Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J19
(1280 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.37
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.64
07_03_1136 + 24218601-24218734,24218769-24219906 32 1.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.5
07_01_0479 + 3606663-3607448 31 2.0
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 31 2.6
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 4.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 7.9
03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529... 29 7.9
03_01_0515 - 3864796-3865425 29 7.9
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.5 bits (73), Expect = 0.37
Identities = 30/121 (24%), Positives = 31/121 (25%), Gaps = 3/121 (2%)
Frame = -1
Query: 1124 PPXXXXGXXXXXXXXXGGGGXXXGKTPXXXXPXXXGXXPLXXGPXGXXXFXPGXXPXVXG 945
PP G GG P P G P P G P P
Sbjct: 1111 PPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVP-PPPPVGGLGGPPAPPPPAGF 1169
Query: 944 ETXXPPX---GGGXXPLPPXXXXGXXXXXXXXXGKGXPXXXPPFPGGXXXXXXGKNXPPX 774
PP GG P PP G G P P PGG G+ P
Sbjct: 1170 RGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAP 1229
Query: 773 P 771
P
Sbjct: 1230 P 1230
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.64
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 1154 PXXXPPXXPPXGXPPXPPPXXXXXXXXXXXPXGXXGG 1264
P PP PP PP PPP P G GG
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 1054 PXXXPPPPXXXXXKXXXPXXXXGGXPXXGXXXXPXGXPPXKXPXXXPPXXXP 1209
P PPPP P P P PP K P PP P
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPP 1210
PP G P P PP G PP PPP
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Frame = -2
Query: 1279 GXXXXXPPXPXGGXXXXXXRXXXXGXXXGG----PXGGXXXG--GXPXXXXXXPXGXXPP 1118
G PP P GG R G GG P GG G G P G
Sbjct: 126 GGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRA 185
Query: 1117 XXXGGXXXXXXXXPGGGG 1064
GG PGGGG
Sbjct: 186 PGGGGGGGGPGRAPGGGG 203
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +3
Query: 1011 PXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXG 1190
P P G PPPP P G P G G PP P G
Sbjct: 333 PPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGG 392
Query: 1191 PPXXXP 1208
P P
Sbjct: 393 PRARGP 398
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 2/95 (2%)
Frame = -2
Query: 1159 PXXXXXXPXGXXPPXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPFXXVXGPFXXALXXXX 980
P P PP PG PP PGPF + GP
Sbjct: 164 PQVVRPPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPF--MRGPPPMGPPQVR 221
Query: 979 XFXXGXPPXXX--GKPXXPPXXGXXXPXPXPXGPG 881
G PP G P P G P P P PG
Sbjct: 222 PGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPG 256
>02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = -3
Query: 1251 PXGXXXXXFXXXXXGGGX-GGXPXGGFXGGXXXGXXXXXXXGXPP 1120
P G F GGG GG P GGF GG G G P
Sbjct: 533 PGGMPGGGFPGGMPGGGFPGGMPGGGFPGGMPGGFPGGAMPGGVP 577
>02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPP 1210
P GG P PP PP PP PPP
Sbjct: 332 PTLVTGGTQENNATSDAPKLMPPPPPPPPPPPPPPP 367
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXP-PXXPPXGXPPXPPP 1210
PP G P P P P PP PP PPP
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPP 1174
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 1154 PXXXPPXXPPXGXPPXPPP 1210
P PP PP PP PPP
Sbjct: 108 PPPPPPPSPPPSAPPPPPP 126
Score = 29.1 bits (62), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 1154 PXXXPPXXPPXGXPPXPPP 1210
P PP PP PP PPP
Sbjct: 109 PPPPPPSPPPSAPPPPPPP 127
>03_06_0158 +
32052426-32052529,32052645-32052702,32052847-32052983,
32053824-32053899,32053965-32054017,32054415-32054896,
32055097-32055184,32055482-32055665,32056443-32056640,
32057351-32057534,32057982-32058109,32058236-32058317,
32058444-32058496,32058625-32058700,32059253-32059314
Length = 654
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +3
Query: 165 NYFVSIP*SIPGRMRPYRYKRFSDVPEGIINKLRQRAFHKYPDLE 299
++F + S+ G PY + + + +NK ++ A+ K+ +LE
Sbjct: 434 DFFALVGMSVDGSYAPYHANNLNQLQQRKMNKWKESAYQKFEELE 478
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 1154 PXXXPPXXPPXGXPPXPPP 1210
P PP PP PP PPP
Sbjct: 86 PPLPPPPPPPAASPPPPPP 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,991,683
Number of Sequences: 37544
Number of extensions: 589897
Number of successful extensions: 2492
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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