Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_J14
(1212 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 465 e-131
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 465 e-131
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 465 e-131
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 463 e-131
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 438 e-123
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 438 e-123
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 433 e-122
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 431 e-121
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 430 e-121
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 430 e-121
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 425 e-119
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 405 e-113
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 398 e-111
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 396 e-110
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 370 e-102
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 355 5e-98
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 222 5e-58
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 219 2e-57
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 219 3e-57
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 219 3e-57
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 218 6e-57
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 217 1e-56
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 185 5e-47
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 185 5e-47
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 122 4e-28
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 122 4e-28
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.94
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 6.6
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 6.6
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 6.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin MEC-12
protein.
Length = 450
Score = 465 bits (1147), Expect = e-131
Identities = 226/315 (71%), Positives = 244/315 (77%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY CF P
Sbjct: 241 SLRFDG--ALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEP 298
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 299 HNQMVKCDPRHGKYM 313
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 465 bits (1147), Expect = e-131
Identities = 226/315 (71%), Positives = 244/315 (77%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY CF P
Sbjct: 241 SLRFDG--ALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEP 298
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 299 HNQMVKCDPRHGKYM 313
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 465 bits (1147), Expect = e-131
Identities = 226/315 (71%), Positives = 244/315 (77%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY CF P
Sbjct: 241 SLRFDG--ALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEP 298
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 299 HNQMVKCDPRHGKYM 313
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 463 bits (1142), Expect = e-131
Identities = 225/314 (71%), Positives = 243/314 (77%), Gaps = 4/314 (1%)
Frame = +1
Query: 139 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 318
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 319 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 678
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVSTAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 679 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 858
VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITAS
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITAS 240
Query: 859 LRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXPX 1026
LR + L PYP P KAY CF P
Sbjct: 241 LRFDG--ALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPH 298
Query: 1027 NXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 299 NQMVKCDPRHGKYM 312
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 438 bits (1079), Expect = e-123
Identities = 213/315 (67%), Positives = 239/315 (75%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY + +CF P
Sbjct: 239 SLRFDG--ALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEP 296
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 297 ANQMVKCDPRHGKYM 311
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 438 bits (1079), Expect = e-123
Identities = 213/315 (67%), Positives = 239/315 (75%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY + +CF P
Sbjct: 239 SLRFDG--ALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEP 296
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 297 ANQMVKCDPRHGKYM 311
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical protein
F26E4.8 protein.
Length = 449
Score = 433 bits (1068), Expect = e-122
Identities = 210/315 (66%), Positives = 238/315 (75%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY + +CF P
Sbjct: 239 SLRFDG--ALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEP 296
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 297 ANQMVKCDPRHGKYM 311
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 431 bits (1063), Expect = e-121
Identities = 209/315 (66%), Positives = 237/315 (75%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY + +CF P
Sbjct: 239 SLRFDG--ALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEP 296
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 297 ANQMVKCDPRHGKYM 311
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 430 bits (1060), Expect = e-121
Identities = 208/315 (66%), Positives = 237/315 (75%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY + +CF P
Sbjct: 239 SLRFDG--ALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEP 296
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 297 ANQMVKCDPRNGKYM 311
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 430 bits (1060), Expect = e-121
Identities = 208/315 (66%), Positives = 237/315 (75%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY + +CF P
Sbjct: 239 SLRFDG--ALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEP 296
Query: 1024 XNXMXKXXPRXGXXM 1068
N M K PR G M
Sbjct: 297 ANQMVKCDPRNGKYM 311
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 425 bits (1047), Expect = e-119
Identities = 205/316 (64%), Positives = 232/316 (73%), Gaps = 4/316 (1%)
Frame = +1
Query: 133 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 312
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 313 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 492
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 493 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 672
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 673 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 852
++VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLD+ RPTYTNLNRLI Q++SS+T
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVT 244
Query: 853 ASLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFX 1020
ASLR + L PYP P KAY CF
Sbjct: 245 ASLRFDG--ALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFE 302
Query: 1021 PXNXMXKXXPRXGXXM 1068
P M K PR G M
Sbjct: 303 PGAQMVKCDPRRGKYM 318
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical protein
F16D3.1 protein.
Length = 447
Score = 405 bits (996), Expect = e-113
Identities = 193/315 (61%), Positives = 230/315 (73%), Gaps = 4/315 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
+VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL + PTYT+LNRL+ Q+VSSITA
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITA 240
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXP 1023
SLR + L PYP P KAY CF P
Sbjct: 241 SLRFDG--ALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEP 298
Query: 1024 XNXMXKXXPRXGXXM 1068
+ M K PR G M
Sbjct: 299 GSQMVKCDPRNGKYM 313
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical protein
F32H2.9 protein.
Length = 464
Score = 398 bits (981), Expect = e-111
Identities = 194/313 (61%), Positives = 226/313 (72%), Gaps = 3/313 (0%)
Frame = +1
Query: 139 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 318
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 319 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 678
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 679 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 858
VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITAS
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITAS 247
Query: 859 LR---STAL*MWTSPSSXLTWCLTPYPXPTGHVRASXXXXKAYMNXXPXRNXXACFXPXN 1029
LR + + + ++ + + +P T S N ACF P
Sbjct: 248 LRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMT-HACFEPGY 306
Query: 1030 XMXKXXPRXGXXM 1068
M K PR G M
Sbjct: 307 QMVKCDPRRGKYM 319
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 867 DGALNVDLTEFXTNLVPYP 923
+GALNVDLTEF TNLVPYP
Sbjct: 251 EGALNVDLTEFQTNLVPYP 269
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 920 PRIXFPLVTYAPVXXXXRPT*TXXRAEXXXHASXPP 1027
PRI FPLVTYAP+ R + HA P
Sbjct: 269 PRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEP 304
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 396 bits (976), Expect = e-110
Identities = 180/243 (74%), Positives = 204/243 (83%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL + RPTY NLNR+I Q+VSSITA
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITA 237
Query: 856 SLR 864
SLR
Sbjct: 238 SLR 240
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 867 DGALNVDLTEFXTNLVPYP 923
DGALNVDL EF TNLVPYP
Sbjct: 242 DGALNVDLNEFQTNLVPYP 260
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical protein
ZK899.4 protein.
