Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_K05
(1241 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 378 e-105
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 203 2e-52
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 45 1e-04
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 44 2e-04
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 43 5e-04
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 40 0.004
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 40 0.004
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 40 0.004
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 40 0.004
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 39 0.006
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 39 0.006
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 39 0.006
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 39 0.006
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 39 0.008
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 38 0.011
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 38 0.015
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 38 0.019
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 38 0.019
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 38 0.019
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 37 0.026
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 36 0.059
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 36 0.079
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 36 0.079
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 36 0.079
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 36 0.079
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 36 0.079
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 36 0.079
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 36 0.079
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 36 0.079
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 35 0.10
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 35 0.10
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 35 0.10
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 35 0.10
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 35 0.14
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 34 0.18
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 34 0.18
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 34 0.18
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 34 0.18
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 34 0.18
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 34 0.24
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 34 0.24
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 33 0.32
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 33 0.32
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 33 0.55
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 33 0.55
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 33 0.55
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 31 1.3
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 31 1.3
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 31 1.7
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 31 1.7
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 31 2.2
U29535-1|AAK31459.1| 200|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 30 3.0
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 30 3.0
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 30 3.9
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 30 3.9
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 29 9.0
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 29 9.0
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical protein
C27H6.2 protein.
Length = 458
Score = 378 bits (930), Expect = e-105
Identities = 202/351 (57%), Positives = 253/351 (72%), Gaps = 7/351 (1%)
Frame = +1
Query: 142 IEEVKSTAKT-QRISAHSHIKGLGLD-ENGVPIQMAAGLVGQESAREAAGIVVDMIRSKK 315
IEEVK T K +RI+AHSH+KGLG+D E AAG VGQ AR AA IVVDMIR K
Sbjct: 20 IEEVKPTPKQIKRIAAHSHVKGLGIDTETQEAHYEAAGFVGQAPARTAASIVVDMIRLKC 79
Query: 316 MAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 495
MAGRA+L+AGPP TGKTAIALA++QELG VPF P+V SEV+S E+KKTEVLM +FRRAI
Sbjct: 80 MAGRAVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASEVFSNEVKKTEVLMRSFRRAI 139
Query: 496 GLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPTIYESL 675
GLR++ETK+VYEGEVTEL+PVE + +G GKT+SH+++ LKTAKG+KQLKLDP+IY+S+
