Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J20
(1179 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 334 3e-91
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 334 4e-91
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 334 4e-91
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 334 4e-91
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 334 4e-91
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 332 1e-90
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 330 6e-90
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 164 6e-40
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 159 2e-38
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 142 2e-33
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 31 8.1
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (822), Expect = 3e-91
Identities = 157/272 (57%), Positives = 196/272 (72%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 195 HRKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY- 253
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 254 -EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 284
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (821), Expect = 4e-91
Identities = 157/272 (57%), Positives = 196/272 (72%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY- 253
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 254 -EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 284
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (821), Expect = 4e-91
Identities = 157/272 (57%), Positives = 196/272 (72%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY- 253
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 254 -EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 284
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 334 bits (821), Expect = 4e-91
Identities = 157/272 (57%), Positives = 196/272 (72%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY- 253
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 254 -EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 284
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 334 bits (821), Expect = 4e-91
Identities = 157/272 (57%), Positives = 196/272 (72%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY- 253
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 254 -EKKPKKEVKKERWNRPKMSLAQKKDRVAQKK 284
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 332 bits (816), Expect = 1e-90
Identities = 156/272 (57%), Positives = 195/272 (71%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 194
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 195 HRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY- 253
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 254 -EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 284
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 330 bits (811), Expect = 6e-90
Identities = 157/272 (57%), Positives = 196/272 (72%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 22 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 81
Query: 323 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 502
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 82 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 141
Query: 503 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 682
+D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 142 IDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 201
Query: 683 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHX 862
HR HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR +P +
Sbjct: 202 HRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENPVY- 259
Query: 863 XXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
RWN+ K++ A +K+ + + +
Sbjct: 260 -EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 290
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 164 bits (398), Expect = 6e-40
Identities = 75/125 (60%), Positives = 89/125 (71%)
Frame = +2
Query: 251 LIVRLSNKXVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 430
+IVR++N+ + CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 431 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 611 LNVPH 625
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 159 bits (386), Expect = 2e-38
Identities = 73/134 (54%), Positives = 99/134 (73%)
Frame = +2
Query: 557 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 736
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 737 QDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIRADPSHXXXXXXXXXXXXXRWNKRK 916
++DED++K+QFS+YIK VT D +E +Y KAH AIR +P + RWN+ K
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPK 118
Query: 917 LTXAXRKNXIXKXR 958
++ A +K+ + + +
Sbjct: 119 MSLAQKKDRVAQKK 132
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 142 bits (344), Expect = 2e-33
Identities = 63/84 (75%), Positives = 75/84 (89%)
Frame = +2
Query: 143 RSQVKFKRRRXGXTDXXARKRLVVQXKHKYNTPKYRLIVRLSNKXVTCQVAYSRIEGDHI 322
R QVKF+RRR G TD ARKRLV+Q K+KYNTPKYR+IVR++N+ + CQ+AY+RIEGD I
Sbjct: 15 RYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMI 74
Query: 323 VCAAYSHELPRYGVKVGLTNYAAA 394
VCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAA 98
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 806 IEAIYXKAHEAIRADPSHXXXXXXXXXXXXXRWNKRKLTXAXRKNXIXKXR 958
+E +Y KAH AIR +P + RWN+ K++ A +K+ + + +
Sbjct: 1 MEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,443,764
Number of Sequences: 237096
Number of extensions: 2329349
Number of successful extensions: 3766
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3756
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16513869000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -