSM--FLSIRVLASSCNAFKRYVDIFSGS 636
           TPA V  GVT V++M   +S    A    ++ + +D++ G+
Sbjct: 249 TPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGT 289


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 655 TYRLNALHDEANTRIDKNMETTPVTPNV 738
           T+     HDE +    KN++T  V P++
Sbjct: 17  THSFPGAHDEDSKEERKNVDTVLVLPSI 44


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 655 TYRLNALHDEANTRIDKNMETTPVTPNV 738
           T+     HDE +    KN++T  V P++
Sbjct: 17  THSFPGAHDEDSKEERKNVDTVLVLPSI 44


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 655 TYRLNALHDEANTRIDKNMETTPVTPNV 738
           T+     HDE +    KN++T  V P++
Sbjct: 17  THSFPGAHDEDSKEERKNVDTVLVLPSI 44


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 752 TPAGVTFGVTGVVSM--FLSIRVLASSCNAFKRYVDIFSGS 636
           TPA V  GVT V++M   +S    A    ++ + +D++ G+
Sbjct: 188 TPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGT 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,957
Number of Sequences: 438
Number of extensions: 5338
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42502302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)