Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J19
(1280 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.082
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.14
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.14
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.33
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 1.3
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 3.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 3.1
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 3.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 3.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 4.1
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 5.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.4
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 5.4
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 29 9.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 9.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 9.4
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 9.4
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 9.4
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 35.5 bits (78), Expect = 0.082
Identities = 32/110 (29%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Frame = +3
Query: 885 GPXGXGXGXSXPXXGGXX---GFPXNXGGXPXXKXXXXXRAXX-KGPXTXXXGPGXXGGF 1052
GP G G G P G GFP GG + +GP P G
Sbjct: 1508 GPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMN 1567
Query: 1053 XXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPP--XGPP 1196
PPP PP GG P G PP PP GPP
Sbjct: 1568 GWRGGPPPPRGGSHCQGPPPLMGGPPP------RLGMPPPGPPPPNGGPP 1611
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +3
Query: 1065 PPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPP-XXXPPXGPPXXXPXXXXR 1223
PPP G PP GG P G PP P GP P R
Sbjct: 1469 PPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSPMMR 1522
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +3
Query: 1011 PXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPP-- 1184
P T G PPPPG PP G P PP PP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Query: 1185 XGPPXXXPXXXXRXXXXXXPPXG 1253
GPP P PP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = -2
Query: 1120 PXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPFXXVXGPFXXALXXXXXFXXGXPPXXXGK 941
P GG P GG PP PG + G G PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPP---PPPPPGGLPPITGG-----PPPPPPPGGLPPISGGP 758
Query: 940 PXXPPXXGXXXPXPXPXGPG 881
P PP G P P P PG
Sbjct: 759 PPPPPPPGGCPPPPPPPPPG 778
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGX---PPXPPPXXXXXXXXXXXPXGXXGG 1264
PP GG P P P PP PP PPP P G GG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 1195 GGPXGGXXXGGXPXXXXXXPXGXXPPXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPF 1025
GGP GG P P PP GG P GG PP PG F
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/108 (23%), Positives = 26/108 (24%), Gaps = 3/108 (2%)
Frame = +1
Query: 847 PFPXXXXXXXXXPXXXXGGRGXXPPPXGGXXVSPXTXGXXPGKKXXXPKG---PXKRGXK 1017
P P P GG PP GG P G P G P G
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 1018 PXKXGXXXXGVXPXXXPPPPXXXXXKXXXPXXXXGGXPXXGXXXXPXG 1161
P + PPPP P GG P G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/96 (26%), Positives = 25/96 (26%), Gaps = 3/96 (3%)
Frame = +1
Query: 919 PPXGGXXVSPXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPXX---XPPPPXXXX 1089
PP G P G P P P G P G P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 1090 XKXXXPXXXXGGXPXXGXXXXPXGXPPXKXPXXXPP 1197
K P G P PP K P P
Sbjct: 780 FKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPPXXXXXXXXXXXPXG 1252
PP GG P P PP P PP PPP P G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPP-PPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +3
Query: 1011 PXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPP-- 1184
P T G PPPPG PP G P PP PP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Query: 1185 XGPPXXXPXXXXRXXXXXXPPXG 1253
GPP P PP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = -2
Query: 1120 PXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPFXXVXGPFXXALXXXXXFXXGXPPXXXGK 941
P GG P GG PP PG + G G PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPP---PPPPPGGLPPITGG-----PPPPPPPGGLPPISGGP 758