Sbjct: 140 GLRVKETKDVYEGEVTELSPVEASDNSG-MGKTISHLVLSLKTAKGSKQLKLDPSIYDSI 198
Query: 676 QKEKVEVGDVIYIEANSGAVKRQGRSDTFATEFDLEAEEYVPLPKGDVHKKKEVVQDVTL 855
K++VEVGDVIYIEANSG VKR GR D +A+EFDLEA+E+VP+PKGDV K K++VQ+V+L
Sbjct: 199 LKQRVEVGDVIYIEANSGIVKRVGRCDVYASEFDLEADEFVPMPKGDVRKSKDIVQNVSL 258
Query: 856 HDLDCANARPQGGH-DIMSMMGXLMKPKKTEIXITSKRDX*VVTN--TXSGIAXLV-XVC 1023
HDLD ANARPQG D+ +++ LM PKKTE+ + + V N SG+A L+ V
Sbjct: 259 HDLDIANARPQGRQGDVSNIVSQLMTPKKTEVTDRLRSEINKVVNEYIESGVAELMPGVL 318
Query: 1024 YHG*GTMLDXE-XSHXYXXRGXXXTPMVXXATTXGXXNXXXXXXXSPXXSP 1173
+ MLD E ++ Y P+V AT G +P P
Sbjct: 319 FIDEVHMLDVECFTYLYRALESPMAPVVVFATNRGTTTVRGLGDKAPHGIP 369
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 203 bits (496), Expect = 2e-52
Identities = 111/249 (44%), Positives = 153/249 (61%), Gaps = 2/249 (0%)
Frame = +1
Query: 151 VKSTAKTQRISAHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMAGRA 330
VK K +R S HSHI GLGL++ ++ G+VGQ +AR+AAG++V MI+ K+AGRA
Sbjct: 9 VKDIVKVERTSVHSHITGLGLNDRLEAEYVSGGMVGQVAARQAAGLIVKMIQEGKIAGRA 68
Query: 331 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIR 510
LL+ G PG GKTAIA+AI++ELG PF +V SE+YS EI KTE L + FRRA+G++I+
Sbjct: 69 LLVTGEPGAGKTAIAIAISKELGEDTPFVSIVASEIYSNEINKTEALTQAFRRALGIQIK 128
Query: 511 ETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPTIYESLQKEKV 690
E EV EGEV L E + A G G V + ++T L + ++ KEKV
Sbjct: 129 EETEVLEGEVISL---EVDRSANGMGPKVGK--LTMRTTDMETIYDLGSKMVDACLKEKV 183
Query: 691 EVGDVIYIEANSGAVKRQGRSDTFATEFDLEAE--EYVPLPKGDVHKKKEVVQDVTLHDL 864
GDVI ++ SG V R GRS + ++D + V P G++ K++E V V LHD+
Sbjct: 184 MPGDVIQVDKASGRVTRLGRSFNRSHDYDAMGPKVKLVQCPDGEIQKRRETVHTVCLHDI 243
Query: 865 DCANARPQG 891
D N+R QG
Sbjct: 244 DVINSRTQG 252
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGL 501
+ +LL GPPG GKT +A A+A E G + F + G E+ + + ++E + F+RA
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETG--MNFISVKGPELLNMYVGESERAVRTVFQRA--- 623
Query: 502 RIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKL 651
R + ++ E+ L P + + G + V+ ++ + +G +++ L
Sbjct: 624 RDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQKVFL 673
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE 465
R ++ GPPG GKT A A+A EL +P + +E+ S +TE
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELA--IPMLQLAATELVSGVSGETE 284
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGL 501
+ +LL GPPG GKT +A A+A E G + F + G E+ + + ++E + F+RA
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETG--MNFFSVKGPELLNMYVGESERAVRTVFQRA--- 623
Query: 502 RIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKL 651
R + ++ E+ L P + + G + V+ ++ + +G +++ L
Sbjct: 624 RDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQKVFL 673
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE 465
R ++ GPPG GKT A A+A EL +P + +E+ S +TE
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELA--IPMLQLAATELVSGVSGETE 284
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 42.7 bits (96), Expect = 5e-04
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 244 AGLVG-QESAREAAGIVV---DMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVP 411
AGL G +E+ +EA + + + + + +LL GPPGTGK+ IA A+A E G
Sbjct: 121 AGLEGAKEALKEAVILPIKFPQLFTGNRKPWQGILLFGPPGTGKSYIAKAVATEAGEST- 179
Query: 412 FCPMVGSEVYSTEIKKTEVLMEN 480
F + S++ S + ++E L++N
Sbjct: 180 FFSISSSDLMSKWLGESEKLVKN 202
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 40.7 bits (91), Expect = 0.002
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI-GL 501
R +LL GPPGTGKT IA A+A E G+ F + G EV S ++E N R+A
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSF--FFLINGPEVMSKMSGESE---SNLRKAFEEC 299
Query: 502 RIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQL 645
+ ++ E+ + P + + VS ++ + KG L
Sbjct: 300 EKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNL 347
Score = 31.9 bits (69), Expect = 0.97
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQE 393
R +L GPPG GKT +A AIA E
Sbjct: 518 RGVLFYGPPGCGKTLLAKAIANE 540
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 435
+ +LL GPPGTGKT +A AIA E +VPF GSE
Sbjct: 235 KGVLLVGPPGTGKTLLARAIAGE--AQVPFFHTAGSE 269
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 286 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 393
+V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 286 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 393
+V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 286 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 393