Length = 452
Score = 370 bits (910), Expect = e-102
Identities = 180/314 (57%), Positives = 217/314 (69%), Gaps = 4/314 (1%)
Frame = +1
Query: 139 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 318
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 319 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 498
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 678
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 679 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 858
VEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L +ERP+Y+NLNRLI Q+VSSITAS
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITAS 244
Query: 859 LRSTAL*MWTSPSSXLTWCLTPYP---XPTGHVRASXXXXKAYMNXXPXRN-XXACFXPX 1026
LR + L PYP P +A+ ++ CF
Sbjct: 245 LRFDG--ALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKA 302
Query: 1027 NXMXKXXPRXGXXM 1068
N M K P G M
Sbjct: 303 NQMVKCDPSAGKYM 316
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 355 bits (872), Expect = 5e-98
Identities = 174/292 (59%), Positives = 206/292 (70%), Gaps = 3/292 (1%)
Frame = +1
Query: 202 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 381
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 382 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 561
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 562 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAF 741
LLMERLS +YGKK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 742 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLR---STAL*MWTSPSSXLTW 912
MVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITASLR + + + ++ + +
Sbjct: 181 MVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPY 240
Query: 913 CLTPYPXPTGHVRASXXXXKAYMNXXPXRNXXACFXPXNXMXKXXPRXGXXM 1068
+P T S N ACF P M K PR G M
Sbjct: 241 PRIHFPLVTYAPLVSAERASHEQNTVSDMT-HACFEPGYQMVKCDPRRGKYM 291
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 867 DGALNVDLTEFXTNLVPYP 923
+GALNVDLTEF TNLVPYP
Sbjct: 223 EGALNVDLTEFQTNLVPYP 241
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 920 PRIXFPLVTYAPVXXXXRPT*TXXRAEXXXHASXPP 1027
PRI FPLVTYAP+ R + HA P
Sbjct: 241 PRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEP 276
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 222 bits (542), Expect = 5e-58
Identities = 106/243 (43%), Positives = 148/243 (60%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTT 238
Query: 856 SLR 864
LR
Sbjct: 239 CLR 241
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 219 bits (536), Expect = 2e-57
Identities = 105/243 (43%), Positives = 149/243 (61%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 856 SLR 864
LR
Sbjct: 239 CLR 241
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 219 bits (535), Expect = 3e-57
Identities = 116/312 (37%), Positives = 165/312 (52%), Gaps = 4/312 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP----XPTGHVRASXXXXKAYMNXXPXRNXXACFXP 1023
LR + L + P+P G + + Y CF
Sbjct: 239 CLRFPG--QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDA 296
Query: 1024 XNXMXKXXPRXG 1059
N M PR G
Sbjct: 297 KNMMAACDPRHG 308
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 219 bits (535), Expect = 3e-57
Identities = 116/312 (37%), Positives = 165/312 (52%), Gaps = 4/312 (1%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 856 SLRSTAL*MWTSPSSXLTWCLTPYP----XPTGHVRASXXXXKAYMNXXPXRNXXACFXP 1023
LR + L + P+P G + + Y CF
Sbjct: 239 CLRFPG--QLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDA 296
Query: 1024 XNXMXKXXPRXG 1059
N M PR G
Sbjct: 297 KNMMAACDPRHG 308
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 218 bits (533), Expect = 6e-57
Identities = 104/243 (42%), Positives = 149/243 (61%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 856 SLR 864
LR
Sbjct: 239 CLR 241
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 217 bits (530), Expect = 1e-56
Identities = 103/243 (42%), Positives = 145/243 (59%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTT 238
Query: 856 SLR 864
LR
Sbjct: 239 CLR 241
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 185 bits (451), Expect = 5e-47
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 1/244 (0%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 852
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 853 ASLR 864
R
Sbjct: 239 TFQR 242
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 185 bits (451), Expect = 5e-47
Identities = 99/244 (40%), Positives = 141/244 (57%), Gaps = 1/244 (0%)
Frame = +1
Query: 136 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 315
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 316 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 495
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 496 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 675
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSIT 852
VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L +S IT
Sbjct: 179 VVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGIT 238
Query: 853 ASLR 864
R
Sbjct: 239 TFQR 242
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 122 bits (295), Expect = 4e-28
Identities = 74/243 (30%), Positives = 124/243 (51%), Gaps = 4/243 (1%)
Frame = +1
Query: 148 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 327
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 328 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 498
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 675
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 856 SLR 864
R
Sbjct: 244 PYR 246
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 122 bits (295), Expect = 4e-28
Identities = 74/243 (30%), Positives = 124/243 (51%), Gaps = 4/243 (1%)
Frame = +1
Query: 148 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 327
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 328 AVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDR 498
AV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 499 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-A 675
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 676 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 855
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 856 SLR 864
R
Sbjct: 244 PYR 246
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.94
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 164 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 319
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 178 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 357
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 358 VDE 366
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 178 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 357
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 358 VDE 366
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 178 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 357
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 358 VDE 366
DE
Sbjct: 116 ADE 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,362,477
Number of Sequences: 27780
Number of extensions: 486561
Number of successful extensions: 1229
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3339026560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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