Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K14
         (1252 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           33   0.36 
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   4.4  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   7.7  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
 Frame = -1

Query: 532 PXXPGXPXXPL*XXXYPSPXPXXXAXXIXPPFTPKXSXYLXPPXP--XPXPTP 380
           P  P  P  P      PSP P      I PP  P    Y+ PP P   P PTP
Sbjct: 78  PYTPPTPRPPPTPPYVPSPPPYVPPY-IPPPTPPYVPPYIPPPTPPYVPPPTP 129


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = -1

Query: 532 PXXPGXPXXPL*XXXYPSPXPXXXAXXIXPPFTPKXSXYLXPPXPXPXPTP 380
           P  P  P  P      PSP          PP  P       PP P P P P
Sbjct: 322 PPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPP 372


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = -1

Query: 532 PXXPGXPXXPL*XXXYPSPXPXXXAXXIXPPFTPKXSXYLXPPXPXPXPTP 380
           P  P  P  P     +P P P        P F P  S Y  PP P P P P
Sbjct: 286 PPSPPPPPPPA----FPFPFPQLPPL---PHFPPLPSFYPSPPPPPPPPPP 329



 Score = 29.1 bits (62), Expect = 7.7
 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
 Frame = -1

Query: 532 PXXPGXPXXPL*XXXYPSPXPXXXAXXIXPPFTP---KXSXYLXPPXPXPXPT 383
           P  P  P  P     YPSP P        PP  P        L PP P P P+
Sbjct: 302 PQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYPSPPPS 354


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,745,393
Number of Sequences: 37544
Number of extensions: 70911
Number of successful extensions: 441
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3864364464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)