+V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 435
R LL GPPG GKT +A A+A E + VPF M GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 435
R LL GPPG GKT +A A+A E + VPF M GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRA 492
R +LL GPPGTGKT IA A+A E G F + G E+ S ++E N R+A
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKMSGESE---SNLRKA 294
Score = 31.9 bits (69), Expect = 0.97
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQE 393
R +L GPPG GKT +A AIA E
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANE 539
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 39.1 bits (87), Expect = 0.006
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRA 492
R +LL GPPGTGKT IA A+A E G F + G E+ S ++E N R+A
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKMSGESE---SNLRKA 294
Score = 31.9 bits (69), Expect = 0.97
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQE 393
R +L GPPG GKT +A AIA E
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANE 539
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.006
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +1
Query: 274 EAAGIVVDMIRSKKMAGRAL-----LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
E V++ IR+ RAL +L G PG GKT IA A+A E K+ F + G E+
Sbjct: 472 ETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIAFLSVKGPEL 529
Query: 439 YSTEIKKTEVLMENFRRAIGLRIRETKE--VYEGEVTELTPVETENPAGGYGKTVSHVI 609
+ + ++E EN R+ R ++ ++ E+ L P N G G + ++
Sbjct: 530 LNKYVGQSE---ENLRKVFE-RAKQASPCVIFFDEIDSLAPNRGRN--GDSGGVIDRIV 582
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.006
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +1
Query: 274 EAAGIVVDMIRSKKMAGRAL-----LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
E V++ IR+ RAL +L G PG GKT IA A+A E K+ F + G E+
Sbjct: 472 ETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIAFLSVKGPEL 529
Query: 439 YSTEIKKTEVLMENFRRAIGLRIRETKE--VYEGEVTELTPVETENPAGGYGKTVSHVI 609
+ + ++E EN R+ R ++ ++ E+ L P N G G + ++
Sbjct: 530 LNKYVGQSE---ENLRKVFE-RAKQASPCVIFFDEIDSLAPNRGRN--GDSGGVIDRIV 582
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.006
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +1
Query: 274 EAAGIVVDMIRSKKMAGRAL-----LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
E V++ IR+ RAL +L G PG GKT IA A+A E K+ F + G E+
Sbjct: 472 ETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIAFLSVKGPEL 529
Query: 439 YSTEIKKTEVLMENFRRAIGLRIRETKE--VYEGEVTELTPVETENPAGGYGKTVSHVI 609
+ + ++E EN R+ R ++ ++ E+ L P N G G + ++
Sbjct: 530 LNKYVGQSE---ENLRKVFE-RAKQASPCVIFFDEIDSLAPNRGRN--GDSGGVIDRIV 582
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 38.7 bits (86), Expect = 0.008
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 211 LDENGVPIQMAAGLVGQESAREAAGIVV----DMIRSKKMAGRALLLAGPPGTGKTAIAL 378
LD GV + AG ++A E A I+ ++ + + + +LL GPPG GKT +A
Sbjct: 170 LDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLRQPVKGILLFGPPGNGKTLLAK 229
Query: 379 AIAQE 393
A+A E
Sbjct: 230 AVAGE 234
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 38.3 bits (85), Expect = 0.011
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI-KKTEVLMENFRRAIGL 501
+ +LL GPPGTGKT +A A+A T+ F + GSE+ I + ++ E F A
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAHH--TECTFIRVSGSELVQKFIGEGARMVRELFVMA--- 248
Query: 502 RIRETKEVYEGEVTELTPVETENPAGG---YGKTVSHVIIGLKTAKGTKQLKL 651
R ++ E+ + E +GG +T+ ++ L + TK +K+
Sbjct: 249 REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKV 301
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 37.9 bits (84), Expect = 0.015
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1
Query: 286 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIK 456
I V+++R K + G+ L GPPG GKT+IA +IA L + F VG EIK
Sbjct: 494 IAVNLLR-KSIGGKILCFHGPPGVGKTSIAKSIATALNREY-FRFSVGGMTDVAEIK 548
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 37.5 bits (83), Expect = 0.019
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI-KKTEVLMENFRRAIGL 501
+ +LL GPPGTGKT +A A+A T+ F + GSE+ I + ++ E F A
Sbjct: 189 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSELVQKFIGEGARMVRELFVMA--- 243
Query: 502 RIRETKEVYEGEVTELTPVETENPAGG---YGKTVSHVIIGLKTAKGTKQLKL 651
R ++ E+ + E GG +T+ ++ L + TK +K+
Sbjct: 244 REHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKV 296
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 37.5 bits (83), Expect = 0.019
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI-KKTEVLMENFRRAIGL 501
