Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K06
         (1174 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          28   0.46 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.80 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   2.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   4.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   7.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   7.5  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   7.5  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 28.3 bits (60), Expect = 0.46
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +1

Query: 562 QAPEQ-YERLARRVEMRFDLE-STGAWSSTVELALAATRPEHRARLQTALAS 711
           QA  Q Y+ L R+ E R   + + G +    ELA  A +P+H  +LQT+LA+
Sbjct: 260 QANRQLYDDLVRQSETRLKEQVANGNFKQAAELA--ARQPQHFRQLQTSLAT 309


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 27.5 bits (58), Expect = 0.80
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 439 EDLRASGFGPRDRLRPVDWEYACAAMEQLA-RLHALGFALQLQAP 570
           E L   GFGP  ++R   WE A   ME+ A +L  +   L L+ P
Sbjct: 348 EQLEPHGFGPAYQIRKQQWEGARVPMERDANKLQFIVNELFLERP 392


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +2

Query: 692 CRRPSPH--PPRASCTTTP--RSAAARSCT-PTTGPATSCTGAT 808
           CR P P+  P  A   TTP  +SAA+ SC+  T    T+  GA+
Sbjct: 104 CRLPCPNLIPRPAEVPTTPEHKSAASSSCSLSTLETQTATAGAS 147


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 283  NSVYDTELLVYEELSKLYRALEEERGVAEPER 378
            +SV D+  L+  E + + R LEE    AEP+R
Sbjct: 999  SSVLDSMDLINGERASIARLLEEHEPEAEPQR 1030


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 707 PHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAA 817
           P PP  + T     + + SCT    P     GA+RAA
Sbjct: 78  PTPPTRNGTIFRYRSNSASCTGGAAPILESDGASRAA 114


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 9/39 (23%), Positives = 22/39 (56%)
 Frame = +1

Query: 10  DSYREFFRFPACXSEPDMTDTEERDRASSVLRDVMLRLH 126
           ++++ + + P C  +  +   E  +RAS + R+ ++R H
Sbjct: 336 NTFKGYLKCPLCNEQHPLHVCERFERASVINREEIVRKH 374


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +2

Query: 674 PSTARGCRRPSPHPPRA--SCTTTPRSAAARSCTPTTGPATSCT 799
           P + R  RR SP       SC + P    +RS  PT+ P +  T
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPT 294


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 591 RQPLVLLRCLQLQREAERVQPRQLLHRGARVLPVHGAQAVAGAEPRRAQ 445
           +QP    +  Q Q++ +R Q +Q  H+G R +P    Q     + R+ Q
Sbjct: 258 QQPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQQ 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,350
Number of Sequences: 2352
Number of extensions: 10707
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132434028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)