Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_J24
         (1125 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.    195   7e-52
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   1.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   2.8  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score =  195 bits (475), Expect = 7e-52
 Identities = 91/161 (56%), Positives = 109/161 (67%)
 Frame = +3

Query: 276 MGSDKVPLLLVTANVGSIFEDPSVMLPIWTSEFLQAVSRMDPKFIALHLQEVGGKAYEKS 455
           M  + VP+LLVTANVGSIFE+PSVML IWT EFL  + R+DPKFIALH QEVGGK YE S
Sbjct: 1   MAGNSVPVLLVTANVGSIFEEPSVMLKIWTEEFLSTILRLDPKFIALHCQEVGGKNYEHS 60

Query: 456 MQYVKDFVQRLCDCPELRLFDKIRIYLDEDFSSPXKFTALGNMYFAHSSLVDLKIWDXDL 635
            + V+DFV+ L    ELRLFDKIR++LDED+SS   FTALGN YF H SL ++ +WD   
Sbjct: 61  TRQVEDFVRLLMSSEELRLFDKIRVFLDEDYSSAEHFTALGNFYFVHESLKNVLLWDFQE 120

Query: 636 KAYVDVVGKXIHXGNIXNASXXXXXXXPXXXXPXCXWXRKG 758
             ++ V GK +H GNI   +       P    P C W RKG
Sbjct: 121 CTFISVNGKEVHSGNIEAVTTKEKAKFPQEFFPECKWSRKG 161


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 387 RRPGGIPTSILAASLTDL 334
           R PGG+PTS++ A+ + +
Sbjct: 400 RGPGGVPTSVIQAATSSV 417


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 469  LTYCIDFSYALPPTSCRCKAMNFGSILETAWR-NSDVHIGSITDG-SSNIDPTLA 311
            LT  ++   ++PP   RC A+   S L+ +W+   + H   I  G   + +P LA
Sbjct: 1103 LTQTMEDVPSIPPEDVRCAALTSQS-LQVSWQPPPNTHSNGIIQGYKLHYEPILA 1156


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 469  LTYCIDFSYALPPTSCRCKAMNFGSILETAWR-NSDVHIGSITDG-SSNIDPTLA 311
            LT  ++   ++PP   RC A+   S L+ +W+   + H   I  G   + +P LA
Sbjct: 1099 LTQTMEDVPSIPPEDVRCAALTSQS-LQVSWQPPPNTHSNGIIQGYKLHYEPILA 1152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,308
Number of Sequences: 438
Number of extensions: 3554
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 37957815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)