Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K04
         (1214 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          144   2e-34
11_01_0155 - 1287003-1287452                                          144   2e-34

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  144 bits (348), Expect = 2e-34
 Identities = 67/121 (55%), Positives = 85/121 (70%)
 Frame = +2

Query: 155 KRGHGXLRVNGRPLALVAPSLLQYKLQAPXLLLGKXKFSXVXISXXXXXXXXXXXXYAIX 334
           K G G ++VNG P+ L+ P +L+ K   P LL G+ +F  + +             YAI 
Sbjct: 29  KPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIR 88

Query: 335 QAISKALIAFYQQYVXAASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 514
           QAI+KAL+A+YQ+YV  ASKKE+KDI  +YDR+LLVADPRRCEPKKFGG GARAR+QKSY
Sbjct: 89  QAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSY 148

Query: 515 R 517
           R
Sbjct: 149 R 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  144 bits (348), Expect = 2e-34
 Identities = 67/121 (55%), Positives = 85/121 (70%)
 Frame = +2

Query: 155 KRGHGXLRVNGRPLALVAPSLLQYKLQAPXLLLGKXKFSXVXISXXXXXXXXXXXXYAIX 334
           K G G ++VNG P+ L+ P +L+ K   P LL G+ +F  + +             YAI 
Sbjct: 29  KPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIR 88

Query: 335 QAISKALIAFYQQYVXAASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 514
           QAI+KAL+A+YQ+YV  ASKKE+KDI  +YDR+LLVADPRRCEPKKFGG GARAR+QKSY
Sbjct: 89  QAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSY 148

Query: 515 R 517
           R
Sbjct: 149 R 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,866,090
Number of Sequences: 37544
Number of extensions: 361854
Number of successful extensions: 857
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3724688640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)