Query: 940 PXXPPXXGXXXPXPXPXGPG 881
P PP G P P P PG
Sbjct: 759 PPPPPPPGGCPPPPPPPPPG 778
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGX---PPXPPPXXXXXXXXXXXPXGXXGG 1264
PP GG P P P PP PP PPP P G GG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 1195 GGPXGGXXXGGXPXXXXXXPXGXXPPXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPF 1025
GGP GG P P PP GG P GG PP PG F
Sbjct: 740 GGPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/108 (23%), Positives = 26/108 (24%), Gaps = 3/108 (2%)
Frame = +1
Query: 847 PFPXXXXXXXXXPXXXXGGRGXXPPPXGGXXVSPXTXGXXPGKKXXXPKG---PXKRGXK 1017
P P P GG PP GG P G P G P G
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 1018 PXKXGXXXXGVXPXXXPPPPXXXXXKXXXPXXXXGGXPXXGXXXXPXG 1161
P + PPPP P GG P G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/96 (26%), Positives = 25/96 (26%), Gaps = 3/96 (3%)
Frame = +1
Query: 919 PPXGGXXVSPXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPXX---XPPPPXXXX 1089
PP G P G P P P G P G P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 1090 XKXXXPXXXXGGXPXXGXXXXPXGXPPXKXPXXXPP 1197
K P G P PP K P P
Sbjct: 780 FKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPPXXXXXXXXXXXPXG 1252
PP GG P P PP P PP PPP P G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPP-PPPPPPPGGFKGGPPPPPPPG 791
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.14
Identities = 40/141 (28%), Positives = 42/141 (29%), Gaps = 5/141 (3%)
Frame = +3
Query: 789 FPAXXXXPPPGERXXXXWGALSXXPXXXXXXPGPXGXGXGXSXPXXGGXXGF-PXNXGGX 965
F A PP G +GA P P P G G P F P G
Sbjct: 331 FGAPPQGPPQGGPPQGSFGA---PPPQQFHAPSPQSFG-GPPPPVSSAPGNFAPPPQSGP 386
Query: 966 PXXKXXXXXRAXXKGPXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXPPXXXG----GXXP 1133
P A GPG GG+ PPPPG P G G P
Sbjct: 387 PGAF------APPPSAFGAPQGPGGPGGYG---PPPPGGPGAPGSYGPPQGGPGGFGPPP 437
Query: 1134 XGXXXXXXGXPPXXXPPXGPP 1196
G G PP PP G P
Sbjct: 438 PGGPGAY-GPPPTGFPPVGAP 457
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +3
Query: 1011 PXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPP-- 1184
P T G PPPPG PP G P PP PP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 338
Query: 1185 XGPPXXXPXXXXRXXXXXXPPXG 1253
GPP P PP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPG 361
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = -2
Query: 1120 PXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPFXXVXGPFXXALXXXXXFXXGXPPXXXGK 941
P GG P GG PP PG + G G PP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPP---PPPPPGGLPPITGG-----PPPPPPPGGLPPISGGP 341
Query: 940 PXXPPXXGXXXPXPXPXGPG 881
P PP G P P P PG
Sbjct: 342 PPPPPPPGGCPPPPPPPPPG 361
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGX---PPXPPPXXXXXXXXXXXPXGXXGG 1264
PP GG P P P PP PP PPP P G GG
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 1195 GGPXGGXXXGGXPXXXXXXPXGXXPPXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPF 1025
GGP GG P P PP GG P GG PP PG F
Sbjct: 323 GGPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/108 (23%), Positives = 26/108 (24%), Gaps = 3/108 (2%)
Frame = +1
Query: 847 PFPXXXXXXXXXPXXXXGGRGXXPPPXGGXXVSPXTXGXXPGKKXXXPKG---PXKRGXK 1017
P P P GG PP GG P G P G P G
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Query: 1018 PXKXGXXXXGVXPXXXPPPPXXXXXKXXXPXXXXGGXPXXGXXXXPXG 1161
P + PPPP P GG P G
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/96 (26%), Positives = 25/96 (26%), Gaps = 3/96 (3%)
Frame = +1
Query: 919 PPXGGXXVSPXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPXX---XPPPPXXXX 1089
PP G P G P P P G P G P PPPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Query: 1090 XKXXXPXXXXGGXPXXGXXXXPXGXPPXKXPXXXPP 1197
K P G P PP K P P
Sbjct: 363 FKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 398
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPPXXXXXXXXXXXPXG 1252
PP GG P P PP P PP PPP P G
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPP-PPPPPPPGGFKGGPPPPPPPG 374
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.33
Identities = 29/111 (26%), Positives = 29/111 (26%)
Frame = +3
Query: 861 PXXXXXXPGPXGXGXGXSXPXXGGXXGFPXNXGGXPXXKXXXXXRAXXKGPXTXXXGPGX 1040
P PGP G P G G P N G A GPG
Sbjct: 194 PAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGP 253
