Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J23
(1160 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 52 1e-07
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 30 0.53
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.93
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.93
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.93
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.2
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 29 1.6
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 29 1.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 2.2
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 2.2
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 3.8
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 5.0
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 27 6.6
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 6.6
SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3 sub... 27 6.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 6.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 8.7
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 52.4 bits (120), Expect = 1e-07
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Frame = +1
Query: 481 LQLAAELGK--TLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALRE-VNDS-RLRI 648
LQ+ + K +L E+N E + L++ + ++++ +E+ L K LRE DS +LR+
Sbjct: 481 LQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRK---LLREQTQDSQKLRL 537
Query: 649 Y-EQLELSIQDLERANHRLAVDHAAD-KKHIKSLCSNIDTVEAKCEXLQKTVDELNVQ 816
EQLEL QDL++A + ++D + IKSL S++ +A+C Q+ ++ELN Q
Sbjct: 538 LVEQLELERQDLKQAGENHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELNSQ 595
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 30.3 bits (65), Expect = 0.53
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +1
Query: 409 KKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERN--KELETALRQHQNVIEDQAQ 582
K + N+ + Q + S ML+ ++ +LE N + +ETA QHQ ++D A
Sbjct: 224 KAEAEANKIVSQKGMESLEIMLNSMKSENHQRMAMLEENHARVMETAELQHQAELQDFAS 283
Query: 583 EIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKK 729
IE K + E + E I++L N L + ++K
Sbjct: 284 NIE--QKANSLIMEYKNELQSAEEHFSHKIKELTSEN-ELKISRLQEEK 329
>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 575
Score = 29.5 bits (63), Expect = 0.93
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 479 ICNWRPNSGKPYSNATRNSRQPFASIKMLL----KIKHKKSNILQSKRLLCE 622
I +W+ S N + ++ F SI M+L K +++KSN+L + R LCE
Sbjct: 237 IPSWKSRSSDSKYNDHQFVKKNFFSIIMVLESLAKSQYRKSNVLAADRSLCE 288
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.5 bits (63), Expect = 0.93
Identities = 20/108 (18%), Positives = 54/108 (50%)
Frame = +1
Query: 382 TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQN 561
T+ + + + + GNEE++ + + + D +L ++ K + K LET+ +
Sbjct: 87 TLYNLKEFEELEAPGNEEVKAKEKRIKSPDVKDFKLPKDILKVKEKSEKPLETSQKVEIE 146
Query: 562 VIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 705
+E + E E + ++T +E +S++++ + E ++L ++ ++
Sbjct: 147 TVETKPGEPE-VKQETNLQKEKKESKVKLESKEEKISRNLRSSSRSIS 193
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.5 bits (63), Expect = 0.93
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Frame = +1
Query: 433 ELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTV 612
E + L + L+ L +L + +NKELE +++ N I+ +E+E ++
Sbjct: 1082 EADVKQLPKLKKELESLNDKDQLYQLQATKNKELEAKVKECLNNIKSLTKELENKEEKCQ 1141
Query: 613 ALREVNDSRL---RIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEX 783
L + + + I+E L L + DLE + D + +K + +N + K
Sbjct: 1142 NLSDASLKYIELQEIHENLLLKVSDLENYKKKYE-GLQLDLEGLKDVDTNFQELSKKHRD 1200
Query: 784 LQKTVDELNVQXXIYR 831
L + L Q Y+
Sbjct: 1201 LTFNHESLLRQSASYK 1216
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 514 LERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERAN 693
L R + L + Q I +QE++ L + LR+ ND++L ++LE ++ L +
Sbjct: 1245 LNRLQSLPVSNDQTDTPIISGSQEVQLLYESNSVLRKDNDAKLGKIQELEKEVEKLNASL 1304
