Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K04
         (1214 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical pr...   143   2e-34
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    29   8.8  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    29   8.8  

>Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical
           protein T01C3.6 protein.
          Length = 144

 Score =  143 bits (347), Expect = 2e-34
 Identities = 67/121 (55%), Positives = 85/121 (70%)
 Frame = +2

Query: 155 KRGHGXLRVNGRPLALVAPSLLQYKLQAPXLLLGKXKFSXVXISXXXXXXXXXXXXYAIX 334
           K+G G ++VNGRPL  + P +L+ KLQ P LL+GK +F  V I             YA+ 
Sbjct: 24  KKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVR 83

Query: 335 QAISKALIAFYQQYVXAASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSY 514
           QA++KAL+A+Y +YV   SK+E+K+I   YD+SLLVADPRR E KKFGGPGARARYQKSY
Sbjct: 84  QALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARYQKSY 143

Query: 515 R 517
           R
Sbjct: 144 R 144


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 8    PLLHGPSVIXPXGPLLSXWLLVAGGXPCAHPGRPSLRPFIXPPPQLRSXKRGHG 169
            P +H P    P    L+  +  +G  P    G P +RPF  PPPQ    +  +G
Sbjct: 984  PQIHPP---LPPPRFLAMPMQFSGHPPPVIMGPPIIRPFGAPPPQFIPIQSNYG 1034


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 8    PLLHGPSVIXPXGPLLSXWLLVAGGXPCAHPGRPSLRPFIXPPPQLRSXKRGHG 169
            P +H P    P    L+  +  +G  P    G P +RPF  PPPQ    +  +G
Sbjct: 984  PQIHPP---LPPPRFLAMPMQFSGHPPPVIMGPPIIRPFGAPPPQFIPIQSNYG 1034


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,193,193
Number of Sequences: 27780
Number of extensions: 274645
Number of successful extensions: 535
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)