Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K15
(1245 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.56
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.56
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.56
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.56
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.56
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 0.73
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 0.73
Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical pr... 30 3.0
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z68748-5|CAA92956.2| 446|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.2
U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine rec... 29 6.8
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.56
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Frame = +1
Query: 217 KMGDEGFSKLLQQAEQLTTEIEGNEE-LPRVERSLGQVLEASQELYSRVIQSGAND-IQA 390
K +E ++KL + +L +E + +E L ++ A QE+ + + AND +
Sbjct: 878 KSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSARQEVEKSL--NDANDRLSE 935
Query: 391 HLLFGSKGIDLNQISQKL--ETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVN 564
H K DL + +K E + K++ E + +E K KEN I SL DE+N
Sbjct: 936 H---EEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEE--KAAKENQIHSLQDEMN 990
Query: 565 KNSLQTTEDQKWEHMLSEWNKEKIKLMNA 651
+ K + +L E N++ + + A
Sbjct: 991 SQDETIGKINKEKKLLEENNRQLVDDLQA 1019
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.56
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Frame = +1
Query: 217 KMGDEGFSKLLQQAEQLTTEIEGNEE-LPRVERSLGQVLEASQELYSRVIQSGAND-IQA 390
K +E ++KL + +L +E + +E L ++ A QE+ + + AND +
Sbjct: 878 KSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSARQEVEKSL--NDANDRLSE 935
Query: 391 HLLFGSKGIDLNQISQKL--ETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVN 564
H K DL + +K E + K++ E + +E K KEN I SL DE+N
Sbjct: 936 H---EEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEE--KAAKENQIHSLQDEMN 990
Query: 565 KNSLQTTEDQKWEHMLSEWNKEKIKLMNA 651
+ K + +L E N++ + + A
Sbjct: 991 SQDETIGKINKEKKLLEENNRQLVDDLQA 1019
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.56
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Frame = +1
Query: 247 LQQAEQLTTEIEG--NEELPRVERSLGQVLEASQE-LYSRVIQSGANDIQAHLLFGSKGI 417
LQQA Q ++ E E+ ++E L V +A E L S + + Q H L K
Sbjct: 535 LQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEE 594
Query: 418 DLNQISQKLETLS-SKRTFEPLQPIADSDIESFLKN---EKENAILSLIDEVNKNSLQTT 585
L + +L+ + S + E +E+ L+ EK+NA+ + + E + + Q
Sbjct: 595 KLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQ 654
Query: 586 EDQKWEHMLSEWNKEKIKLMNAMI 657
E Q H L +EK++++ +
Sbjct: 655 ELQAQLHQLEVEKEEKLEMVKVQL 678
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.56
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Frame = +1
Query: 247 LQQAEQLTTEIEG--NEELPRVERSLGQVLEASQE-LYSRVIQSGANDIQAHLLFGSKGI 417
LQQA Q ++ E E+ ++E L V +A E L S + + Q H L K
Sbjct: 535 LQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEE 594
Query: 418 DLNQISQKLETLS-SKRTFEPLQPIADSDIESFLKN---EKENAILSLIDEVNKNSLQTT 585
L + +L+ + S + E +E+ L+ EK+NA+ + + E + + Q
Sbjct: 595 KLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQ 654
Query: 586 EDQKWEHMLSEWNKEKIKLMNAMI 657
E Q H L +EK++++ +
Sbjct: 655 ELQAQLHQLEVEKEEKLEMVKVQL 678
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.56
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Frame = +1
Query: 217 KMGDEGFSKLLQQAEQLTTEIEGNEE-LPRVERSLGQVLEASQELYSRVIQSGAND-IQA 390
K +E ++KL + +L +E + +E L ++ A QE+ + + AND +
Sbjct: 878 KSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSARQEVEKSL--NDANDRLSE 935
Query: 391 HLLFGSKGIDLNQISQKL--ETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVN 564
H K DL + +K E + K++ E + +E K KEN I SL DE+N
