Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K03
         (1222 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449...    34   0.20 
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490...    33   0.46 
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217           29   7.4  
04_01_0239 - 3126367-3127230,3127342-3128247                           29   9.8  

>01_01_0605 +
           4497308-4497472,4497719-4497904,4498898-4499003,
           4499062-4499216,4499341-4499424,4499498-4499589,
           4499729-4499837,4499944-4500030,4500153-4500245,
           4501144-4501341,4501481-4501632,4501724-4501874,
           4501975-4502073,4502159-4502326,4502624-4502702,
           4502870-4503000
          Length = 684

 Score = 34.3 bits (75), Expect = 0.20
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 160 PAXPXXPMSASFFWLHSASSKIKAANPGLKVTELAKKAGAIWRSM 294
           P  P   M+   ++  +    +K  NP L  TE+AKK G +W+ M
Sbjct: 596 PNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKM 640


>05_01_0562 +
           4907937-4907990,4908890-4909075,4909180-4909285,
           4909377-4909513,4909989-4910072,4910157-4910248,
           4910358-4910466,4910554-4910640,4910737-4910829,
           4911384-4911581,4911659-4911810,4911910-4912060,
           4912174-4912272,4912362-4912535,4912680-4912758,
           4912858-4912979
          Length = 640

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 160 PAXPXXPMSASFFWLHSASSKIKAANPGLKVTELAKKAGAIWRSM 294
           P  P   ++   ++  +  + +K +NP L  TE+AKK G  W+ M
Sbjct: 555 PNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKM 599


>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
          Length = 504

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
 Frame = +1

Query: 148 AXXXPAXPXXPMSASFFWLHSASSKIKAANPGLKVTELAKKAGAIWRSM--YXKSXWXXK 321
           A   P  P  P S+   +   A  ++    PG+  + L       W+ +    K  W  K
Sbjct: 407 AAADPNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGK 466

Query: 322 AAKAKXQY 345
           AA+A   Y
Sbjct: 467 AAEAMAAY 474


>04_01_0239 - 3126367-3127230,3127342-3128247
          Length = 589

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 375 WRRSRXEKKENPKTREESETGAKNKESETGRR 470
           W R+   K  N +    S    KNK  ETGRR
Sbjct: 156 WERAEAMKLANLENMRSSVKAEKNKRKETGRR 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,824,550
Number of Sequences: 37544
Number of extensions: 286608
Number of successful extensions: 592
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)