Query: 1041 XGGFXXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXGP 1193
G P PPG P G P G G P P GP
Sbjct: 254 AG--PPGPPGPPGQDGSGGAAQPGPPGPPGPPG----NDGQPGGPGQPGGP 298
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/110 (24%), Positives = 28/110 (25%), Gaps = 6/110 (5%)
Frame = +1
Query: 898 GGRGXXPPPXGGXXVS------PXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPX 1059
G G PPP G S P P P P G P G+ P
Sbjct: 239 GRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP 298
Query: 1060 XXPPPPXXXXXKXXXPXXXXGGXPXXGXXXXPXGXPPXKXPXXXPPXXXP 1209
PPPP P P G PP P P P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Score = 30.3 bits (65), Expect = 3.1
Identities = 33/148 (22%), Positives = 39/148 (26%), Gaps = 1/148 (0%)
Frame = +1
Query: 754 LXSRSXGXGGXFFPXXXXXXPPGKGGXXXGXPFPXXXXXXXXXPXXXXGGRGXXPPPXGG 933
+ + + G G P G G P P P G PPP
Sbjct: 233 IAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPS 292
Query: 934 XXVSPXTXGXXPGKKXXXPKGP-XKRGXKPXKXGXXXXGVXPXXXPPPPXXXXXKXXXPX 1110
+ P PG+ P P P + G G P PPPP P
Sbjct: 293 SGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP---PPPPPGMRYPGGMPP 349
Query: 1111 XXXGGXPXXGXXXXPXGXPPXKXPXXXP 1194
P G P PP P P
Sbjct: 350 PPPPRYPSAGPGMYP--PPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.3
Identities = 27/110 (24%), Positives = 28/110 (25%), Gaps = 6/110 (5%)
Frame = +1
Query: 898 GGRGXXPPPXGGXXVS------PXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPX 1059
G G PPP G S P P P P G P G+ P
Sbjct: 249 GRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP 308
Query: 1060 XXPPPPXXXXXKXXXPXXXXGGXPXXGXXXXPXGXPPXKXPXXXPPXXXP 1209
PPPP P P G PP P P P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Score = 30.3 bits (65), Expect = 3.1
Identities = 33/148 (22%), Positives = 39/148 (26%), Gaps = 1/148 (0%)
Frame = +1
Query: 754 LXSRSXGXGGXFFPXXXXXXPPGKGGXXXGXPFPXXXXXXXXXPXXXXGGRGXXPPPXGG 933
+ + + G G P G G P P P G PPP
Sbjct: 243 IAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPS 302
Query: 934 XXVSPXTXGXXPGKKXXXPKGP-XKRGXKPXKXGXXXXGVXPXXXPPPPXXXXXKXXXPX 1110
+ P PG+ P P P + G G P PPPP P
Sbjct: 303 SGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP---PPPPPGMRYPGGMPP 359
Query: 1111 XXXGGXPXXGXXXXPXGXPPXKXPXXXP 1194
P G P PP P P
Sbjct: 360 PPPPRYPSAGPGMYP--PPPPSRPPAPP 385
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/66 (28%), Positives = 21/66 (31%)
Frame = +3
Query: 882 PGPXGXGXGXSXPXXGGXXGFPXNXGGXPXXKXXXXXRAXXKGPXTXXXGPGXXGGFXXX 1061
PGP G P G G P + A GP PG GG+
Sbjct: 223 PGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPG--GGYGVG 280
Query: 1062 XPPPPG 1079
P PPG
Sbjct: 281 PPGPPG 286
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.5 bits (68), Expect = 1.3
Identities = 31/121 (25%), Positives = 32/121 (26%)
Frame = -2
Query: 1138 PXGXXPPXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPFXXVXGPFXXALXXXXXFXXGXP 959
P G P G P GGG PP PGP P G P
Sbjct: 182 PAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGP---AGNPGTDGAPG----NPGAP 234
Query: 958 PXXXGKPXXPPXXGXXXPXPXPXGPGXXXXXXGXXERAPXXXNXLSPGGGXXXXAGKTXX 779
P P G P P P GP G E P + G AG
Sbjct: 235 GQVTETPGTPGPAGAAGP-PGPPGPAGNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPGA 293
Query: 778 P 776
P
Sbjct: 294 P 294
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +3
Query: 1029 GPGXXGGFXXXXPP----PPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXGPP 1196
GPG GG P P G PP GG P G G PP GPP
Sbjct: 126 GPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGG-PPGHGGMGGPP 184
Query: 1197 -XXXPXXXXRXXXXXXPPXGXGG 1262
PP G GG
Sbjct: 185 GHGGQGGPPGHGGMGGPPPGQGG 207
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +3
Query: 1029 GPGXXGGFXXXXPP----PPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXGPP 1196
GPG GG P P G PP GG P G G PP GPP
Sbjct: 406 GPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGG-PPGHGGMGGPP 464
Query: 1197 -XXXPXXXXRXXXXXXPPXGXGG 1262
PP G GG
Sbjct: 465 GHGGQGGPPGHGGMGGPPPGQGG 487
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/104 (24%), Positives = 25/104 (24%)
Frame = +3
Query: 882 PGPXGXGXGXSXPXXGGXXGFPXNXGGXPXXKXXXXXRAXXKGPXTXXXGPGXXGGFXXX 1061
PGP G G P G G P G P A GP PG G
Sbjct: 164 PGPAGPPGGPGPPGPPGPEGAPGEDGNTP--SRGGVGEAGPPGPPGTSGNPGTDGAPGNP 221