Sbjct: 936 H---EEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEE--KAAKENQIHSLQDEMN 990
Query: 565 KNSLQTTEDQKWEHMLSEWNKEKIKLMNA 651
+ K + +L E N++ + + A
Sbjct: 991 SQDETIGKINKEKKLLEENNRQLVDDLQA 1019
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 32.3 bits (70), Expect = 0.73
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Frame = +1
Query: 202 KREYSKMGDEGFSKLLQQAEQLTTEIEGNEELPRV-ERSLGQVLEASQELYSRVIQSGAN 378
+ +YS + + KL A Q EI+ + +P E G L + + ++
Sbjct: 11111 QEQYSMVMKDVSKKL---ARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLKKGEENEKT 11167
Query: 379 DIQAHLLFGSKGIDLNQISQKLETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDE 558
+A L S D S TL SK+T + + S++ +KN+ + + + + E
Sbjct: 11168 KFEAKHLGSSSASD----SLAESTLRSKKTKKG--EVEKSELSIDMKNQDKTTLATTLLE 11221
Query: 559 VNKNSLQTTEDQKWEHMLSEWNKEKIKL 642
+ + E+ + EH+++ NKEK L
Sbjct: 11222 DDLAKTTSAEESEAEHLVALQNKEKTSL 11249
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 32.3 bits (70), Expect = 0.73
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Frame = +1
Query: 202 KREYSKMGDEGFSKLLQQAEQLTTEIEGNEELPRV-ERSLGQVLEASQELYSRVIQSGAN 378
+ +YS + + KL A Q EI+ + +P E G L + + ++
Sbjct: 11111 QEQYSMVMKDVSKKL---ARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLKKGEENEKT 11167
Query: 379 DIQAHLLFGSKGIDLNQISQKLETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDE 558
+A L S D S TL SK+T + + S++ +KN+ + + + + E
Sbjct: 11168 KFEAKHLGSSSASD----SLAESTLRSKKTKKG--EVEKSELSIDMKNQDKTTLATTLLE 11221
Query: 559 VNKNSLQTTEDQKWEHMLSEWNKEKIKL 642
+ + E+ + EH+++ NKEK L
Sbjct: 11222 DDLAKTTSAEESEAEHLVALQNKEKTSL 11249
>Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical
protein M162.8 protein.
Length = 312
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 676 LDLKRTPEPPSIADAPKKFGHSMLDNVE 759
LD K++ + PS+ D P + H ++DNV+
Sbjct: 9 LDSKKSSDAPSLFDMPNRVLHEIMDNVD 36
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 571 SLQTTEDQKWEHMLSEWNKEKIKLMNAMIGPSQNWLDLKRTPEPPSIADAPKKFGHSMLD 750
S T + WE +LS W ++++ ++ S + L ++ + S A P FG S
Sbjct: 569 SSMTNQKMSWESLLSHWVEKRVLPSKLVLSLSASTLSMQSLADVRSSAATP--FGQSAFV 626
Query: 751 NVEAAYARQVHQYNKYVXQGAKSRTAL 831
++ + +H + + + KS T +
Sbjct: 627 SMLRSKKGDIHSQQE-ICESLKSGTGV 652
>Z68748-5|CAA92956.2| 446|Caenorhabditis elegans Hypothetical
protein F13H10.5 protein.
Length = 446
Score = 29.5 bits (63), Expect = 5.2
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -2
Query: 746 NIECPNFLGASAILGGSGVRFKSSQFCEGPIIAF--MSLIFSLFHSESMCSHF*SSVVCR 573
N E P+ LG + G G F+ F +GPI F SL+ SL E C+H ++
Sbjct: 353 NNELPDVLG---VFLGYGPAFRVG-FRKGPIQLFDVYSLMCSLLSIEESCNHTPGRILRI 408
Query: 572 EFLLTSSIRDNI 537
+ +LTS R +I
Sbjct: 409 DDVLTSDARVSI 420
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 29.5 bits (63), Expect = 5.2
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 1/135 (0%)
Frame = +1
Query: 241 KLLQQAEQLTTEIEGNEELPRVERSLGQVLEASQELYSRVIQSGANDIQAHLLFGSKGID 420
K +Q E+L E+ G E L L QE Y+ Q+G LLF
Sbjct: 330 KAKKQREKLEAELAGLEGLKMDANGL-------QEAYNNAPQNGVRMRPPSLLFNGPIPQ 382
Query: 421 LNQISQKLETLSSKRTFEPLQPIADSDIESFLKNEKENAILSLIDEVNKNSLQTTEDQKW 600
L Q S + T SS RT P P + N L E+ + ED
Sbjct: 383 LLQGSSCVNTPSSPRTVPPPPPSLYPQVGCVC-----NQTYHLTQELENFNASQVEDVTM 437
Query: 601 EHMLSE-WNKEKIKL 642
E ++E N+ K+++
Sbjct: 438 EDTVNENGNRNKVEI 452
>U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 22 protein.
Length = 330
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 199 NEKQFNLNLIIICNSLVFICFFRF--RLVFHK-DAQSESIY*YCSI 71
N + F++N+III +F F F R++ H D + S+Y YC++
Sbjct: 50 NARLFHINVIIIFQVHLFGFFIHFFSRIILHGLDLYNYSVYDYCNM 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,562,187
Number of Sequences: 27780
Number of extensions: 350139
Number of successful extensions: 1067
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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