Query: 694 HRLAVD 711
+ L +
Sbjct: 1305 NPLQTE 1310
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +1
Query: 487 LAAELGKTLLERNKELETALRQHQNVIEDQA-----QEIEYLTKQTVALREVNDSRLRIY 651
L LGK E +E ++A + + +E++ QE++ L KQ E+ +SRL+
Sbjct: 80 LLGTLGKFQQESEREQKSARKVKRAELEEKLAKRREQELQELEKQEKIEAEILESRLQEQ 139
Query: 652 EQLELSIQDLERANHRLAVDH 714
++ L +L+R + + +D+
Sbjct: 140 RKVALDELELDRNDLKKVLDN 160
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 427 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVI 567
N EL +D +R L+L +L ++E N +LET NV+
Sbjct: 148 NPELTAEDAENRVQAQMPLELKCQLADIVIENNSDLETLYENIHNVL 194
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 2.2
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = +1
Query: 442 QDDLTSRRCMLDDLQLAAELGKTLL-ERNKELETALRQHQNVIEDQAQEIEYLTKQTVAL 618
QD++ S +++ +E LL E NK L L H+N + ++ +Q + +
Sbjct: 992 QDEIASSSLRCENITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLV 1051
Query: 619 REVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 756
E YE+ L D +L D+ + ++ L I
Sbjct: 1052 TEDLRKTREDYEKELLRHADARSTLQKLREDYTKALEQVEDLNKEI 1097
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 448 DLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQN 561
+LT+ R L +LQL AE G+T+ E T + + +N
Sbjct: 220 ELTNLRICLHELQLNAEKGETIDESEDSKNTLVTEDEN 257
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 565 IEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 675
I+ + Q I+ + T L NDSR+RIY + S++
Sbjct: 447 IQTRTQMIDNIAGDTEMLVTTNDSRIRIYNLRDKSLE 483
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 517 ERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANH 696
E+ KE+ AL + + + +EIE L + L+ + + + + +I DLE N
Sbjct: 933 EKFKEVSQALAEANEKLNARDEEIERLKVDIIGLQNASLNMQSLKDSDNRTISDLESKNK 992
Query: 697 RL 702
L
Sbjct: 993 EL 994
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.6 bits (56), Expect = 6.6
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = +1
Query: 397 MDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQ 576
MD +++K E D+ +R + EL +L E+ E +L + E Q
Sbjct: 1 MDKLREKINA-ARAETDEAVARAEAAEAKLKEVELQLSLKEQEYE---SLSRKSEAAESQ 56
Query: 577 AQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 684
+E+E TKQ + D + EQL ++ LE
Sbjct: 57 LEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLE 92
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 6.6
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 493 AELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQ-LELS 669
AE T L R EL+ L Q ++ +++ K A + +S L + ++ +
Sbjct: 183 AERAATAL-REAELKHRLAQANADVDVANSKLDIALKNEAAWKAERESSLAHQKAVIDSA 241
Query: 670 IQDLERANHRLAVDHAADKK 729
+LERA H AV A KK
Sbjct: 242 RAELERARHEAAVADATYKK 261
>SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 804
Score = 26.6 bits (56), Expect = 6.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 107 LHEAHVRPLALRSRDLWTRGSHTSNNHSILTLNGRCKIDWSNFLV 241
L E HV P A+ R + T +HT + + KID NFL+
Sbjct: 449 LDEVHVVPAAMFRRVVTTIAAHTKLGLTATLVREDDKIDDLNFLI 493
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 511 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE 654
LL +NK + +H N + Q EYL T++++ +N+S + E
Sbjct: 769 LLVKNKISLDDVLKHHNKYKFGKQSTEYLKINTLSMKSLNNSSRKFLE 816
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 8.7
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 577 AQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 756
+++++ LT L + + + + + L S Q + H L DH + +L +
Sbjct: 758 SEDVKRLTANVETLTQDSKAMKQSFTSLVNSYQSISNLYHELRDDHVNMQSQNNTLLESE 817
Query: 757 DTVEAKCEXLQKTVDEL--NVQXXIYR 831
++ CE L + L NVQ +++
Sbjct: 818 SKLKTDCENLTQQNMTLIDNVQKLMHK 844
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,294,080
Number of Sequences: 5004
Number of extensions: 65046
Number of successful extensions: 224
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 621560784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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