Query: 1062 XPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXGP 1193
P P G P G P GP
Sbjct: 222 GAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGASEPGPAGP 265
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 1005 KGPXTXXXGPGXXGGFXXXXPP-PPGXXXXXXXXP-PXXXGGXXPXGXXXXXXGXPPXXX 1178
KGP PG GG PP PPG P G G G P
Sbjct: 200 KGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAG 259
Query: 1179 PPXGPP 1196
PP GPP
Sbjct: 260 PP-GPP 264
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 1032 PGXXGGFXXXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPP 1184
PG F PPPPG PP G P G G P PP
Sbjct: 696 PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQG--IPPMGFDPNKPPP 744
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 4.1
Identities = 25/106 (23%), Positives = 27/106 (25%), Gaps = 4/106 (3%)
Frame = +1
Query: 904 RGXXPPPXGGXXVSPXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPXX--XPPPP 1077
+G P G P G P + P P P G PPPP
Sbjct: 244 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Query: 1078 XXXXXKXXXPXXXXGGXPXXGXXXXPXGXPPXK--XPXXXPPXXXP 1209
P GG P P P K P PP P
Sbjct: 304 RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 4.1
Identities = 25/106 (23%), Positives = 27/106 (25%), Gaps = 4/106 (3%)
Frame = +1
Query: 904 RGXXPPPXGGXXVSPXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPXX--XPPPP 1077
+G P G P G P + P P P G PPPP
Sbjct: 265 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Query: 1078 XXXXXKXXXPXXXXGGXPXXGXXXXPXGXPPXK--XPXXXPPXXXP 1209
P GG P P P K P PP P
Sbjct: 325 RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 4.1
Identities = 25/106 (23%), Positives = 27/106 (25%), Gaps = 4/106 (3%)
Frame = +1
Query: 904 RGXXPPPXGGXXVSPXTXGXXPGKKXXXPKGPXKRGXKPXKXGXXXXGVXPXX--XPPPP 1077
+G P G P G P + P P P G PPPP
Sbjct: 250 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Query: 1078 XXXXXKXXXPXXXXGGXPXXGXXXXPXGXPPXK--XPXXXPPXXXP 1209
P GG P P P K P PP P
Sbjct: 310 RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical protein
F57B1.4 protein.
Length = 317
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 1005 KGPXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXPPXXXGGXXP--XGXXXXXXGXPPXXX 1178
KGP PG GG PP P P P G G P
Sbjct: 188 KGPSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAG 247
Query: 1179 PPXGPP 1196
PP GPP
Sbjct: 248 PP-GPP 252
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 29.5 bits (63), Expect = 5.4
Identities = 29/107 (27%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Frame = +3
Query: 813 PPGERXXXXWGALSXXPXXXXXXPG-PXGXGXGXSXPXXGGXXG-FPXNXGGXPXXKXXX 986
PPG + G+ P PG P G S P G G FP GG
Sbjct: 243 PPGPQVP---GSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFP 299
Query: 987 XXRAXXKGPXTXXX------GPGXXGGFXXXXPPPPGXXXXXXXXPP 1109
GP GPG GG+ P PG PP
Sbjct: 300 PGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPGMQGGYPGGPP 346
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 1106 PXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPP 1210
P GGG P PP P G P PPP
Sbjct: 21 PMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPP 55
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen protein
143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = +3
Query: 882 PGPXGXGXGXSXPXXGGXXGFPXNXG-GXPXXK--XXXXXRAXXKGPXTXXXGPGXXGGF 1052
PGP G P G G P N G G + R +GP PG GG
Sbjct: 169 PGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGTPGASGRPGPQGPAGAPGQPGRSGGA 228
Query: 1053 XXXXPP-PPG 1079
P PPG
Sbjct: 229 GTPGPQGPPG 238
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein
F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 7.1
Identities = 35/143 (24%), Positives = 36/143 (25%), Gaps = 3/143 (2%)
Frame = -2
Query: 1189 PXGGXXXGGXPXXXXXXPXGXXPPXXXGGXXXXXXXX-PGGGGXXXXKPPXXPGPFXXVX 1013
P GG GG P PP G PG G GP V
Sbjct: 89 PQGGGGGGGGQCSTCCRPG---PPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVV 145
Query: 1012 GPFXXALXXXXXFXXGXP--PXXXGKPXXPPXXGXXXPXPXPXGPGXXXXXXGXXERAPX 839
G P P G+P P G P P P GP G RA
Sbjct: 146 PTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGA 205
Query: 838 XXNXLSPGGGXXXXAGKTXXPXP 770
PG G P P
Sbjct: 206 PG---QPGNDAHGYGGGVGAPGP 225
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical protein
C15A11.1 protein.