+ +LL GPPGTGKT +A A+A T+ F + GSE+ I + ++ E F A
Sbjct: 210 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSELVQKFIGEGARMVRELFVMA--- 264
Query: 502 RIRETKEVYEGEVTELTPVETENPAGG---YGKTVSHVIIGLKTAKGTKQLKL 651
R ++ E+ + E GG +T+ ++ L + TK +K+
Sbjct: 265 REHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKV 317
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 37.5 bits (83), Expect = 0.019
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 435
+ +L GPPGTGKT +A A A E VPF + GSE
Sbjct: 327 KGAILTGPPGTGKTLLAKATAGE--ANVPFITVSGSE 361
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 37.1 bits (82), Expect = 0.026
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 307 SKKMAGRALLLAGPPGTGKTAIALAIAQELGTK 405
+ + G L GPPG GKT+IA AIA+ +G K
Sbjct: 324 NNSVKGMILCFTGPPGIGKTSIAKAIAESMGRK 356
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.059
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKV 408
R +LL GPPGTGKT++ +AQ L ++
Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLSIRM 200
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.079
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
+ +LL GPPGTGKT A A+A T F ++GSE+
Sbjct: 212 KGVLLYGPPGTGKTLCARAVANR--TDACFIRVIGSEL 247
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 485
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 486 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 521
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 424 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 483
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 484 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 519
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 485
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 486 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 521
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 485
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 486 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 521
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 424 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 483
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 484 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 519
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 485
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 486 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 521
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 35.5 bits (78), Expect = 0.079
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 492
+ ++ GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA 485
Query: 493 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 609
+R ++ E+ L PV + + VS ++
Sbjct: 486 YAMR---PSIIFFDEIDGLAPVRSSKQDQIHASIVSTLL 521
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 35.1 bits (77), Expect = 0.10
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 435
R +L+ GPPG GKT +A A+A T F +VGSE
Sbjct: 196 RGVLMYGPPGCGKTMLAKAVA--ANTAASFIRVVGSE 230
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 35.1 bits (77), Expect = 0.10
Identities = 41/146 (28%), Positives = 66/146 (45%)
Frame = +1
Query: 292 VDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVL 471
V+ I+S G +++ GPPGTGKT +A+ I + P ++ + L
Sbjct: 811 VEAIKSGMQPGLTMVV-GPPGTGKTDVAVQIISNIYHNWP------NQRTLIVTHSNQAL 863
Query: 472 MENFRRAIGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKL 651
+ F + I L + E + G E +ETE YG+ V++V+ ++L+L
Sbjct: 864 NQLFEKIIALDVDERHLLRMGHGEE--ALETEKDFSRYGR-VNYVL--------KERLQL 912
Query: 652 DPTIYESLQKEKVEVGDVIYIEANSG 729
+ E L K VGDV Y N+G
Sbjct: 913 LNCV-EKLAKALKIVGDVAYTCENAG 937
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.10
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI-KKTEVLMENFRRA 492
+ LL GPPGTGKT +A A+A +L F +V S + I + ++ E F A
Sbjct: 177 KGCLLFGPPGTGKTLLARAVASQLDCN--FLKVVSSAIVDKYIGESARMIREMFNYA 231
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 35.1 bits (77), Expect = 0.10
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI-KKTEVLMENFRRA 492
+ LL GPPGTGKT +A A+A +L F +V S + I + ++ E F A
Sbjct: 185 KGCLLFGPPGTGKTLLARAVASQLDCN--FLKVVSSAIVDKYIGESARMIREMFNYA 239
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
+ +L+ GPPGTGKT +A A+A + TK F + G ++
Sbjct: 212 KGVLMYGPPGTGKTMMARAVAAQ--TKSTFLKLAGPQL 247
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVP 411
R +LL GPPGTGKT +A I + L + P
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVP 411
R +LL GPPGTGKT +A I + L + P
