Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_K02
         (1237 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   7.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   7.9  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = +2

Query: 1088 PSXKKKXGXPFXPXKKPXXGXPGXKXGXXXPXXPXKKXGXPKKP 1219
            P  K + G P  P K    G PG       P  P  K   P  P
Sbjct: 543  PVVKGEKGLPGRPGKTGRDGPPGLTGEKGEPGLPVWKDRGPSGP 586


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = +1

Query: 817 PXWAVCTKPPXXPXGGP-YPXTXRP 888
           P W  CT+    P  GP Y  T +P
Sbjct: 466 PAWVYCTRYSDRPSSGPRYRRTKQP 490


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = +1

Query: 817 PXWAVCTKPPXXPXGGP-YPXTXRP 888
           P W  CT+    P  GP Y  T +P
Sbjct: 466 PAWVYCTRYSDRPSSGPRYRRTKQP 490


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,334
Number of Sequences: 2352
Number of extensions: 5317
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141017715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)