Length = 303
Score = 29.1 bits (62), Expect = 7.1
Identities = 27/105 (25%), Positives = 27/105 (25%)
Frame = -2
Query: 1195 GGPXGGXXXGGXPXXXXXXPXGXXPPXXXGGXXXXXXXXPGGGGXXXXKPPXXPGPFXXV 1016
G P G P G P G PG G P PGP
Sbjct: 133 GAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPGPNGQ-PGAAGTTSTNEPGSPGPAGP- 190
Query: 1015 XGPFXXALXXXXXFXXGXPPXXXGKPXXPPXXGXXXPXPXPXGPG 881
GP A PP G P P G P GPG
Sbjct: 191 PGPAGPA--GEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGGPG 233
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPP 1210
PP G P P PP G PP PPP
Sbjct: 521 PPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 1103 PPXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPP 1210
PP GG P PP P G PP PPP
Sbjct: 86 PPPMFAGGIPPPPPMMG--GIPPPPPMFGAPPPPPP 119
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 961 PPXXXGKPXXPPXXGXXXPXPXPXGPG 881
PP G P PP G P P P G G
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 1209 GGGXGGXPXGGFXGGXXXGXXXXXXXGXPPP 1117
GGG GG GG+ G G PPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP 305
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 1209 GGGXGGXPXGGFXGGXXXGXXXXXXXGXPPP 1117
GGG GG GG+ G G PPP
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP 305
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 1106 PXXXGGGXPXXXXXXXPXXXPPXXPPXGXPPXPPP 1210
P P P PP PP PP PPP
Sbjct: 334 PSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPP 368
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -3
Query: 1209 GGGXGGXPXGGFXGGXXXGXXXXXXXG---XPPPXXXGG 1102
GGG GG GG GG G G PPP GG
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGG 63
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 196 GILQGIETK*FNNYLHANGSGNKRKNDE 113
GI+ GI+TK LH NGSGN+++ +E
Sbjct: 45 GIIAGIDTKPHLTGLH-NGSGNRKRVEE 71
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein 14
protein.
Length = 345
Score = 28.7 bits (61), Expect = 9.4
Identities = 27/107 (25%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Frame = +3
Query: 888 PXGXGXGXSXPXXGGXXGFPXNXG--GXPXXKXXXXXRAXXKGPXT--XXXGPGXXGGFX 1055
P G G P G G P N G G P + P PG G +
Sbjct: 205 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYK 264
Query: 1056 XXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXGPP 1196
P PP G P G G P P GPP
Sbjct: 265 TEVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLP--GPP 309
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 9.4
Identities = 27/107 (25%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Frame = +3
Query: 888 PXGXGXGXSXPXXGGXXGFPXNXG--GXPXXKXXXXXRAXXKGPXT--XXXGPGXXGGFX 1055
P G G P G G P N G G P + P PG G +
Sbjct: 186 PPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYK 245
Query: 1056 XXXPPPPGXXXXXXXXPPXXXGGXXPXGXXXXXXGXPPXXXPPXGPP 1196
P PP G P G G P P GPP
Sbjct: 246 TEVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLP--GPP 290
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 28.7 bits (61), Expect = 9.4
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 1005 KGPXTXXXGPGXXGGFXXXXPPPPGXXXXXXXXP--PXXXGGXXPXGXXXXXXGXPPXXX 1178
KGP PG GG PP P P G G G P
Sbjct: 222 KGPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAG 281
Query: 1179 PPXGPP 1196
PP GPP
Sbjct: 282 PP-GPP 286
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen protein
142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 9.4
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +3
Query: 882 PGPXGXGXGXSXPXXGGXXGFPXNXG-GXPXXKXXXXX--RAXXKGPXTXXXGPGXXGGF 1052
PGP G P G G P N G G + R GP PG GG
Sbjct: 169 PGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGA 228
Query: 1053 XXXXPP-PPG 1079
P PPG
Sbjct: 229 GSPGPQGPPG 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,173,934
Number of Sequences: 27780
Number of extensions: 501956
Number of successful extensions: 2251
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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