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVP 411
R +LL GPPGTGKT +A I + L + P
Sbjct: 265 RGILLFGPPGTGKTLMARQIGKMLNAREP 293
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 34.3 bits (75), Expect = 0.18
Identities = 25/87 (28%), Positives = 41/87 (47%)
Frame = +1
Query: 253 VGQESAREAAGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGS 432
V E A+ + +++D + K AGR L L GP G+GK+ I + + F V
Sbjct: 1041 VSFEYAQRSDKMILDGVSLKLPAGRTLALVGPSGSGKSTIISLLER-------FYHAVDG 1093
Query: 433 EVYSTEIKKTEVLMENFRRAIGLRIRE 513
EV E +V + + R ++ L +E
Sbjct: 1094 EVKIDEENVVDVNLHHLRESVSLVSQE 1120
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.18
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 331 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVL---MENFRRAIGL 501
LL GPPGTGKT LA A+++ + MV E+ +++ + +V+ + NF + GL
Sbjct: 65 LLFYGPPGTGKTTTVLAAARQMYSPTKMASMV-LELNASDERGIDVVRNTIVNFAQTKGL 123
Query: 502 RIRET 516
+ T
Sbjct: 124 QAFST 128
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.18
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 268 AREAAGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYST 447
+RE + ++I K+ A+ ++G PGTGKTA A+ + V EV +
Sbjct: 274 SREIEKFIREVIDPKRGESSAMYISGVPGTGKTATVRAVVNSMKKSKKCQKFVYVEVNAM 333
Query: 448 EIKKT 462
KKT
Sbjct: 334 IFKKT 338
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
+ ++L G PGTGKT +A A+A + T F +VGSE+
Sbjct: 223 KGVILYGCPGTGKTLLAKAVANQ--TSATFLRIVGSEL 258
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 34.3 bits (75), Expect = 0.18
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 244 AGLVGQESAREAAGIVV-------DMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGT 402
A + G E A++A +V D+ + + +LL GPPGTGKT I +A +
Sbjct: 316 ADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQ--C 373
Query: 403 KVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPVETENPAGG 582
K F + S + S + + E L+ L++ + E + + E+E+ +
Sbjct: 374 KATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSR 433
Query: 583 YGKTVSHV-IIGLKTAKGTKQLKLDPT 660
KT V + G+ TA + L L T
Sbjct: 434 RIKTEFLVQLDGVNTAPDERLLVLGAT 460
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTK 405
R +LL GPPG GKT +A A+A+ G +
Sbjct: 115 RGILLYGPPGCGKTLLAKAVARAAGCR 141
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTK 405
R +LL GPPG GKT +A A+A+ G +
Sbjct: 118 RGILLYGPPGCGKTLLAKAVARAAGCR 144
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.32
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 328 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRI 507
++ ++G PGTGKTA + + + LG V C + ST K L + ++ L
Sbjct: 197 SIYVSGQPGTGKTATTMRVLKSLGKSVRSCIV---NCASTNTK--SALFKTIFESLDLDG 251
Query: 508 RETKEVYEGEVTEL-TPV 558
+ +E++E V + TP+
Sbjct: 252 KPNEEIFEKHVKQFKTPL 269
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 33.5 bits (73), Expect = 0.32
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 331 LLLAGPPGTGKTAIALAIAQELGTK 405
LL GPPGTGKT+ ALA ++L K
Sbjct: 51 LLFYGPPGTGKTSAALAFCRQLFPK 75
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 32.7 bits (71), Expect = 0.55
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 304 RSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENF 483
+S ++ +LL GP G GKT + +A+ L + C + E +++
Sbjct: 135 QSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKL 194
Query: 484 RRAIGLRIRETKE--VYEGEVTELTPVETENPAGGY----GKTVSHVIIGLKTAKGT-KQ 642
+A G + + ++ V+ EV ++ E + Y G+ V H + LK +GT
Sbjct: 195 VQAAGGNVEKAQQGIVFLDEVDKIAAAH-EGHSAAYRDVSGEGVQHAL--LKLVEGTVVN 251
Query: 643 LKLDPTIYESLQKE-KVEVGDVIYIEANS 726
+K S Q + +++ D+++I + +
Sbjct: 252 VKSGKKGMGSQQDQVQIDTTDILFIASGA 280
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.55
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 304 RSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENF 483
+S ++ +LL GP G GKT + +A+ L + C + E +++
Sbjct: 251 QSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKL 310
Query: 484 RRAIGLRIRETKE--VYEGEVTELTPVETENPAGGY----GKTVSHVIIGLKTAKGT-KQ 642
+A G + + ++ V+ EV ++ E + Y G+ V H + LK +GT
Sbjct: 311 VQAAGGNVEKAQQGIVFLDEVDKIAAAH-EGHSAAYRDVSGEGVQHAL--LKLVEGTVVN 367
Query: 643 LKLDPTIYESLQKE-KVEVGDVIYIEANS 726
+K S Q + +++ D+++I + +
Sbjct: 368 VKSGKKGMGSQQDQVQIDTTDILFIASGA 396
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 32.7 bits (71), Expect = 0.55
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 271 REAAGIVVDMIRSKKMAG--RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
