Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K06
(1174 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical pr... 39 0.008
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 39 0.008
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 33 0.39
U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical pr... 33 0.52
AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical ... 33 0.52
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 32 0.68
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 31 2.1
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 4.8
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 4.8
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 4.8
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 6.3
Z92827-1|CAB07326.1| 394|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 8.4
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 29 8.4
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 8.4
>Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.4 protein.
Length = 436
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVADVLYFVFTGSD 906
L+ Y + R LVH D + N++ ++G L +V+DY + G+P D++ +
Sbjct: 263 LNSYIGIERDVLVHGDLWSANILWEENEGKFLVSKVIDYQLIHMGNPAEDLVRLLLCTLS 322
Query: 907 XEFRARHXRPL 939
R H L
Sbjct: 323 GADRQAHWERL 333
>Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical
protein T16G1.5 protein.
Length = 434
Score = 40.3 bits (90), Expect = 0.003
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVADVLYFVFTGSD 906
++ Y ++++ LVH D N++ + + G + +V+DY + G+P D++ +
Sbjct: 264 VNKYAGIQKNVLVHGDLWAANILWKENDGNCVASKVIDYQLIHMGNPAEDLVRVFLSTLS 323
Query: 907 XEFRARHXRPL 939
R H L
Sbjct: 324 GADRQAHWEKL 334
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEV-RVVDYXKVQRGSPVAD-VLYFVFTG 900
L+ Y + R LVH D N++ + G V +V+DY + G+P D V F+ T
Sbjct: 266 LNKYVGIERDVLVHGDLWAANILWKEENDGKFSVSKVIDYQLIHMGNPAEDLVRVFLSTL 325
Query: 901 SDXEFRARHXRPL 939
S + +A R L
Sbjct: 326 SGADRQAHWERLL 338
>Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical
protein T16G1.3 protein.
Length = 389
Score = 38.7 bits (86), Expect = 0.008
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVAD-VLYFVFTGS 903
L++Y ++++ LVH D + N+M + ++ +++DY + G+P D V F+ T S
Sbjct: 226 LNNYLGIKKNVLVHGDLWSANIMWKENKDEFRVDKIIDYQSIHLGNPAEDLVRLFISTLS 285
Query: 904 DXE 912
E
Sbjct: 286 GSE 288
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 38.7 bits (86), Expect = 0.008
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEV-RVVDYXKVQRGSPVAD-VLYFVFTG 900
L+ Y ++R +VH D N++ + G V +V+DY + G+P D V F+ T
Sbjct: 265 LNKYIGIKRDVMVHGDLWAANILWKEKDEGTFSVSKVIDYQLIHMGNPAEDLVRLFLSTL 324
Query: 901 SDXEFRARHXRPL 939
S + +A R L
Sbjct: 325 SGADRQAHWERLL 337
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 33.1 bits (72), Expect = 0.39
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVADVL 882
L+ + + LVH D N++ + G +V+DY + G+P D++
Sbjct: 262 LNKVVGIHKDVLVHGDLWAANILWNENDGKFSASKVIDYQIIHMGNPAEDLV 313
>U50301-2|AAM29675.1| 362|Caenorhabditis elegans Hypothetical protein
F20D6.5 protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.52
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +1
Query: 751 RSTLVHADYRTCNLMHRRHQGGALEVR-VVDYXKVQRGSPVADV-LYFVFTGSDXEFRAR 924
+ L H DY NL++ +H G+ + R +VD+ V G+ D+ FV S + R
Sbjct: 228 QEVLCHGDYSFHNLLYEKHCDGSYKFRAIVDFQSVNWGNAAQDLSRLFVTAMSGKDRRDS 287
Query: 925 HXRPLXXXTXXVSXXAXRSXXPXTFXXAKXNXT 1023
R L + + + P T+ K + T
Sbjct: 288 EDRLLKIYYDELIKVSKGNVAPFTWEQLKQSYT 320
>AF067943-8|AAO12414.1| 428|Caenorhabditis elegans Hypothetical
protein F59B1.10 protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.52
