Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K06
(1174 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 32 0.76
04_04_0456 - 25355409-25355751,25356047-25356205,25356317-253565... 32 1.0
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 31 1.8
09_03_0206 + 13485420-13486439 31 1.8
02_05_0067 + 25557975-25558553 31 1.8
03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427 31 2.3
05_05_0006 + 21450739-21451434 30 3.1
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 30 4.1
07_01_0565 + 4188387-4190570 29 5.4
05_03_0428 + 13899295-13899669 29 5.4
02_03_0246 - 16807619-16808145,16808208-16808868 29 5.4
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 29 7.1
11_06_0087 - 19919224-19922304 29 9.4
11_01_0066 - 536281-537196,537397-537452 29 9.4
10_01_0090 + 1110035-1110350,1111032-1111039 29 9.4
05_05_0106 + 22435192-22435614,22436880-22436968,22437617-224378... 29 9.4
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 9.4
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 32.3 bits (70), Expect = 0.76
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 677 STARGCRRPSPHPPRASCT-TTPRSAAARSCTPTTG-PATSCTGATRAA 817
S A G R +P A TTP +A ARS TP++G P T + ++RAA
Sbjct: 54 SAAGGGRPTTPSSSSAGGRPTTPSAAFARSTTPSSGRPTTPSSASSRAA 102
>04_04_0456 -
25355409-25355751,25356047-25356205,25356317-25356513,
25356602-25356794,25357044-25358287
Length = 711
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 683 ARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGP 784
A G +P PP S T TPR+AAA + TP+T P
Sbjct: 237 APGNSTDAPAPPLNS-TATPRAAAAAAATPSTPP 269
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 701 PSPHPPRASCTTTPRSAAARSCTPTTGPA 787
PSP PPR TP +A+ SC PT PA
Sbjct: 71 PSPPPPR-----TPSAASTSSCRPTVAPA 94
>09_03_0206 + 13485420-13486439
Length = 339
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +1
Query: 661 AATRPEHRARLQTALASPAARFLHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVD 840
AA RP RL SPAA T + L H+ R C L RR V VVD
Sbjct: 75 AAVRPHRARRLSYGTLSPAAGSPCLPTTTHGTLLTHSCDRMCLLSRRRPTDPGCVVVVVD 134
Query: 841 Y 843
+
Sbjct: 135 F 135
>02_05_0067 + 25557975-25558553
Length = 192
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 383 CSPRCTARGRGGSRKHWCWRTCARRGSAPATACAP-WTGSTRA 508
C+P T R SR H C C S P AC+P TGST+A
Sbjct: 40 CNPSGTLRP---SRSHSCQDCCKAGRSYPTYACSPATTGSTKA 79
>03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427
Length = 143
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAARWRCEW 835
PS A R P H P A P SA A TP T P+ + W C W
Sbjct: 46 PSAANHIRIPPQHAP-AGAEVVPPSAGA---TPGTSPSEAEVVPPSTGGWSCVW 95
>05_05_0006 + 21450739-21451434
Length = 231
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 686 RGCRRP-SPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATR 811
R RP S PP +S +TT +AAA + T TTG + + +++
Sbjct: 58 RAVSRPKSSAPPSSSASTTTTAAAAFTSTSTTGASATTVDSSK 100
>05_06_0186 -
26207298-26208548,26208743-26208853,26209286-26209507,
26209623-26209658
Length = 539
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 689 GCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAA 817
G R P P PP+ S P A +C PAT+C A+ AA
Sbjct: 30 GNRTPHPPPPQGSRPRKPAPTPAAACR----PATACPPASDAA 68
>07_01_0565 + 4188387-4190570
Length = 727
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 689 GCRRPSPHPP--RASCTTTPRSAAARSCTPTTGPATSCTGATRAARW 823
G RRPSPH P R + R+ A S P ++S + R A W
Sbjct: 24 GHRRPSPHRPTVRGGVFSDLRATTAASSQPRPPSSSSSSAPFRLADW 70
>05_03_0428 + 13899295-13899669
Length = 124
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 413 GGSRKHWCWRTCARRGSAPATAC 481
GGSR+HW T +R +PA C
Sbjct: 78 GGSRRHWTCSTSSRSCRSPAPVC 100
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATS 793
P G RR + P + CTT P +A A + T GP ++
Sbjct: 116 PPCCCGRRRRAASPSASPCTTPPATARAPRTSSTPGPPSA 155
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 701 PSPHPPRASCTTTPRSAAARSCTP--TTGPATSCTGATRAARW 823
P PPR P +A P TT A + T AT A RW
Sbjct: 30 PRAAPPRIPSAPAPPAAGGSRYRPTTTTTAAATATSATAACRW 72
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +1
Query: 403 ARSRRLEEALVLEDLRASGFGPRDRLRPVDWEYACAAMEQLARLHALGFALQLQAPEQYE 582
ARS L + LR D DW A A + L LH +L + +Q+
Sbjct: 185 ARSSELSWLARMPSLRHLSLSSVDLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWR 244
Query: 583 RLARR 597
RL R
Sbjct: 245 RLLPR 249
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCT 799
P+T R P P P P A + TPTT P+T+ T
Sbjct: 245 PTTTRASPTPPPIPTATVRPPPPLPRATVTPTPTTPPSTATT 286
>10_01_0090 + 1110035-1110350,1111032-1111039
Length = 107
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 731 TTTPRSA--AARSCTPTTGPATSCT-GATRAARWR 826
+++P +A AAR TP T P T+C T + RWR
Sbjct: 71 SSSPAAARTAAREATPATLPTTACVYVCTMSTRWR 105
>05_05_0106 +
22435192-22435614,22436880-22436968,22437617-22437814,
22438475-22438679,22438749-22438916,22439095-22439262,
22439344-22439534,22440776-22440879,22441285-22441298
Length = 519
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 404 RGRGGSRKHWCWRTCARRGSAPATACAPWTG 496
RG GGS + RT + GSA A+A A WTG
Sbjct: 33 RGGGGSGR----RTPGKGGSASASAAAGWTG 59
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 701 PSPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAA 817
P+PHP A+ TP SA+A S AT+ T A R A
Sbjct: 21 PTPHPLAAAHPPTPTSASA-SAAMQMQAATTTTAARRLA 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,357,719
Number of Sequences: 37544
Number of extensions: 338277
Number of successful extensions: 2300
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2278
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3584899172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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