Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K05
         (1241 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   3.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   4.6  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   6.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   8.0  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 148 EVKSTAKTQRISAHSHIKGLGLDENGVPIQMAAGLVGQESARE 276
           E+K ++  Q+ S      G G    G P   AAG VG  S  +
Sbjct: 308 EIKHSSLYQQTSRQHGTGGQGSSVGGAPTGAAAGSVGTASGEQ 350


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 334 LLAGPPGTGKTAIALAIAQELG 399
           ++ GP GTGK+AI   I   +G
Sbjct: 34  IILGPNGTGKSAIVAGIVLGMG 55


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 790 EYVPLPKGDVHKKKEVVQDVTLHD 861
           EY P P  D  ++K  +QDV L +
Sbjct: 371 EYPPTPTSDSSERKAHIQDVELKE 394


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = -2

Query: 865  PNRVRLHLVQLLSFCVHHLW 806
            P+ V+LH +++L+  VH+L+
Sbjct: 997  PSEVQLHFLEMLTKAVHNLF 1016


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,106,996
Number of Sequences: 2352
Number of extensions: 22035
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141835209
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)