R I + +K+ G R ++ GPPGTGKT A ++AQ G + + + G ++
Sbjct: 323 RRLRDIAITTSNTKRNNGLFRNVMFYGPPGTGKTLFAKSLAQHSG--LDYAVLTGGDI 378
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 235 QMAAGLVGQESAREAAGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELG 399
Q L+ +E + +D + ++ + + LLL+GP G GK+ +A +A++ G
Sbjct: 301 QKVDDLLASLGEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAG 355
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 319 AGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 438
A + ++L G PGTGKT +A A+A T F GS++
Sbjct: 216 APKGVILYGEPGTGKTLLAKAVAN--STSATFIRATGSDL 253
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 331 LLLAGPPGTGKTAIALAIAQE-LGTKV 408
++L+GPPG GKT A+A+E LG KV
Sbjct: 46 IVLSGPPGCGKTTSVWALARELLGDKV 72
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 1.7
Identities = 45/169 (26%), Positives = 65/169 (38%), Gaps = 5/169 (2%)
Frame = +1
Query: 310 KKMAGRAL-LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFR 486
K++ R L L+ GPPGTGKT ++ I L K +V S E + +
Sbjct: 455 KQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGL 514
Query: 487 RAIGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPTIY 666
+ + L R ++E E V LT GG +I LK G + K D Y
Sbjct: 515 KVVRLCAR-SREHSETTVPYLTLQHQLKVMGG---AELQKLIQLKDEAGELEFK-DDLRY 569
Query: 667 ESLQK----EKVEVGDVIYIEANSGAVKRQGRSDTFATEFDLEAEEYVP 801
L++ E + DVI +S A R + T D + P
Sbjct: 570 MQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEP 618
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 31.1 bits (67), Expect = 1.7
Identities = 45/169 (26%), Positives = 65/169 (38%), Gaps = 5/169 (2%)
Frame = +1
Query: 310 KKMAGRAL-LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFR 486
K++ R L L+ GPPGTGKT ++ I L K +V S E + +
Sbjct: 455 KQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGL 514
Query: 487 RAIGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPTIY 666
+ + L R ++E E V LT GG +I LK G + K D Y
Sbjct: 515 KVVRLCAR-SREHSETTVPYLTLQHQLKVMGG---AELQKLIQLKDEAGELEFK-DDLRY 569
Query: 667 ESLQK----EKVEVGDVIYIEANSGAVKRQGRSDTFATEFDLEAEEYVP 801
L++ E + DVI +S A R + T D + P
Sbjct: 570 MQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEP 618
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 30.7 bits (66), Expect = 2.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKV 408
+A LL+G PG GKT A Q+LG ++
Sbjct: 341 KAALLSGSPGVGKTTCAYMACQQLGLQL 368
>U29535-1|AAK31459.1| 200|Caenorhabditis elegans Hypothetical
protein C25H3.12 protein.
Length = 200
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 466 VLMENFRRAIGLRIRETKEVYEGEVTELTPVETENPAGGY-GKTVSHVIIGLKTAKGTKQ 642
+++EN G RI++ E G+ + ENP G+ +T++ + GL G Q
Sbjct: 2 IILENEANEPGFRIQQRAESETGKKGRFGGILKENPIKGFSSETLTRPLTGLFRKTGKSQ 61
Query: 643 LKLD 654
K D
Sbjct: 62 RKTD 65
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKV 408
R L GPPGTGK++ A+A G V
Sbjct: 198 RGYLFYGPPGTGKSSFISALASHFGYSV 225
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 325 RALLLAGPPGTGKTAIALAIAQELGTKV 408
R L GPPGTGK++ A+A G V
Sbjct: 244 RGYLFYGPPGTGKSSFISALASHFGYSV 271
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 289 VVDMIRSKKMAGRALLLAGPPGTGKTAI 372
V+D + K AG+ L + GP G+GK+ I
Sbjct: 1019 VLDSVNLKVEAGKTLAIVGPSGSGKSTI 1046
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 289 VVDMIRSKKMAGRALLLAGPPGTGKTAI 372
V+D + K AG+ L + GP G+GK+ I
Sbjct: 1019 VLDSVNLKVEAGKTLAIVGPSGSGKSTI 1046
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 28.7 bits (61), Expect = 9.0
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +1
Query: 130 FNMKIEEVKSTA-KTQRISAHSHIKGLG---LDENGVPIQM-AAGLVGQESA----REAA 282
F +I EV++ +RI +S K LD N +P G V E R+
Sbjct: 1217 FVRQINEVETNVVSVERIDEYSKTKSEAEWRLDNNNLPSNWPTGGAVNIEDYSCRYRDEL 1276
Query: 283 GIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAI 384
+V+ I + G+ + + G G GK+++ALA+
Sbjct: 1277 DLVLKQISLNILPGQKVGVCGRTGAGKSSLALAL 1310
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 331 LLLAGPPGTGKTAIALAIAQELG 399
+L+ G PGTGK+ + +A++LG
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLG 34
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 316 MAGRALLLAGPPGTGKTAIALAIAQELGTKV 408
+ + +LL G PG GK++ +A+AQ G +
Sbjct: 1347 LISKPILLEGAPGCGKSSTVMALAQLTGNPI 1377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,424,758
Number of Sequences: 27780
Number of extensions: 505345
Number of successful extensions: 1344
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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