Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J24
         (1125 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001704-1|AAN71459.1|  699|Drosophila melanogaster RE64196p pro...   163   4e-40
AY075576-1|AAL68381.1|  400|Drosophila melanogaster SD05875p pro...   163   4e-40
AE014297-3693|AAN14033.1|  400|Drosophila melanogaster CG31110-P...   163   4e-40

>BT001704-1|AAN71459.1|  699|Drosophila melanogaster RE64196p
           protein.
          Length = 699

 Score =  163 bits (396), Expect = 4e-40
 Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
 Frame = +3

Query: 297 LLLVTANVGSIFEDPSVMLPIWTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDF 476
           + LVTANVGS+FEDP  +L +W SEFL  ++   P+F+ALHLQEVGGK YEKSM+YV++F
Sbjct: 13  VFLVTANVGSLFEDPERLLQLWLSEFLAKIAVAQPRFLALHLQEVGGKTYEKSMEYVQEF 72

Query: 477 VQRLCDCPELRLFDKIRIYLDEDFSSPXKFTALGNMYFAHSSLVDLKIWDXDLKAY---- 644
           ++ LCD PE+  F  + I++DEDF S   FTALG++YF H  +  LKIW+    ++    
Sbjct: 73  IRCLCDAPEMGDFTCVHIFMDEDFKSAEHFTALGSLYFVHKDVASLKIWNFLTHSWEESL 132

Query: 645 VDVVGKXIHXGNIXNASXXXXXXXPXXXXPXCXWXRKG 758
            DV  K I+ GNI   +       P    P C W RKG
Sbjct: 133 QDVKDKHIYSGNIETIATKEKSKFPQHFFPECKWSRKG 170


>AY075576-1|AAL68381.1|  400|Drosophila melanogaster SD05875p
           protein.
          Length = 400

 Score =  163 bits (396), Expect = 4e-40
 Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
 Frame = +3

Query: 297 LLLVTANVGSIFEDPSVMLPIWTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDF 476
           + LVTANVGS+FEDP  +L +W SEFL  ++   P+F+ALHLQEVGGK YEKSM+YV++F
Sbjct: 13  VFLVTANVGSLFEDPERLLQLWLSEFLAKIAVAQPRFLALHLQEVGGKTYEKSMEYVQEF 72

Query: 477 VQRLCDCPELRLFDKIRIYLDEDFSSPXKFTALGNMYFAHSSLVDLKIWDXDLKAY---- 644
           ++ LCD PE+  F  + I++DEDF S   FTALG++YF H  +  LKIW+    ++    
Sbjct: 73  IRCLCDAPEMGDFTCVHIFMDEDFKSAEHFTALGSLYFVHKDVASLKIWNFLTHSWEESL 132

Query: 645 VDVVGKXIHXGNIXNASXXXXXXXPXXXXPXCXWXRKG 758
            DV  K I+ GNI   +       P    P C W RKG
Sbjct: 133 QDVKDKHIYSGNIETIATKEKSKFPQHFFPECKWSRKG 170


>AE014297-3693|AAN14033.1|  400|Drosophila melanogaster CG31110-PA
           protein.
          Length = 400

 Score =  163 bits (396), Expect = 4e-40
 Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
 Frame = +3

Query: 297 LLLVTANVGSIFEDPSVMLPIWTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDF 476
           + LVTANVGS+FEDP  +L +W SEFL  ++   P+F+ALHLQEVGGK YEKSM+YV++F
Sbjct: 13  VFLVTANVGSLFEDPERLLQLWLSEFLAKIAVAQPRFLALHLQEVGGKTYEKSMEYVQEF 72

Query: 477 VQRLCDCPELRLFDKIRIYLDEDFSSPXKFTALGNMYFAHSSLVDLKIWDXDLKAY---- 644
           ++ LCD PE+  F  + I++DEDF S   FTALG++YF H  +  LKIW+    ++    
Sbjct: 73  IRCLCDAPEMGDFTCVHIFMDEDFKSAEHFTALGSLYFVHKDVASLKIWNFLTHSWEESL 132

Query: 645 VDVVGKXIHXGNIXNASXXXXXXXPXXXXPXCXWXRKG 758
            DV  K I+ GNI   +       P    P C W RKG
Sbjct: 133 QDVKDKHIYSGNIETIATKEKSKFPQHFFPECKWSRKG 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,126,013
Number of Sequences: 53049
Number of extensions: 548979
Number of successful extensions: 1378
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5882732352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)