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVAD---VLYFVFT 897
L+ ++++ L H D N + + G R+VDY G+P D +L T
Sbjct: 267 LNKVVGIKQNVLCHGDLWAANFLWTENNGVFCATRIVDYQMSHLGNPAEDLVRLLVSTIT 326
Query: 898 GSDXE 912
G+D +
Sbjct: 327 GADRQ 331
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 32.3 bits (70), Expect = 0.68
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 727 LHHYTALRRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVAD---VLYFVFT 897
L+ + + + H D N++ + GG + +V+DY + G+P D +L +
Sbjct: 259 LNKVVGIDQKVICHGDLWAANILWTQTDGGFIADKVLDYQESHMGNPAEDLVRLLVSTIS 318
Query: 898 GSDXEFRARH 927
G+D + H
Sbjct: 319 GADRQSHWEH 328
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 751 RSTLVHADYRTCNLMHRRHQGGALEVR-VVDYXKVQRGSPVADVLYFVF 894
+ST+VH D+R NL+ ++ ++V+ V+D+ G P++D+ F+F
Sbjct: 417 KSTIVHGDFRVDNLIIEENE---IKVKGVLDWELSTIGDPLSDLATFLF 462
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPA 787
P G R P P PPR TT ++ P PA
Sbjct: 988 PKVPEGARAPPPLPPRPKVKTTAVDETPQNLVPNNQPA 1025
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPA 787
P G R P P PPR TT ++ P PA
Sbjct: 988 PKVPEGARAPPPLPPRPKVKTTAVDETPQNLVPNNQPA 1025
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPA 787
P G R P P PPR TT ++ P PA
Sbjct: 988 PKVPEGARAPPPLPPRPKVKTTAVDETPQNLVPNNQPA 1025
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 603 LHAPRQPLVLLR-CLQLQREAERVQPRQLLHRGARVL 496
LH P + LLR CLQ + R+ + +LHRG+ L
Sbjct: 792 LHCPNGTVALLRHCLQQNTDEARMNLQFVLHRGSTFL 828
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 674 PSTARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATR 811
PSTA+ +P P PPR P + R PTT T+ T+
Sbjct: 235 PSTAKP--QPRPQPPRTRPYVAPSTTTQRYIEPTTQRPTTRRATTK 278
>Z92827-1|CAB07326.1| 394|Caenorhabditis elegans Hypothetical
protein C29F7.1 protein.
Length = 394
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 748 RRSTLVHADYRTCNLMHRRHQGGALEVRVVDYXKVQRGSPVADVLYFVFTGSDXEFRARH 927
R+S L H D + ++ + A ++D+ +GSP+ D+ + TG+ E R +
Sbjct: 248 RKSVLTHGDLWSPQILWDKDDNIA---GIIDWQVGHQGSPMEDLHRILSTGTSVENRNKL 304
Query: 928 XRPL 939
+PL
Sbjct: 305 TKPL 308
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 677 STARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCT 799
+TA P+P RA CT T SCT TT T+ T
Sbjct: 308 ATAPQSTNPTPVEVRALCTPTCMPQCLPSCTATTTTTTTQT 348
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 677 STARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAAR 820
ST P+P P TTT SAA + P P +S + RA R
Sbjct: 89 STMSTSPAPTPTPEPVVTTTTTTSAAPKRKEPIHAPESSSSEGQRAKR 136
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 677 STARGCRRPSPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAAR 820
ST P+P P TTT SAA + P P +S + RA R
Sbjct: 197 STMSTSPAPTPTPEPVVTTTTTTSAAPKRKEPIHAPESSSSEGQRAKR 244
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 704 SPHPPRASCTTTPRSAAARSCTPTTGPATSCTGATRAARWRCE 832
SP P +SC S+ A SC T P S +G R C+
Sbjct: 19 SPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGGF-GCRMNCQ 60
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 28.7 bits (61), Expect = 8.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -2
Query: 450 AQVLQHQCFLEPPRPRAVQRGEH 382
+Q+L+H+C + PRP ++ +H
Sbjct: 220 SQILEHRCLVSSPRPTDIEEWKH 242
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 701 PSPHPPRASCTTTPRSAAARSCTPTTGPATS 793
P+P PP ++ + TP +AA++ P+ P+T+
Sbjct: 835 PAPQPPSSAASLTPAPSAAQN-APSIAPSTT 864
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,011,249
Number of Sequences: 27780
Number of extensions: 222602
Number of successful extensions: 1114
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3203378606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -